RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 FMO3P31513 532 aa2.27□□□□□ -2.05
LSM6-205ENST00000507449 DRD3P35462 400 aa2.27□□□□□ -2.05
LSM6-205ENST00000507449 NUDT1P36639 197 aa2.27□□□□□ -2.05
LSM6-205ENST00000507449 VHLP40337 213 aa2.27□□□□□ -2.05
LSM6-205ENST00000507449 ACTR3P61158 418 aa2.27□□□□□ -2.05
LSM6-205ENST00000507449 MRPL28Q13084 256 aaKnown RBP2.27□□□□□ -2.05
LSM6-205ENST00000507449 PDIA2Q13087 525 aaKnown RBP2.27□□□□□ -2.05
LSM6-205ENST00000507449 KIAA0087Q14695 138 aa2.27□□□□□ -2.05
LSM6-205ENST00000507449 GNMTQ14749 295 aa2.27□□□□□ -2.05
LSM6-205ENST00000507449 IMMTQ16891 758 aaKnown RBP2.27□□□□□ -2.05
LSM6-205ENST00000507449 BOLA3Q53S33 107 aa2.27□□□□□ -2.05
LSM6-205ENST00000507449 ZNF530Q6P9A1 599 aaPredicted RBP2.27□□□□□ -2.05
LSM6-205ENST00000507449 SLC25A48Q6ZT89 311 aaKnown RBP2.27□□□□□ -2.05
LSM6-205ENST00000507449 COX15Q7KZN9 410 aa2.27□□□□□ -2.05
LSM6-205ENST00000507449 SLC22A9Q8IVM8 553 aa2.27□□□□□ -2.05
LSM6-205ENST00000507449 SLC34A3Q8N130 599 aa2.27□□□□□ -2.05
LSM6-205ENST00000507449 ZNF433Q8N7K0 673 aaPredicted RBP2.27□□□□□ -2.05
LSM6-205ENST00000507449 OR4F6Q8NGB9 312 aa2.27□□□□□ -2.05
LSM6-205ENST00000507449 PYROXD1Q8WU10 500 aa2.27□□□□□ -2.05
LSM6-205ENST00000507449 NDRG1Q92597 394 aaKnown RBP2.27□□□□□ -2.05
LSM6-205ENST00000507449 SMARCD2Q92925 531 aa2.27□□□□□ -2.05
LSM6-205ENST00000507449 NRTNQ99748 197 aa2.27□□□□□ -2.05
LSM6-205ENST00000507449 SLC39A3Q9BRY0 314 aa2.27□□□□□ -2.05
LSM6-205ENST00000507449 RIOK2Q9BVS4 552 aaKnown RBP2.27□□□□□ -2.05
LSM6-205ENST00000507449 PLGRKTQ9HBL7 147 aa2.27□□□□□ -2.05
LSM6-205ENST00000507449 EML4Q9HC35 981 aaKnown RBP2.27□□□□□ -2.05
LSM6-205ENST00000507449 NT5MQ9NPB1 228 aa2.27□□□□□ -2.05
LSM6-205ENST00000507449 KCNIP1Q9NZI2 227 aa2.27□□□□□ -2.05
LSM6-205ENST00000507449 ADAM22Q9P0K1 906 aa2.27□□□□□ -2.05
LSM6-205ENST00000507449 PISDQ9UG56 409 aa2.27□□□□□ -2.05
LSM6-205ENST00000507449 PPIAL4EA0A075B759 164 aa2.26□□□□□ -2.05
LSM6-205ENST00000507449 A0A0G2JN53 185 aa2.26□□□□□ -2.05
LSM6-205ENST00000507449 XKRY2A2RUG3 117 aa2.26□□□□□ -2.05
LSM6-205ENST00000507449 PINLYPA6NC86 204 aa2.26□□□□□ -2.05
LSM6-205ENST00000507449 UPK3AO75631 287 aa2.26□□□□□ -2.05
LSM6-205ENST00000507449 TMEM50AO95807 157 aa2.26□□□□□ -2.05
LSM6-205ENST00000507449 CST1P01037 141 aa2.26□□□□□ -2.05
LSM6-205ENST00000507449 IGHV2-5P01817 119 aa2.26□□□□□ -2.05
LSM6-205ENST00000507449 IGHV4-34P06331 123 aa2.26□□□□□ -2.05
LSM6-205ENST00000507449 UQCRFS1P1P0C7P4 283 aa2.26□□□□□ -2.05
LSM6-205ENST00000507449 PPIAL4FP0DN26 164 aa2.26□□□□□ -2.05
LSM6-205ENST00000507449 NCF2P19878 526 aaPredicted RBP2.26□□□□□ -2.05
LSM6-205ENST00000507449 KITLGP21583 273 aa2.26□□□□□ -2.05
LSM6-205ENST00000507449 HNRNPH3P31942 346 aaKnown RBP2.26□□□□□ -2.05
LSM6-205ENST00000507449 FDFT1P37268 417 aa2.26□□□□□ -2.05
LSM6-205ENST00000507449 EPS15P42566 896 aa2.26□□□□□ -2.05
LSM6-205ENST00000507449 YAP1P46937 504 aaKnown RBP2.26□□□□□ -2.05
LSM6-205ENST00000507449 GYG1P46976 350 aa2.26□□□□□ -2.05
LSM6-205ENST00000507449 NPBWR2P48146 333 aa2.26□□□□□ -2.05
LSM6-205ENST00000507449 KRTAP12-2P59991 146 aa2.26□□□□□ -2.05
LSM6-205ENST00000507449 CYTH1Q15438 398 aa2.26□□□□□ -2.05
LSM6-205ENST00000507449 IGFL2Q6UWQ7 119 aa2.26□□□□□ -2.05
LSM6-205ENST00000507449 LRRC31Q6UY01 552 aa2.26□□□□□ -2.05
LSM6-205ENST00000507449 ZYG11AQ6WRX3 759 aa2.26□□□□□ -2.05
LSM6-205ENST00000507449 CDR2LQ86X02 465 aaPredicted RBP2.26□□□□□ -2.05
LSM6-205ENST00000507449 NBPF5PQ86XG9 351 aaPredicted RBP2.26□□□□□ -2.05
LSM6-205ENST00000507449 CDH26Q8IXH8 852 aa2.26□□□□□ -2.05
LSM6-205ENST00000507449 FAM71E2Q8N5Q1 922 aa2.26□□□□□ -2.05
LSM6-205ENST00000507449 FNDC5Q8NAU1 212 aa2.26□□□□□ -2.05
LSM6-205ENST00000507449 NPBQ8NG41 125 aa2.26□□□□□ -2.05
LSM6-205ENST00000507449 OR2M2Q96R28 347 aa2.26□□□□□ -2.05
LSM6-205ENST00000507449 PELOQ9BRX2 385 aaKnown RBP2.26□□□□□ -2.05
LSM6-205ENST00000507449 NANOGQ9H9S0 305 aa2.26□□□□□ -2.05
LSM6-205ENST00000507449 SIAEQ9HAT2 523 aa2.26□□□□□ -2.05
LSM6-205ENST00000507449 ZFP14Q9HCL3 533 aa2.26□□□□□ -2.05
LSM6-205ENST00000507449 ADAP2Q9NPF8 381 aa2.26□□□□□ -2.05
LSM6-205ENST00000507449 CALYQ9NYX4 217 aa2.26□□□□□ -2.05
LSM6-205ENST00000507449 XCL2Q9UBD3 114 aa2.26□□□□□ -2.05
LSM6-205ENST00000507449 ZNF225Q9UK10 706 aa2.26□□□□□ -2.05
LSM6-205ENST00000507449 RRP15Q9Y3B9 282 aaKnown RBP2.26□□□□□ -2.05
LSM6-205ENST00000507449 RLFQ13129 1914 aa2.26□□□□□ -2.05
LSM6-205ENST00000507449 LTBP1Q14766 1721 aa2.25□□□□□ -2.05
LSM6-205ENST00000507449 KANK1Q14678 1352 aa2.25□□□□□ -2.05
LSM6-205ENST00000507449 COL16A1Q07092 1604 aaPredicted RBP2.25□□□□□ -2.05
LSM6-205ENST00000507449 CDHR2Q9BYE9 1310 aa2.25□□□□□ -2.05
LSM6-205ENST00000507449 ERVV-1B6SEH8 477 aa2.25□□□□□ -2.05
LSM6-205ENST00000507449 GOLGA8SH3BPF8 625 aa2.25□□□□□ -2.05
LSM6-205ENST00000507449 UBXN8O00124 270 aa2.25□□□□□ -2.05
LSM6-205ENST00000507449 FGF1P05230 155 aa2.25□□□□□ -2.05
LSM6-205ENST00000507449 SLC2A3P11169 496 aa2.25□□□□□ -2.05
LSM6-205ENST00000507449 TDGF1P13385 188 aa2.25□□□□□ -2.05
LSM6-205ENST00000507449 ABOP16442 354 aa2.25□□□□□ -2.05
LSM6-205ENST00000507449 MDKP21741 143 aaPredicted RBP2.25□□□□□ -2.05
LSM6-205ENST00000507449 CMA1P23946 247 aa2.25□□□□□ -2.05
LSM6-205ENST00000507449 RPS10P46783 165 aaKnown RBP2.25□□□□□ -2.05
LSM6-205ENST00000507449 TDGF1P3P51864 188 aa2.25□□□□□ -2.05
LSM6-205ENST00000507449 ZNF133P52736 654 aaPredicted RBP2.25□□□□□ -2.05
LSM6-205ENST00000507449 CRISP3P54108 245 aa2.25□□□□□ -2.05
LSM6-205ENST00000507449 PLP1P60201 277 aa2.25□□□□□ -2.05
LSM6-205ENST00000507449 BST2Q10589 180 aaKnown RBP2.25□□□□□ -2.05
LSM6-205ENST00000507449 KRTAP13-3Q3SY46 172 aa2.25□□□□□ -2.05
LSM6-205ENST00000507449 KCTD21Q4G0X4 260 aa2.25□□□□□ -2.05
LSM6-205ENST00000507449 PRAMEF5Q5TYX0 476 aa2.25□□□□□ -2.05
LSM6-205ENST00000507449 PRAMEF6Q5VXH4 476 aa2.25□□□□□ -2.05
LSM6-205ENST00000507449 TRIM40Q6P9F5 258 aa2.25□□□□□ -2.05
LSM6-205ENST00000507449 C6orf89Q6UWU4 347 aa2.25□□□□□ -2.05
LSM6-205ENST00000507449 RUFY3Q7L099 469 aa2.25□□□□□ -2.05
LSM6-205ENST00000507449 ASCL5Q7RTU5 278 aa2.25□□□□□ -2.05
LSM6-205ENST00000507449 THOC6Q86W42 341 aaKnown RBP2.25□□□□□ -2.05
LSM6-205ENST00000507449 TGIF2LXQ8IUE1 241 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms