RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 VLDLRP98155 873 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 FCHO2Q0JRZ9 810 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 SRSF6Q13247 344 aaKnown RBP3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 SF3B4Q15427 424 aaKnown RBP eCLIP3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 TNXAQ16473 311 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 CTF1Q16619 201 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 HAGHQ16775 308 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 KCTD19Q17RG1 926 aaPredicted RBP3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 TRIM16LQ309B1 348 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 TMEM176BQ3YBM2 270 aaPredicted RBP3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 ACTBL2Q562R1 376 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 UTF1Q5T230 341 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 SLC22A10Q63ZE4 541 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 TCEAL6Q6IPX3 200 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 LCN10Q6JVE6 187 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 ENPP6Q6UWR7 440 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 UNQ6126/PRO20091Q6UXV3 157 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 ZNF836Q6ZNA1 936 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 RBM44Q6ZP01 1051 aaKnown RBP3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 ASB18Q6ZVZ8 466 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 CTU1Q7Z7A3 348 aaKnown RBP3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 CMC1Q7Z7K0 106 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 MRPL52Q86TS9 123 aaKnown RBP3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 MYPOPQ86VE0 399 aaPredicted RBP3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 PLA2G4DQ86XP0 818 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 RNF130Q86XS8 419 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 HS3ST5Q8IZT8 346 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 LINC00518Q8N0U6 118 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 FBXL14Q8N1E6 418 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 SLC39A11Q8N1S5 342 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 STK40Q8N2I9 435 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 HORMAD2Q8N7B1 307 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 BMPERQ8N8U9 685 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 ZSCAN4Q8NAM6 433 aaPredicted RBP3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 OR4F6Q8NGB9 312 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 OR52I1Q8NGK6 324 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 OR51A7Q8NH64 312 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 TMEM163Q8TC26 289 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 RNF128Q8TEB7 428 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 AENQ8WTP8 325 aaKnown RBP3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 TFB1MQ8WVM0 346 aaKnown RBP3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 RASSF5Q8WWW0 418 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 MAFIPQ8WZ33 124 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 BORCS5Q969J3 196 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 UBE2E3Q969T4 207 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 BPIFA2Q96DR5 249 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 CENPNQ96H22 339 aaPredicted RBP3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 ZNF419Q96HQ0 510 aaPredicted RBP3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 IGSF21Q96ID5 467 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 CPB2Q96IY4 423 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 GFM1Q96RP9 751 aaKnown RBP3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 PHB2Q99623 299 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 IL12RB2Q99665 862 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 GFI1Q99684 422 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 MEIS3Q99687 375 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 ECSITQ9BQ95 431 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 DCTN5Q9BTE1 182 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 GPR174Q9BXC1 333 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 UCK2Q9BZX2 261 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 LHPPQ9H008 270 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 METTL9Q9H1A3 318 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 MFSD1Q9H3U5 465 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 DSN1Q9H410 356 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 NIPAL2Q9H841 368 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 Q9H8V8 135 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 GPN2Q9H9Y4 310 aaPredicted RBP3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 SEBOXQ9HB31 216 aaPredicted RBP3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 POPDC2Q9HBU9 364 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 MOV10Q9HCE1 1003 aaKnown RBP3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 Q9N2K0 584 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 XPNPEP1Q9NQW7 623 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 CUTCQ9NTM9 273 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 ARMC1Q9NVT9 282 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 PAK1IP1Q9NWT1 392 aaPredicted RBP3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 DUS2Q9NX74 493 aaKnown RBP3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 GPR83Q9NYM4 423 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 PTTG2Q9NZH5 202 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 TMEM9Q9P0T7 183 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 GALPQ9UBC7 116 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 C19orf25Q9UFG5 118 aaPredicted RBP3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 OPN4Q9UHM6 478 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 NXT1Q9UKK6 140 aaKnown RBP3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 RAB26Q9ULW5 256 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 UBQLN1Q9UMX0 589 aaKnown RBP3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 SCML1Q9UN30 329 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 ASF1AQ9Y294 204 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 MRPS28Q9Y2Q9 187 aaKnown RBP3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 DHRS7Q9Y394 339 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 OR1A2Q9Y585 309 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 STYXL1Q9Y6J8 313 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 USH1CQ9Y6N9 552 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 CTTNBP2Q8WZ74 1663 aa3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 MN1Q10571 1320 aaPredicted RBP3.17□□□□□ -1.9
HMGB3P15-201ENST00000507326 VIRMAQ69YN4 1812 aaKnown RBP3.16□□□□□ -1.9
HMGB3P15-201ENST00000507326 FGD5Q6ZNL6 1462 aa3.16□□□□□ -1.9
HMGB3P15-201ENST00000507326 EIF3AQ14152 1382 aaKnown RBP3.16□□□□□ -1.9
HMGB3P15-201ENST00000507326 HEG1Q9ULI3 1381 aa3.16□□□□□ -1.9
HMGB3P15-201ENST00000507326 OR2M5A3KFT3 312 aa3.16□□□□□ -1.9
HMGB3P15-201ENST00000507326 ZNF99A8MXY4 864 aaPredicted RBP3.16□□□□□ -1.9
HMGB3P15-201ENST00000507326 MIF4GDA9UHW6 222 aaKnown RBP3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms