RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 M0R082 166 aa12.58□□□□□ -0.4
HMGCS1-203ENST00000507004 ANGPT2O15123 496 aa12.58□□□□□ -0.4
HMGCS1-203ENST00000507004 UPK3AO75631 287 aa12.58□□□□□ -0.4
HMGCS1-203ENST00000507004 F12P00748 615 aaPredicted RBP12.58□□□□□ -0.4
HMGCS1-203ENST00000507004 MT-ATP6P00846 226 aa12.58□□□□□ -0.4
HMGCS1-203ENST00000507004 IGKV3-15P01624 115 aa12.58□□□□□ -0.4
HMGCS1-203ENST00000507004 IGLV1-44P01699 117 aa12.58□□□□□ -0.4
HMGCS1-203ENST00000507004 ERCC1P07992 297 aaPredicted RBP12.58□□□□□ -0.4
HMGCS1-203ENST00000507004 NQO1P15559 274 aaKnown RBP12.58□□□□□ -0.4
HMGCS1-203ENST00000507004 CBR1P16152 277 aa12.58□□□□□ -0.4
HMGCS1-203ENST00000507004 GRPRP30550 384 aa12.58□□□□□ -0.4
HMGCS1-203ENST00000507004 SERPINF1P36955 418 aa12.58□□□□□ -0.4
HMGCS1-203ENST00000507004 CHD3Q12873 2000 aaKnown RBP12.58□□□□□ -0.4
HMGCS1-203ENST00000507004 EFNB3Q15768 340 aa12.58□□□□□ -0.4
HMGCS1-203ENST00000507004 PAGE3Q5JUK9 113 aa12.58□□□□□ -0.4
HMGCS1-203ENST00000507004 INTS11Q5TA45 600 aaKnown RBP12.58□□□□□ -0.4
HMGCS1-203ENST00000507004 METTL21CQ5VZV1 264 aa12.58□□□□□ -0.4
HMGCS1-203ENST00000507004 PODNL1Q6PEZ8 512 aa12.58□□□□□ -0.4
HMGCS1-203ENST00000507004 ZNF613Q6PF04 617 aa12.58□□□□□ -0.4
HMGCS1-203ENST00000507004 HDXQ7Z353 690 aa12.58□□□□□ -0.4
HMGCS1-203ENST00000507004 HIPK1Q86Z02 1210 aa12.58□□□□□ -0.4
HMGCS1-203ENST00000507004 UEVLDQ8IX04 471 aa12.58□□□□□ -0.4
HMGCS1-203ENST00000507004 DPP10Q8N608 796 aa12.58□□□□□ -0.4
HMGCS1-203ENST00000507004 ZNF540Q8NDQ6 660 aa12.58□□□□□ -0.4
HMGCS1-203ENST00000507004 NUP37Q8NFH4 326 aa12.58□□□□□ -0.4
HMGCS1-203ENST00000507004 ZNF417Q8TAU3 575 aa12.58□□□□□ -0.4
HMGCS1-203ENST00000507004 RASSF5Q8WWW0 418 aa12.58□□□□□ -0.4
HMGCS1-203ENST00000507004 SLC41A3Q96GZ6 507 aa12.58□□□□□ -0.4
HMGCS1-203ENST00000507004 MAGEB18Q96M61 343 aa12.58□□□□□ -0.4
HMGCS1-203ENST00000507004 ZNF587Q96SQ5 575 aaPredicted RBP12.58□□□□□ -0.4
HMGCS1-203ENST00000507004 DENND2DQ9H6A0 471 aaPredicted RBP12.58□□□□□ -0.4
HMGCS1-203ENST00000507004 ZNF442Q9H7R0 627 aa12.58□□□□□ -0.4
HMGCS1-203ENST00000507004 YAE1D1Q9NRH1 226 aa12.58□□□□□ -0.4
HMGCS1-203ENST00000507004 CA10Q9NS85 328 aa12.58□□□□□ -0.4
HMGCS1-203ENST00000507004 TMEM160Q9NX00 188 aa12.58□□□□□ -0.4
HMGCS1-203ENST00000507004 KLHL14Q9P2G3 628 aa12.58□□□□□ -0.4
HMGCS1-203ENST00000507004 USP22Q9UPT9 525 aa12.58□□□□□ -0.4
HMGCS1-203ENST00000507004 NOX1Q9Y5S8 564 aa12.58□□□□□ -0.4
HMGCS1-203ENST00000507004 IGHV4-30-2A0A087WSY4 118 aa12.57□□□□□ -0.4
HMGCS1-203ENST00000507004 A0A0B4J2E0 115 aa12.57□□□□□ -0.4
HMGCS1-203ENST00000507004 IGHV1-18A0A0C4DH31 117 aa12.57□□□□□ -0.4
HMGCS1-203ENST00000507004 A0A1B0GX12 115 aa12.57□□□□□ -0.4
HMGCS1-203ENST00000507004 HTR2AP28223 471 aa12.57□□□□□ -0.4
HMGCS1-203ENST00000507004 PDLIM4P50479 330 aa12.57□□□□□ -0.4
HMGCS1-203ENST00000507004 VLDLRP98155 873 aa12.57□□□□□ -0.4
HMGCS1-203ENST00000507004 HOXC5Q00444 222 aa12.57□□□□□ -0.4
HMGCS1-203ENST00000507004 IL1RL1Q01638 556 aa12.57□□□□□ -0.4
HMGCS1-203ENST00000507004 NAAAQ02083 359 aa12.57□□□□□ -0.4
HMGCS1-203ENST00000507004 OR1Q1Q15612 314 aa12.57□□□□□ -0.4
HMGCS1-203ENST00000507004 SWI5Q1ZZU3 235 aa12.57□□□□□ -0.4
HMGCS1-203ENST00000507004 RUNDC3AQ59EK9 446 aa12.57□□□□□ -0.4
HMGCS1-203ENST00000507004 DHDDSQ86SQ9 333 aa12.57□□□□□ -0.4
HMGCS1-203ENST00000507004 PATL1Q86TB9 770 aaKnown RBP12.57□□□□□ -0.4
HMGCS1-203ENST00000507004 PRIMA1Q86XR5 153 aa12.57□□□□□ -0.4
HMGCS1-203ENST00000507004 NANOS1Q8WY41 292 aaKnown RBP12.57□□□□□ -0.4
HMGCS1-203ENST00000507004 TAAR8Q969N4 342 aa12.57□□□□□ -0.4
HMGCS1-203ENST00000507004 ANKRD27Q96NW4 1050 aa12.57□□□□□ -0.4
HMGCS1-203ENST00000507004 MRPL39Q9NYK5 338 aaKnown RBP12.57□□□□□ -0.4
HMGCS1-203ENST00000507004 SLAMF8Q9P0V8 285 aa12.57□□□□□ -0.4
HMGCS1-203ENST00000507004 B3GAT1Q9P2W7 334 aa12.57□□□□□ -0.4
HMGCS1-203ENST00000507004 LPAR3Q9UBY5 353 aa12.57□□□□□ -0.4
HMGCS1-203ENST00000507004 FBXL3Q9UKT7 428 aa12.57□□□□□ -0.4
HMGCS1-203ENST00000507004 ZNF726A6NNF4 738 aa12.56□□□□□ -0.4
HMGCS1-203ENST00000507004 ZNF99A8MXY4 864 aaPredicted RBP12.56□□□□□ -0.4
HMGCS1-203ENST00000507004 MFN2O95140 757 aa12.56□□□□□ -0.4
HMGCS1-203ENST00000507004 PTNP21246 168 aa12.56□□□□□ -0.4
HMGCS1-203ENST00000507004 PCBP3P57721 371 aaKnown RBP12.56□□□□□ -0.4
HMGCS1-203ENST00000507004 ARF1P84077 181 aaKnown RBP12.56□□□□□ -0.4
HMGCS1-203ENST00000507004 CYP51A1Q16850 503 aa12.56□□□□□ -0.4
HMGCS1-203ENST00000507004 TMEM249Q2WGJ8 235 aa12.56□□□□□ -0.4
HMGCS1-203ENST00000507004 CHRFAM7AQ494W8 412 aa12.56□□□□□ -0.4
HMGCS1-203ENST00000507004 DLEU7Q6UYE1 221 aa12.56□□□□□ -0.4
HMGCS1-203ENST00000507004 PXKQ7Z7A4 578 aa12.56□□□□□ -0.4
HMGCS1-203ENST00000507004 KDM8Q8N371 416 aa12.56□□□□□ -0.4
HMGCS1-203ENST00000507004 MAPK1IP1LQ8NDC0 245 aa12.56□□□□□ -0.4
HMGCS1-203ENST00000507004 RNF217Q8TC41 542 aa12.56□□□□□ -0.4
HMGCS1-203ENST00000507004 C10orf105Q8TEF2 133 aa12.56□□□□□ -0.4
HMGCS1-203ENST00000507004 CKAP2Q8WWK9 683 aa12.56□□□□□ -0.4
HMGCS1-203ENST00000507004 FBXO17Q96EF6 278 aa12.56□□□□□ -0.4
HMGCS1-203ENST00000507004 SH3GL1Q99961 368 aa12.56□□□□□ -0.4
HMGCS1-203ENST00000507004 CPPED1Q9BRF8 314 aaPredicted RBP12.56□□□□□ -0.4
HMGCS1-203ENST00000507004 RAB1BQ9H0U4 201 aa12.56□□□□□ -0.4
HMGCS1-203ENST00000507004 CRLF2Q9HC73 371 aa12.56□□□□□ -0.4
HMGCS1-203ENST00000507004 GPR35Q9HC97 309 aa12.56□□□□□ -0.4
HMGCS1-203ENST00000507004 CDC42EP3Q9UKI2 254 aa12.56□□□□□ -0.4
HMGCS1-203ENST00000507004 CR1P17927 2039 aa12.55□□□□□ -0.4
HMGCS1-203ENST00000507004 SONP18583 2426 aaKnown RBP12.55□□□□□ -0.4
HMGCS1-203ENST00000507004 IGKV1D-42A0A075B6H8 117 aa12.55□□□□□ -0.4
HMGCS1-203ENST00000507004 LOC390937A0A1W2PQ73 354 aa12.55□□□□□ -0.4
HMGCS1-203ENST00000507004 TRAF3IP2O43734 574 aaPredicted RBP12.55□□□□□ -0.4
HMGCS1-203ENST00000507004 CHP2O43745 196 aa12.55□□□□□ -0.4
HMGCS1-203ENST00000507004 TPST1O60507 370 aa12.55□□□□□ -0.4
HMGCS1-203ENST00000507004 CECR9P0C854 216 aa12.55□□□□□ -0.4
HMGCS1-203ENST00000507004 USF1P22415 310 aaPredicted RBP12.55□□□□□ -0.4
HMGCS1-203ENST00000507004 GZMKP49863 264 aa12.55□□□□□ -0.4
HMGCS1-203ENST00000507004 PPOXP50336 477 aa12.55□□□□□ -0.4
HMGCS1-203ENST00000507004 PUDPQ08623 228 aa12.55□□□□□ -0.4
HMGCS1-203ENST00000507004 PMS2P3Q13401 168 aa12.55□□□□□ -0.4
HMGCS1-203ENST00000507004 ADRM1Q16186 407 aa12.55□□□□□ -0.4
HMGCS1-203ENST00000507004 CEACAM16Q2WEN9 425 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms