RNA–Protein interactions for RNA: ENST00000508049.1

CLOCK-207, Transcript of clock circadian regulator, humanhuman

TSL 3

Gene CLOCK, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-207ENST00000508049 CAMK2N2Q96S95 79 aa0.8□□□□□ -2.28
CLOCK-207ENST00000508049 WDR76Q9H967 626 aa0.8□□□□□ -2.28
CLOCK-207ENST00000508049 CYP39A1Q9NYL5 469 aa0.8□□□□□ -2.28
CLOCK-207ENST00000508049 ABCC4O15439 1325 aa0.8□□□□□ -2.28
CLOCK-207ENST00000508049 TENM3Q9P273 2699 aa0.8□□□□□ -2.28
CLOCK-207ENST00000508049 CACNA1DQ01668 2161 aa0.79□□□□□ -2.28
CLOCK-207ENST00000508049 CXCL13O43927 109 aa0.79□□□□□ -2.28
CLOCK-207ENST00000508049 NPR2P20594 1047 aa0.79□□□□□ -2.28
CLOCK-207ENST00000508049 ATP5DP30049 168 aa0.79□□□□□ -2.28
CLOCK-207ENST00000508049 PTGFRP43088 359 aa0.79□□□□□ -2.28
CLOCK-207ENST00000508049 GDI2P50395 445 aaKnown RBP0.79□□□□□ -2.28
CLOCK-207ENST00000508049 LINC01620Q4KN68 170 aa0.79□□□□□ -2.28
CLOCK-207ENST00000508049 ZSCAN5AQ9BUG6 496 aa0.79□□□□□ -2.28
CLOCK-207ENST00000508049 ATG10Q9H0Y0 220 aa0.79□□□□□ -2.28
CLOCK-207ENST00000508049 DHX33Q9H6R0 707 aaKnown RBP0.79□□□□□ -2.28
CLOCK-207ENST00000508049 RANBP3Q9H6Z4 567 aaPredicted RBP0.79□□□□□ -2.28
CLOCK-207ENST00000508049 YY1AP1Q9H869 796 aa0.79□□□□□ -2.28
CLOCK-207ENST00000508049 TBK1Q9UHD2 729 aa0.79□□□□□ -2.28
CLOCK-207ENST00000508049 FOXJ3Q9UPW0 622 aa0.79□□□□□ -2.28
CLOCK-207ENST00000508049 STRAPQ9Y3F4 350 aaKnown RBP0.79□□□□□ -2.28
CLOCK-207ENST00000508049 CIB4A0PJX0 185 aa0.78□□□□□ -2.28
CLOCK-207ENST00000508049 TRDCB7Z8K6 153 aa0.78□□□□□ -2.28
CLOCK-207ENST00000508049 RS1O15537 224 aa0.78□□□□□ -2.28
CLOCK-207ENST00000508049 VEGFDO43915 354 aa0.78□□□□□ -2.28
CLOCK-207ENST00000508049 IGHDP01880 384 aa0.78□□□□□ -2.28
CLOCK-207ENST00000508049 CA3P07451 260 aa0.78□□□□□ -2.28
CLOCK-207ENST00000508049 RRASP10301 218 aa0.78□□□□□ -2.28
CLOCK-207ENST00000508049 COPB2P35606 906 aa0.78□□□□□ -2.28
CLOCK-207ENST00000508049 ARF5P84085 180 aa0.78□□□□□ -2.28
CLOCK-207ENST00000508049 GABPB1Q06547 395 aaPredicted RBP0.78□□□□□ -2.28
CLOCK-207ENST00000508049 ZNF235Q14590 738 aa0.78□□□□□ -2.28
CLOCK-207ENST00000508049 SAXO2Q658L1 398 aa0.78□□□□□ -2.28
CLOCK-207ENST00000508049 AFTPHQ6ULP2 937 aa0.78□□□□□ -2.28
CLOCK-207ENST00000508049 STRADAQ7RTN6 431 aa0.78□□□□□ -2.28
CLOCK-207ENST00000508049 TM4SF18Q96CE8 201 aa0.78□□□□□ -2.28
CLOCK-207ENST00000508049 TSSK3Q96PN8 268 aa0.78□□□□□ -2.28
CLOCK-207ENST00000508049 MRPL45Q9BRJ2 306 aaKnown RBP0.78□□□□□ -2.28
CLOCK-207ENST00000508049 FRMD8P1Q9BZ68 369 aaPredicted RBP0.78□□□□□ -2.28
CLOCK-207ENST00000508049 SGK2Q9HBY8 427 aa0.78□□□□□ -2.28
CLOCK-207ENST00000508049 FBXO6Q9NRD1 293 aaPredicted RBP0.78□□□□□ -2.28
CLOCK-207ENST00000508049 AGPAT5Q9NUQ2 364 aa0.78□□□□□ -2.28
CLOCK-207ENST00000508049 CWC25Q9NXE8 425 aaPredicted RBP0.78□□□□□ -2.28
CLOCK-207ENST00000508049 SEC14L3Q9UDX4 400 aa0.78□□□□□ -2.28
CLOCK-207ENST00000508049 WDR62O43379 1518 aa0.78□□□□□ -2.28
CLOCK-207ENST00000508049 ARHGAP42A6NI28 874 aa0.77□□□□□ -2.29
CLOCK-207ENST00000508049 G3V4G9 280 aa0.77□□□□□ -2.29
CLOCK-207ENST00000508049 RHOBTB1O94844 696 aa0.77□□□□□ -2.29
CLOCK-207ENST00000508049 GABARAPO95166 117 aa0.77□□□□□ -2.29
CLOCK-207ENST00000508049 FOLR1P15328 257 aa0.77□□□□□ -2.29
CLOCK-207ENST00000508049 PGCP20142 388 aa0.77□□□□□ -2.29
CLOCK-207ENST00000508049 RDXP35241 583 aaKnown RBP0.77□□□□□ -2.29
CLOCK-207ENST00000508049 SOX6P35712 828 aa0.77□□□□□ -2.29
CLOCK-207ENST00000508049 NCBP2P52298 156 aaKnown RBP eCLIP0.77□□□□□ -2.29
CLOCK-207ENST00000508049 ACVR1Q04771 509 aa0.77□□□□□ -2.29
CLOCK-207ENST00000508049 ZFP1Q6P2D0 407 aa0.77□□□□□ -2.29
CLOCK-207ENST00000508049 LINC00173Q6ZV60 143 aa0.77□□□□□ -2.29
CLOCK-207ENST00000508049 LHFPL4Q7Z7J7 247 aa0.77□□□□□ -2.29
CLOCK-207ENST00000508049 ZNF546Q86UE3 836 aa0.77□□□□□ -2.29
CLOCK-207ENST00000508049 CBWD2Q8IUF1 395 aa0.77□□□□□ -2.29
CLOCK-207ENST00000508049 CCDC170Q8IYT3 715 aa0.77□□□□□ -2.29
CLOCK-207ENST00000508049 ST20-AS1Q8NBB2 130 aa0.77□□□□□ -2.29
CLOCK-207ENST00000508049 MINDY2Q8NBR6 621 aa0.77□□□□□ -2.29
CLOCK-207ENST00000508049 ZNF680Q8NEM1 530 aa0.77□□□□□ -2.29
CLOCK-207ENST00000508049 OR52E1Q8NGJ3 308 aa0.77□□□□□ -2.29
CLOCK-207ENST00000508049 LINC01560Q8TB33 94 aa0.77□□□□□ -2.29
CLOCK-207ENST00000508049 URGCPQ8TCY9 931 aa0.77□□□□□ -2.29
CLOCK-207ENST00000508049 MYLPFQ96A32 169 aa0.77□□□□□ -2.29
CLOCK-207ENST00000508049 CREB3L1Q96BA8 519 aa0.77□□□□□ -2.29
CLOCK-207ENST00000508049 C12orf66Q96MD2 445 aa0.77□□□□□ -2.29
CLOCK-207ENST00000508049 TESK2Q96S53 571 aa0.77□□□□□ -2.29
CLOCK-207ENST00000508049 NXF5Q9H1B4 397 aaKnown RBP0.77□□□□□ -2.29
CLOCK-207ENST00000508049 CARMIL1Q5VZK9 1371 aa0.76□□□□□ -2.29
CLOCK-207ENST00000508049 IGHV3OR16-8A0A075B7F1 116 aa0.76□□□□□ -2.29
CLOCK-207ENST00000508049 ZNF98A6NK75 572 aa0.76□□□□□ -2.29
CLOCK-207ENST00000508049 LOC110117498-PIK3R3F6TDL0 507 aa0.76□□□□□ -2.29
CLOCK-207ENST00000508049 GZMMP51124 257 aa0.76□□□□□ -2.29
CLOCK-207ENST00000508049 PKNOX1P55347 436 aa0.76□□□□□ -2.29
CLOCK-207ENST00000508049 PDIA2Q13087 525 aaKnown RBP0.76□□□□□ -2.29
CLOCK-207ENST00000508049 GINS1Q14691 196 aa0.76□□□□□ -2.29
CLOCK-207ENST00000508049 OR2G6Q5TZ20 316 aa0.76□□□□□ -2.29
CLOCK-207ENST00000508049 OR6B2Q6IFH4 312 aa0.76□□□□□ -2.29
CLOCK-207ENST00000508049 CENPUQ71F23 418 aa0.76□□□□□ -2.29
CLOCK-207ENST00000508049 RNF148Q8N7C7 305 aa0.76□□□□□ -2.29
CLOCK-207ENST00000508049 OR5M1Q8NGP8 315 aa0.76□□□□□ -2.29
CLOCK-207ENST00000508049 DESI2Q9BSY9 194 aa0.76□□□□□ -2.29
CLOCK-207ENST00000508049 CAPS2Q9BXY5 557 aa0.76□□□□□ -2.29
CLOCK-207ENST00000508049 GSDMCQ9BYG8 508 aa0.76□□□□□ -2.29
CLOCK-207ENST00000508049 YAE1D1Q9NRH1 226 aa0.76□□□□□ -2.29
CLOCK-207ENST00000508049 XCL2Q9UBD3 114 aa0.76□□□□□ -2.29
CLOCK-207ENST00000508049 FLG2Q5D862 2391 aaPredicted RBP0.75□□□□□ -2.29
CLOCK-207ENST00000508049 CENPJQ9HC77 1338 aaPredicted RBP0.75□□□□□ -2.29
CLOCK-207ENST00000508049 IGHV3-74A0A0B4J1X5 117 aa0.75□□□□□ -2.29
CLOCK-207ENST00000508049 DDX39AO00148 427 aaKnown RBP0.75□□□□□ -2.29
CLOCK-207ENST00000508049 TAPBPO15533 448 aa0.75□□□□□ -2.29
CLOCK-207ENST00000508049 OPN1MWP04001 364 aa0.75□□□□□ -2.29
CLOCK-207ENST00000508049 BCHEP06276 602 aa0.75□□□□□ -2.29
CLOCK-207ENST00000508049 OPN1MW2P0DN77 364 aa0.75□□□□□ -2.29
CLOCK-207ENST00000508049 OPN1MW3P0DN78 364 aa0.75□□□□□ -2.29
CLOCK-207ENST00000508049 TPSB2P20231 275 aa0.75□□□□□ -2.29
CLOCK-207ENST00000508049 COX5AP20674 150 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms