RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 ZNF534Q76KX8 674 aa6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 ZAR1Q86SH2 424 aa6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 LRRC18Q8N456 261 aa6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 OR9Q2Q8NGE9 314 aa6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 OR10V1Q8NGI7 309 aa6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 OR9A2Q8NGT5 310 aa6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 OR2Y1Q8NGV0 311 aa6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 SLC38A5Q8WUX1 472 aa6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 RORBQ92753 470 aa6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 SNAPC3Q92966 411 aa6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 LOXL4Q96JB6 756 aa6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 ADGRA2Q96PE1 1338 aa6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 FRG2BQ96QU4 278 aa6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 ATF6BQ99941 703 aa6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 CUTCQ9NTM9 273 aa6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 FARSAQ9Y285 508 aaKnown RBP6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 KLHDC2Q9Y2U9 406 aa6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 IRAK3Q9Y616 596 aa6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 RTL9Q8NET4 1388 aa6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 CASTOR2A6NHX0 329 aa6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 F5H5T6 163 aa6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 PRKAB2O43741 272 aa6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 CREB1P16220 341 aa6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 P2RY1P47900 373 aa6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 RPS7P62081 194 aaKnown RBP6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 FZD5Q13467 585 aa6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 SPHARQ15513 63 aa6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 PGGHGQ32M88 737 aa6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 ARMCX4Q5H9R4 360 aa6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 ZNF790Q6PG37 636 aa6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 LINC00336Q6ZUF6 198 aa6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 APTXQ7Z2E3 356 aaKnown RBP6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 STX19Q8N4C7 294 aa6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 GCSAMQ8N6F7 178 aa6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 PNPLA1Q8N8W4 532 aa6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 HSD17B11Q8NBQ5 300 aa6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 OR4F6Q8NGB9 312 aa6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 GCDHQ92947 438 aaPredicted RBP6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 CENPNQ96H22 339 aaPredicted RBP6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 CDCA3Q99618 268 aaPredicted RBP6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 MRPS26Q9BYN8 205 aaKnown RBP6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 UBXN6Q9BZV1 441 aa6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 TMEM39BQ9GZU3 492 aa6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 LHPPQ9H008 270 aa6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 TUBB1Q9H4B7 451 aa6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 Q9H8V8 135 aa6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 GSN-AS1Q9NRJ2 163 aa6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 C2orf42Q9NWW7 574 aa6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 IL36GQ9NZH8 169 aa6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 TCAF1Q9Y4C2 921 aa6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 SRCAPQ6ZRS2 3230 aa6.71□□□□□ -1.34
PDGFRA-206ENST00000508170 MYMKA6NI61 221 aa6.71□□□□□ -1.34
PDGFRA-206ENST00000508170 SLC22A20A6NK97 555 aa6.71□□□□□ -1.34
PDGFRA-206ENST00000508170 E5RGE8 158 aa6.71□□□□□ -1.34
PDGFRA-206ENST00000508170 H3BMH7 237 aa6.71□□□□□ -1.34
PDGFRA-206ENST00000508170 H3BTX0 84 aa6.71□□□□□ -1.34
PDGFRA-206ENST00000508170 CXCR6O00574 342 aa6.71□□□□□ -1.34
PDGFRA-206ENST00000508170 ARPC1BO15143 372 aaKnown RBP6.71□□□□□ -1.34
PDGFRA-206ENST00000508170 MSH4O15457 936 aa6.71□□□□□ -1.34
PDGFRA-206ENST00000508170 SEC24AO95486 1093 aa6.71□□□□□ -1.34
PDGFRA-206ENST00000508170 IFNA2P01563 188 aa6.71□□□□□ -1.34
PDGFRA-206ENST00000508170 C2P06681 752 aa6.71□□□□□ -1.34
PDGFRA-206ENST00000508170 RFPL3SP0C7P2 107 aa6.71□□□□□ -1.34
PDGFRA-206ENST00000508170 SLC19A1P41440 591 aa6.71□□□□□ -1.34
PDGFRA-206ENST00000508170 FOXL1Q12952 345 aa6.71□□□□□ -1.34
PDGFRA-206ENST00000508170 MAD2L1BPQ15013 274 aaPredicted RBP6.71□□□□□ -1.34
PDGFRA-206ENST00000508170 NKPD1Q17RQ9 610 aa6.71□□□□□ -1.34
PDGFRA-206ENST00000508170 DEFB115Q30KQ5 88 aa6.71□□□□□ -1.34
PDGFRA-206ENST00000508170 MIIPQ5JXC2 388 aa6.71□□□□□ -1.34
PDGFRA-206ENST00000508170 PAQR6Q6TCH4 344 aa6.71□□□□□ -1.34
PDGFRA-206ENST00000508170 TMBIM1Q969X1 311 aa6.71□□□□□ -1.34
PDGFRA-206ENST00000508170 MYLPFQ96A32 169 aa6.71□□□□□ -1.34
PDGFRA-206ENST00000508170 C18orf25Q96B23 403 aaPredicted RBP6.71□□□□□ -1.34
PDGFRA-206ENST00000508170 EXOSC8Q96B26 276 aaKnown RBP6.71□□□□□ -1.34
PDGFRA-206ENST00000508170 PEX11GQ96HA9 241 aa6.71□□□□□ -1.34
PDGFRA-206ENST00000508170 MS4A14Q96JA4 679 aa6.71□□□□□ -1.34
PDGFRA-206ENST00000508170 TMEM56Q96MV1 263 aa6.71□□□□□ -1.34
PDGFRA-206ENST00000508170 PFDN5Q99471 154 aa6.71□□□□□ -1.34
PDGFRA-206ENST00000508170 SCAND2PQ9GZW5 306 aaPredicted RBP6.71□□□□□ -1.34
PDGFRA-206ENST00000508170 BCAS3Q9H6U6 928 aa6.71□□□□□ -1.34
PDGFRA-206ENST00000508170 ISYNA1Q9NPH2 558 aa6.71□□□□□ -1.34
PDGFRA-206ENST00000508170 NOX4Q9NPH5 578 aa6.71□□□□□ -1.34
PDGFRA-206ENST00000508170 HINT3Q9NQE9 182 aaKnown RBP6.71□□□□□ -1.34
PDGFRA-206ENST00000508170 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.71□□□□□ -1.34
PDGFRA-206ENST00000508170 NSG2Q9Y328 171 aa6.71□□□□□ -1.34
PDGFRA-206ENST00000508170 TMEM56-RWDD3S4R434 201 aa6.71□□□□□ -1.34
PDGFRA-206ENST00000508170 SLIT3O75094 1523 aa6.71□□□□□ -1.34
PDGFRA-206ENST00000508170 ADGRA3Q8IWK6 1321 aa6.71□□□□□ -1.34
PDGFRA-206ENST00000508170 ZC3H12DA2A288 527 aaKnown RBP6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 B5MCH6 92 aa6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 M0R082 166 aa6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 PRYO14603 147 aa6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 ESR1P03372 595 aa6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 RPL5P46777 297 aaKnown RBP6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 LBX1P52954 281 aa6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 FPGSQ05932 587 aa6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 PRTGQ2VWP7 1150 aa6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 RBM48Q5RL73 367 aaKnown RBP6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 RTL6Q6ICC9 239 aa6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 SSX6Q7RTT6 188 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms