RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 KIR2DS2P43631 304 aa3.03□□□□□ -1.92
TOPBP1-206ENST00000508524 NUMBP49757 651 aa3.03□□□□□ -1.92
TOPBP1-206ENST00000508524 SRSF6Q13247 344 aaKnown RBP3.03□□□□□ -1.92
TOPBP1-206ENST00000508524 CDKN3Q16667 212 aa3.03□□□□□ -1.92
TOPBP1-206ENST00000508524 TMEM52BQ4KMG9 183 aa3.03□□□□□ -1.92
TOPBP1-206ENST00000508524 ZSCAN25Q6NSZ9 544 aa3.03□□□□□ -1.92
TOPBP1-206ENST00000508524 FAM43BQ6ZT52 329 aaPredicted RBP3.03□□□□□ -1.92
TOPBP1-206ENST00000508524 CDR2LQ86X02 465 aaPredicted RBP3.03□□□□□ -1.92
TOPBP1-206ENST00000508524 IQCA1Q86XH1 822 aa3.03□□□□□ -1.92
TOPBP1-206ENST00000508524 MARCH1Q8TCQ1 289 aa3.03□□□□□ -1.92
TOPBP1-206ENST00000508524 FGF11Q92914 225 aa3.03□□□□□ -1.92
TOPBP1-206ENST00000508524 MSANTD3Q96H12 275 aa3.03□□□□□ -1.92
TOPBP1-206ENST00000508524 CHRDL1Q9BU40 450 aa3.03□□□□□ -1.92
TOPBP1-206ENST00000508524 TBC1D10AQ9BXI6 508 aa3.03□□□□□ -1.92
TOPBP1-206ENST00000508524 ARGLU1Q9NWB6 273 aaPredicted RBP3.03□□□□□ -1.92
TOPBP1-206ENST00000508524 GDAP2Q9NXN4 497 aa3.03□□□□□ -1.92
TOPBP1-206ENST00000508524 MTRRQ9UBK8 725 aa3.03□□□□□ -1.92
TOPBP1-206ENST00000508524 RIMS3Q9UJD0 308 aa3.03□□□□□ -1.92
TOPBP1-206ENST00000508524 SCML2Q9UQR0 700 aa3.03□□□□□ -1.92
TOPBP1-206ENST00000508524 TGP01266 2768 aa3.03□□□□□ -1.92
TOPBP1-206ENST00000508524 CSPG4Q6UVK1 2322 aa3.03□□□□□ -1.92
TOPBP1-206ENST00000508524 MYLKQ15746 1914 aa3.03□□□□□ -1.92
TOPBP1-206ENST00000508524 FLNAP21333 2647 aaKnown RBP3.03□□□□□ -1.93
TOPBP1-206ENST00000508524 SF3B1O75533 1304 aaKnown RBP eCLIP3.02□□□□□ -1.933e-6■■■■■ 44.6
TOPBP1-206ENST00000508524 IGKV2D-24A0A075B6R9 120 aa3.02□□□□□ -1.93
TOPBP1-206ENST00000508524 TRBV6-6A0A0A6YYG2 114 aa3.02□□□□□ -1.93
TOPBP1-206ENST00000508524 A0A0D9SFI3 127 aa3.02□□□□□ -1.93
TOPBP1-206ENST00000508524 K7EQS6 105 aa3.02□□□□□ -1.93
TOPBP1-206ENST00000508524 EFNA2O43921 213 aa3.02□□□□□ -1.93
TOPBP1-206ENST00000508524 NPIPB7O75200 414 aa3.02□□□□□ -1.93
TOPBP1-206ENST00000508524 PTPN6P29350 595 aa3.02□□□□□ -1.93
TOPBP1-206ENST00000508524 NTSP30990 170 aa3.02□□□□□ -1.93
TOPBP1-206ENST00000508524 NUDT1P36639 197 aa3.02□□□□□ -1.93
TOPBP1-206ENST00000508524 ZNF33AQ06730 810 aa3.02□□□□□ -1.93
TOPBP1-206ENST00000508524 TWF1Q12792 350 aa3.02□□□□□ -1.93
TOPBP1-206ENST00000508524 RPA4Q13156 261 aa3.02□□□□□ -1.93
TOPBP1-206ENST00000508524 DNAJC3Q13217 504 aa3.02□□□□□ -1.93
TOPBP1-206ENST00000508524 ALX1Q15699 326 aa3.02□□□□□ -1.93
TOPBP1-206ENST00000508524 HES3Q5TGS1 186 aa3.02□□□□□ -1.93
TOPBP1-206ENST00000508524 CATSPER4Q7RTX7 472 aa3.02□□□□□ -1.93
TOPBP1-206ENST00000508524 CCDC91Q7Z6B0 441 aa3.02□□□□□ -1.93
TOPBP1-206ENST00000508524 TPRX1Q8N7U7 411 aa3.02□□□□□ -1.93
TOPBP1-206ENST00000508524 NEK11Q8NG66 645 aa3.02□□□□□ -1.93
TOPBP1-206ENST00000508524 OR2T33Q8NG76 320 aa3.02□□□□□ -1.93
TOPBP1-206ENST00000508524 OR9A1PQ8NGU1 263 aa3.02□□□□□ -1.93
TOPBP1-206ENST00000508524 NEIL3Q8TAT5 605 aa3.02□□□□□ -1.93
TOPBP1-206ENST00000508524 RSPH1Q8WYR4 309 aa3.02□□□□□ -1.93
TOPBP1-206ENST00000508524 CPB2Q96IY4 423 aa3.02□□□□□ -1.93
TOPBP1-206ENST00000508524 MBOAT4Q96T53 435 aa3.02□□□□□ -1.93
TOPBP1-206ENST00000508524 RTBDNQ9BSG5 229 aaPredicted RBP3.02□□□□□ -1.93
TOPBP1-206ENST00000508524 TMEM121Q9BTD3 319 aa3.02□□□□□ -1.93
TOPBP1-206ENST00000508524 CHIAQ9BZP6 476 aa3.02□□□□□ -1.93
TOPBP1-206ENST00000508524 NTN4Q9HB63 628 aa3.02□□□□□ -1.93
TOPBP1-206ENST00000508524 MID1IP1Q9NPA3 183 aa3.02□□□□□ -1.93
TOPBP1-206ENST00000508524 ZNF302Q9NR11 478 aa3.02□□□□□ -1.93
TOPBP1-206ENST00000508524 SMC3Q9UQE7 1217 aa3.02□□□□□ -1.93
TOPBP1-206ENST00000508524 WDR45Q9Y484 360 aa3.02□□□□□ -1.93
TOPBP1-206ENST00000508524 GMPPBQ9Y5P6 360 aa3.02□□□□□ -1.93
TOPBP1-206ENST00000508524 ZNF469Q96JG9 3925 aaPredicted RBP3.02□□□□□ -1.93
TOPBP1-206ENST00000508524 NOTCH1P46531 2555 aa3.01□□□□□ -1.93
TOPBP1-206ENST00000508524 IGLV3-22A0A075B6J6 115 aa3.01□□□□□ -1.93
TOPBP1-206ENST00000508524 IGHV1OR15-9A0A0B4J2B8 117 aa3.01□□□□□ -1.93
TOPBP1-206ENST00000508524 ESYT2A0FGR8 921 aa3.01□□□□□ -1.93
TOPBP1-206ENST00000508524 E9PMD0 336 aa3.01□□□□□ -1.93
TOPBP1-206ENST00000508524 H3BTX0 84 aa3.01□□□□□ -1.93
TOPBP1-206ENST00000508524 K7N7A8 449 aa3.01□□□□□ -1.93
TOPBP1-206ENST00000508524 SGK494L7N484 410 aa3.01□□□□□ -1.93
TOPBP1-206ENST00000508524 PRRG1O14668 218 aa3.01□□□□□ -1.93
TOPBP1-206ENST00000508524 CASKO14936 926 aa3.01□□□□□ -1.93
TOPBP1-206ENST00000508524 B4GALT5O43286 388 aa3.01□□□□□ -1.93
TOPBP1-206ENST00000508524 ZNF264O43296 627 aa3.01□□□□□ -1.93
TOPBP1-206ENST00000508524 ZNF44P15621 663 aa3.01□□□□□ -1.93
TOPBP1-206ENST00000508524 GABRG2P18507 467 aa3.01□□□□□ -1.93
TOPBP1-206ENST00000508524 AQP1P29972 269 aa3.01□□□□□ -1.93
TOPBP1-206ENST00000508524 OPRD1P41143 372 aa3.01□□□□□ -1.93
TOPBP1-206ENST00000508524 UQCRFS1P47985 274 aa3.01□□□□□ -1.93
TOPBP1-206ENST00000508524 ARPP19P56211 112 aa3.01□□□□□ -1.93
TOPBP1-206ENST00000508524 ARF5P84085 180 aa3.01□□□□□ -1.93
TOPBP1-206ENST00000508524 TFDP1Q14186 410 aa3.01□□□□□ -1.93
TOPBP1-206ENST00000508524 CFAP221Q4G0U5 840 aa3.01□□□□□ -1.93
TOPBP1-206ENST00000508524 SLC8B1Q6J4K2 584 aa3.01□□□□□ -1.93
TOPBP1-206ENST00000508524 HSD11B1LQ7Z5J1 315 aa3.01□□□□□ -1.93
TOPBP1-206ENST00000508524 TMEM150AQ86TG1 271 aa3.01□□□□□ -1.93
TOPBP1-206ENST00000508524 ZNF540Q8NDQ6 660 aa3.01□□□□□ -1.93
TOPBP1-206ENST00000508524 STKLD1Q8NE28 680 aa3.01□□□□□ -1.93
TOPBP1-206ENST00000508524 EXOC6Q8TAG9 804 aa3.01□□□□□ -1.93
TOPBP1-206ENST00000508524 BLOC1S5Q8TDH9 187 aa3.01□□□□□ -1.93
TOPBP1-206ENST00000508524 CTRCQ99895 268 aa3.01□□□□□ -1.93
TOPBP1-206ENST00000508524 P2RY13Q9BPV8 354 aa3.01□□□□□ -1.93
TOPBP1-206ENST00000508524 WRAP53Q9BUR4 548 aaKnown RBP3.01□□□□□ -1.93
TOPBP1-206ENST00000508524 GCOM2Q9BZD3 368 aaPredicted RBP3.01□□□□□ -1.93
TOPBP1-206ENST00000508524 KAT8Q9H7Z6 458 aaKnown RBP3.01□□□□□ -1.93
TOPBP1-206ENST00000508524 ZDHHC11Q9H8X9 412 aa3.01□□□□□ -1.93
TOPBP1-206ENST00000508524 COG4Q9H9E3 785 aa3.01□□□□□ -1.93
TOPBP1-206ENST00000508524 GPN2Q9H9Y4 310 aaPredicted RBP3.01□□□□□ -1.93
TOPBP1-206ENST00000508524 MMP17Q9ULZ9 603 aa3.01□□□□□ -1.93
TOPBP1-206ENST00000508524 UBQLN1Q9UMX0 589 aaKnown RBP3.01□□□□□ -1.93
TOPBP1-206ENST00000508524 EIF3LQ9Y262 564 aaKnown RBP3.01□□□□□ -1.93
TOPBP1-206ENST00000508524 IFT52Q9Y366 437 aa3.01□□□□□ -1.93
TOPBP1-206ENST00000508524 CEP192Q8TEP8 1941 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms