RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 PYCARD-AS1I3L0S3 204 aa4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 ACOT8O14734 319 aa4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 BCKDKO14874 412 aa4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 ZNF208O43345 1280 aa4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 DNPH1O43598 174 aa4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 TPST1O60507 370 aa4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 CIB2O75838 187 aa4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 NTN1O95631 604 aa4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 SERPINA1P01009 418 aa4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 MT-ND5P03915 603 aa4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 IFNW1P05000 195 aa4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 RFPL3SP0C7P2 107 aa4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 PNMTP11086 282 aa4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 GABRA1P14867 456 aa4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 CPN1P15169 458 aa4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 ACAA2P42765 397 aaKnown RBP4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 MAGEA5P43359 124 aa4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 IDH2P48735 452 aaKnown RBP4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 CCR4P51679 360 aa4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 TDGF1P3P51864 188 aa4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 POLR2HP52434 150 aaKnown RBP4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 CRYBA2P53672 197 aa4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 SMIM11AP58511 58 aa4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 CHRNB3Q05901 458 aa4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 SELENBP1Q13228 472 aa4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 QPRTQ15274 297 aa4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 TOMM20Q15388 145 aa4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 FAM98BQ52LJ0 330 aaKnown RBP4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 SOWAHCQ53LP3 525 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 OR5M10Q6IEU7 315 aa4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 C3orf33Q6P1S2 294 aa4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 ULK3Q6PHR2 472 aa4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 OLIG3Q7RTU3 272 aa4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 PIWIL3Q7Z3Z3 882 aaKnown RBP4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 CYP4Z1Q86W10 505 aa4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 CARM1Q86X55 608 aa4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 SMYD1Q8NB12 490 aa4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 GPR32P1Q8NGA4 272 aa4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 IPCEF1Q8WWN9 437 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 ABTB1Q969K4 478 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 SPSB4Q96A44 273 aa4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 SLC47A1Q96FL8 570 aa4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 MARS2Q96GW9 593 aaKnown RBP4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 SH3YL1Q96HL8 342 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 TPD52L3Q96J77 140 aa4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 SFXN2Q96NB2 322 aa4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 SORCS2Q96PQ0 1159 aa4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 SLC19A3Q9BZV2 496 aa4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 WDR12Q9GZL7 423 aaKnown RBP4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 ANKRD19PQ9H560 264 aa4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 EXO5Q9H790 373 aa4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 ASF1BQ9NVP2 202 aa4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 MRPS18AQ9NVS2 196 aaKnown RBP4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 NPIPA1Q9UND3 350 aa4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 USP22Q9UPT9 525 aa4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 POMPQ9Y244 141 aa4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 SH3GLB1Q9Y371 365 aa4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 FAM32AQ9Y421 112 aaKnown RBP4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 ZNF462Q96JM2 2506 aa4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 DIDO1Q9BTC0 2240 aaKnown RBP4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 PHF3Q92576 2039 aaKnown RBP4.92□□□□□ -1.62
HMGB1P44-201ENST00000508597 SPTBN1Q01082 2364 aaKnown RBP4.92□□□□□ -1.62
HMGB1P44-201ENST00000508597 A0A0B4J2E0 115 aa4.92□□□□□ -1.62
HMGB1P44-201ENST00000508597 A0A1B0GX12 115 aa4.92□□□□□ -1.62
HMGB1P44-201ENST00000508597 GAGE12BA1L429 117 aa4.92□□□□□ -1.62
HMGB1P44-201ENST00000508597 OR2M5A3KFT3 312 aa4.92□□□□□ -1.62
HMGB1P44-201ENST00000508597 TRAPPC13A5PLN9 417 aa4.92□□□□□ -1.62
HMGB1P44-201ENST00000508597 GAGE12HA6NDE8 117 aa4.92□□□□□ -1.62
HMGB1P44-201ENST00000508597 CLDN24A6NM45 220 aa4.92□□□□□ -1.62
HMGB1P44-201ENST00000508597 MARCH11A6NNE9 402 aa4.92□□□□□ -1.62
HMGB1P44-201ENST00000508597 ADAMDEC1O15204 470 aa4.92□□□□□ -1.62
HMGB1P44-201ENST00000508597 CHP2O43745 196 aa4.92□□□□□ -1.62
HMGB1P44-201ENST00000508597 OR2T1O43869 369 aa4.92□□□□□ -1.62
HMGB1P44-201ENST00000508597 WDR1O75083 606 aa4.92□□□□□ -1.62
HMGB1P44-201ENST00000508597 BCAS1O75363 584 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P44-201ENST00000508597 KRT36O76013 467 aa4.92□□□□□ -1.62
HMGB1P44-201ENST00000508597 PDE5AO76074 875 aa4.92□□□□□ -1.62
HMGB1P44-201ENST00000508597 OR5F1O95221 314 aa4.92□□□□□ -1.62
HMGB1P44-201ENST00000508597 ZNF682O95780 498 aa4.92□□□□□ -1.62
HMGB1P44-201ENST00000508597 EPPINO95925 133 aa4.92□□□□□ -1.62
HMGB1P44-201ENST00000508597 IGF2P01344 180 aa4.92□□□□□ -1.62
HMGB1P44-201ENST00000508597 OPN1SWP03999 348 aa4.92□□□□□ -1.62
HMGB1P44-201ENST00000508597 FABP3P05413 133 aa4.92□□□□□ -1.62
HMGB1P44-201ENST00000508597 GPIP06744 558 aa4.92□□□□□ -1.62
HMGB1P44-201ENST00000508597 GKN3PP0CG01 181 aa4.92□□□□□ -1.62
HMGB1P44-201ENST00000508597 NCK1P16333 377 aa4.92□□□□□ -1.62
HMGB1P44-201ENST00000508597 ZNF708P17019 499 aa4.92□□□□□ -1.62
HMGB1P44-201ENST00000508597 CXCR1P25024 350 aa4.92□□□□□ -1.62
HMGB1P44-201ENST00000508597 PSMA4P25789 261 aaKnown RBP4.92□□□□□ -1.62
HMGB1P44-201ENST00000508597 RYKP34925 604 aa4.92□□□□□ -1.62
HMGB1P44-201ENST00000508597 PTGS2P35354 604 aa4.92□□□□□ -1.62
HMGB1P44-201ENST00000508597 RFC3P40938 356 aa4.92□□□□□ -1.62
HMGB1P44-201ENST00000508597 MAGEA2P43356 314 aa4.92□□□□□ -1.62
HMGB1P44-201ENST00000508597 ZNF136P52737 540 aa4.92□□□□□ -1.62
HMGB1P44-201ENST00000508597 CASP6P55212 293 aa4.92□□□□□ -1.62
HMGB1P44-201ENST00000508597 B3GALT5-AS1P59052 145 aa4.92□□□□□ -1.62
HMGB1P44-201ENST00000508597 RPS3AP61247 264 aaKnown RBP4.92□□□□□ -1.62
HMGB1P44-201ENST00000508597 MS4A2Q01362 244 aa4.92□□□□□ -1.62
HMGB1P44-201ENST00000508597 PMP22Q01453 160 aa4.92□□□□□ -1.62
HMGB1P44-201ENST00000508597 ST3GAL3Q11203 375 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms