RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 C10orf91Q5T1B1 145 aa15.65■□□□□ 0.1
SQSTM1-211ENST00000506690 SLC43A2Q8N370 569 aa15.65■□□□□ 0.1
SQSTM1-211ENST00000506690 GLYATL2Q8WU03 294 aa15.65■□□□□ 0.1
SQSTM1-211ENST00000506690 ZNRF4Q8WWF5 429 aa15.65■□□□□ 0.1
SQSTM1-211ENST00000506690 IRF7Q92985 503 aa15.65■□□□□ 0.1
SQSTM1-211ENST00000506690 ZNF350Q9GZX5 532 aa15.65■□□□□ 0.1
SQSTM1-211ENST00000506690 TSPAN10Q9H1Z9 355 aaPredicted RBP15.65■□□□□ 0.1
SQSTM1-211ENST00000506690 IL21RQ9HBE5 538 aa15.65■□□□□ 0.1
SQSTM1-211ENST00000506690 C14orf105Q9NVL8 296 aa15.65■□□□□ 0.1
SQSTM1-211ENST00000506690 KCNE5Q9UJ90 142 aa15.65■□□□□ 0.1
SQSTM1-211ENST00000506690 RNGTTO60942 597 aaKnown RBP15.64■□□□□ 0.09
SQSTM1-211ENST00000506690 IFNA4P05014 189 aa15.64■□□□□ 0.09
SQSTM1-211ENST00000506690 DBIP07108 87 aaKnown RBP15.64■□□□□ 0.09
SQSTM1-211ENST00000506690 MELTFP08582 738 aa15.64■□□□□ 0.09
SQSTM1-211ENST00000506690 CSRP1P21291 193 aaKnown RBP15.64■□□□□ 0.09
SQSTM1-211ENST00000506690 CSF2RBP32927 897 aa15.64■□□□□ 0.09
SQSTM1-211ENST00000506690 DIO1P49895 249 aa15.64■□□□□ 0.09
SQSTM1-211ENST00000506690 METRNLQ641Q3 311 aa15.64■□□□□ 0.09
SQSTM1-211ENST00000506690 SLC35F3Q8IY50 421 aa15.64■□□□□ 0.09
SQSTM1-211ENST00000506690 BEST3Q8N1M1 668 aa15.64■□□□□ 0.09
SQSTM1-211ENST00000506690 ZNF619Q8N2I2 560 aa15.64■□□□□ 0.09
SQSTM1-211ENST00000506690 OR1S2Q8NGQ3 325 aa15.64■□□□□ 0.09
SQSTM1-211ENST00000506690 OTUB2Q96DC9 234 aa15.64■□□□□ 0.09
SQSTM1-211ENST00000506690 MRPL48Q96GC5 212 aaKnown RBP15.64■□□□□ 0.09
SQSTM1-211ENST00000506690 EXO5Q9H790 373 aa15.64■□□□□ 0.09
SQSTM1-211ENST00000506690 TCF7L1Q9HCS4 588 aa15.64■□□□□ 0.09
SQSTM1-211ENST00000506690 GPN3Q9UHW5 284 aaPredicted RBP15.64■□□□□ 0.09
SQSTM1-211ENST00000506690 ZNF337Q9Y3M9 751 aa15.64■□□□□ 0.09
SQSTM1-211ENST00000506690 SYNDIG1LA6NDD5 238 aa15.64■□□□□ 0.09
SQSTM1-211ENST00000506690 OR5H14A6NHG9 310 aa15.64■□□□□ 0.09
SQSTM1-211ENST00000506690 SLC25A12O75746 678 aa15.64■□□□□ 0.09
SQSTM1-211ENST00000506690 PMS2P2O95744 297 aa15.64■□□□□ 0.09
SQSTM1-211ENST00000506690 ITGB2P05107 769 aa15.64■□□□□ 0.09
SQSTM1-211ENST00000506690 SRSF4Q08170 494 aaKnown RBP15.64■□□□□ 0.09
SQSTM1-211ENST00000506690 SNTB1Q13884 538 aaKnown RBP15.64■□□□□ 0.09
SQSTM1-211ENST00000506690 GLT8D1Q68CQ7 371 aa15.64■□□□□ 0.09
SQSTM1-211ENST00000506690 LRRTM1Q86UE6 522 aa15.64■□□□□ 0.09
SQSTM1-211ENST00000506690 ADAT1Q9BUB4 502 aaKnown RBP15.64■□□□□ 0.09
SQSTM1-211ENST00000506690 SLITRK2Q9H156 845 aa15.64■□□□□ 0.09
SQSTM1-211ENST00000506690 TM7SF3Q9NS93 570 aa15.64■□□□□ 0.09
SQSTM1-211ENST00000506690 WSB2Q9NYS7 404 aaPredicted RBP15.64■□□□□ 0.09
SQSTM1-211ENST00000506690 A0A087WV48 116 aa15.63■□□□□ 0.09
SQSTM1-211ENST00000506690 GTF2F2P13984 249 aa15.63■□□□□ 0.09
SQSTM1-211ENST00000506690 EPCAMP16422 314 aa15.63■□□□□ 0.09
SQSTM1-211ENST00000506690 BDKRB2P30411 391 aa15.63■□□□□ 0.09
SQSTM1-211ENST00000506690 SCAND1P57086 179 aa15.63■□□□□ 0.09
SQSTM1-211ENST00000506690 PON3Q15166 354 aa15.63■□□□□ 0.09
SQSTM1-211ENST00000506690 IGSF11Q5DX21 431 aa15.63■□□□□ 0.09
SQSTM1-211ENST00000506690 PGAP1Q75T13 922 aa15.63■□□□□ 0.09
SQSTM1-211ENST00000506690 DEFB128Q7Z7B8 93 aa15.63■□□□□ 0.09
SQSTM1-211ENST00000506690 C12orf45Q8N5I9 185 aaPredicted RBP15.63■□□□□ 0.09
SQSTM1-211ENST00000506690 BOLLQ8N9W6 283 aaKnown RBP15.63■□□□□ 0.09
SQSTM1-211ENST00000506690 SFT2D1Q8WV19 159 aa15.63■□□□□ 0.09
SQSTM1-211ENST00000506690 EDAQ92838 391 aa15.63■□□□□ 0.09
SQSTM1-211ENST00000506690 POFUT1Q9H488 388 aa15.63■□□□□ 0.09
SQSTM1-211ENST00000506690 SYNPO2LQ9H987 977 aa15.63■□□□□ 0.09
SQSTM1-211ENST00000506690 PRDM9Q9NQV7 894 aa15.63■□□□□ 0.09
SQSTM1-211ENST00000506690 A0A1B0GTI1 187 aa15.63■□□□□ 0.09
SQSTM1-211ENST00000506690 OR6C68A6NDL8 312 aa15.63■□□□□ 0.09
SQSTM1-211ENST00000506690 GGT3PA6NGU5 568 aa15.63■□□□□ 0.09
SQSTM1-211ENST00000506690 SPP1P10451 314 aa15.63■□□□□ 0.09
SQSTM1-211ENST00000506690 SLC25A4P12235 298 aa15.63■□□□□ 0.09
SQSTM1-211ENST00000506690 ST8SIA6P61647 398 aa15.63■□□□□ 0.09
SQSTM1-211ENST00000506690 IRF4Q15306 451 aa15.63■□□□□ 0.09
SQSTM1-211ENST00000506690 Q499Y3 187 aa15.63■□□□□ 0.09
SQSTM1-211ENST00000506690 ZNF684Q5T5D7 378 aa15.63■□□□□ 0.09
SQSTM1-211ENST00000506690 NRROSQ86YC3 692 aa15.63■□□□□ 0.09
SQSTM1-211ENST00000506690 VRK1Q99986 396 aaPredicted RBP15.63■□□□□ 0.09
SQSTM1-211ENST00000506690 CARHSP1Q9Y2V2 147 aaKnown RBP15.63■□□□□ 0.09
SQSTM1-211ENST00000506690 RNF222A6NCQ9 220 aa15.62■□□□□ 0.09
SQSTM1-211ENST00000506690 PRR32B1ATL7 298 aa15.62■□□□□ 0.09
SQSTM1-211ENST00000506690 PEX12O00623 359 aa15.62■□□□□ 0.09
SQSTM1-211ENST00000506690 OR4E1P0C645 316 aa15.62■□□□□ 0.09
SQSTM1-211ENST00000506690 TSFMP43897 325 aaKnown RBP15.62■□□□□ 0.09
SQSTM1-211ENST00000506690 GUCA2AQ02747 115 aa15.62■□□□□ 0.09
SQSTM1-211ENST00000506690 PLAURQ03405 335 aa15.62■□□□□ 0.09
SQSTM1-211ENST00000506690 ANKRD16Q6P6B7 361 aa15.62■□□□□ 0.09
SQSTM1-211ENST00000506690 TMPRSS12Q86WS5 348 aa15.62■□□□□ 0.09
SQSTM1-211ENST00000506690 SPAG16Q8N0X2 631 aa15.62■□□□□ 0.09
SQSTM1-211ENST00000506690 CCDC107Q8WV48 283 aa15.62■□□□□ 0.09
SQSTM1-211ENST00000506690 CMSS1Q9BQ75 279 aaKnown RBP15.62■□□□□ 0.09
SQSTM1-211ENST00000506690 ZNF426Q9BUY5 554 aa15.62■□□□□ 0.09
SQSTM1-211ENST00000506690 ZNF471Q9BX82 626 aaPredicted RBP15.62■□□□□ 0.09
SQSTM1-211ENST00000506690 SPHK2Q9NRA0 654 aa15.62■□□□□ 0.09
SQSTM1-211ENST00000506690 GXYLT2A0PJZ3 443 aa15.62■□□□□ 0.09
SQSTM1-211ENST00000506690 LINC00587B1AMM8 73 aa15.62■□□□□ 0.09
SQSTM1-211ENST00000506690 CD3DP04234 171 aa15.62■□□□□ 0.09
SQSTM1-211ENST00000506690 NTHL1P78549 312 aa15.62■□□□□ 0.09
SQSTM1-211ENST00000506690 C11orf87Q6NUJ2 197 aa15.62■□□□□ 0.09
SQSTM1-211ENST00000506690 LRRC25Q8N386 305 aaPredicted RBP15.62■□□□□ 0.09
SQSTM1-211ENST00000506690 CLEC1AQ8NC01 280 aa15.62■□□□□ 0.09
SQSTM1-211ENST00000506690 OR5M8Q8NGP6 311 aa15.62■□□□□ 0.09
SQSTM1-211ENST00000506690 ARSGQ96EG1 525 aa15.62■□□□□ 0.09
SQSTM1-211ENST00000506690 COX14Q96I36 57 aa15.62■□□□□ 0.09
SQSTM1-211ENST00000506690 HSPA12BQ96MM6 686 aa15.62■□□□□ 0.09
SQSTM1-211ENST00000506690 RNF208Q9H0X6 261 aa15.62■□□□□ 0.09
SQSTM1-211ENST00000506690 OR10H1Q9Y4A9 318 aa15.62■□□□□ 0.09
SQSTM1-211ENST00000506690 TICRRQ7Z2Z1 1910 aa15.61■□□□□ 0.09
SQSTM1-211ENST00000506690 A0A0B4J2E0 115 aa15.61■□□□□ 0.09
SQSTM1-211ENST00000506690 A0A1B0GX12 115 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms