RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 RANBP3LQ86VV4 465 aaPredicted RBP7.93□□□□□ -1.14
PDLIM5-209ENST00000506632 SLC30A8Q8IWU4 369 aa7.93□□□□□ -1.14
PDLIM5-209ENST00000506632 TMEM123Q8N131 208 aa7.93□□□□□ -1.14
PDLIM5-209ENST00000506632 SMYD1Q8NB12 490 aa7.93□□□□□ -1.14
PDLIM5-209ENST00000506632 MAGEE2Q8TD90 523 aaPredicted RBP7.93□□□□□ -1.14
PDLIM5-209ENST00000506632 BCL2L2Q92843 193 aaPredicted RBP7.93□□□□□ -1.14
PDLIM5-209ENST00000506632 ZNF317Q96PQ6 595 aaPredicted RBP7.93□□□□□ -1.14
PDLIM5-209ENST00000506632 ALKBH3Q96Q83 286 aaPredicted RBP7.93□□□□□ -1.14
PDLIM5-209ENST00000506632 DHRS9Q9BPW9 319 aa7.93□□□□□ -1.14
PDLIM5-209ENST00000506632 TMEM43Q9BTV4 400 aa7.93□□□□□ -1.14
PDLIM5-209ENST00000506632 C1QTNF6Q9BXI9 259 aa7.93□□□□□ -1.14
PDLIM5-209ENST00000506632 TMEM27Q9HBJ8 222 aa7.93□□□□□ -1.14
PDLIM5-209ENST00000506632 FGFR1OP2Q9NVK5 253 aa7.93□□□□□ -1.14
PDLIM5-209ENST00000506632 FAIMQ9NVQ4 179 aa7.93□□□□□ -1.14
PDLIM5-209ENST00000506632 CORINQ9Y5Q5 1042 aa7.93□□□□□ -1.14
PDLIM5-209ENST00000506632 ABCA2Q9BZC7 2435 aa7.93□□□□□ -1.14
PDLIM5-209ENST00000506632 ZNF587BE7ETH6 402 aa7.92□□□□□ -1.14
PDLIM5-209ENST00000506632 MS4A18H0YCH9 400 aa7.92□□□□□ -1.14
PDLIM5-209ENST00000506632 M0R3H8 397 aa7.92□□□□□ -1.14
PDLIM5-209ENST00000506632 CHP2O43745 196 aa7.92□□□□□ -1.14
PDLIM5-209ENST00000506632 NDUFS7O75251 213 aa7.92□□□□□ -1.14
PDLIM5-209ENST00000506632 SLC43A1O75387 559 aa7.92□□□□□ -1.14
PDLIM5-209ENST00000506632 WNT11O96014 354 aa7.92□□□□□ -1.14
PDLIM5-209ENST00000506632 HPRP00739 348 aa7.92□□□□□ -1.14
PDLIM5-209ENST00000506632 THY1P04216 161 aa7.92□□□□□ -1.14
PDLIM5-209ENST00000506632 TROVE2P10155 538 aaKnown RBP eCLIP7.92□□□□□ -1.14
PDLIM5-209ENST00000506632 PAX7P23759 505 aa7.92□□□□□ -1.14
PDLIM5-209ENST00000506632 GTF2E2P29084 291 aaKnown RBP7.92□□□□□ -1.14
PDLIM5-209ENST00000506632 SH3BGRP55822 239 aaPredicted RBP7.92□□□□□ -1.14
PDLIM5-209ENST00000506632 CLDN17P56750 224 aa7.92□□□□□ -1.14
PDLIM5-209ENST00000506632 KRTAP1-1Q07627 177 aa7.92□□□□□ -1.14
PDLIM5-209ENST00000506632 KLF10Q13118 480 aa7.92□□□□□ -1.14
PDLIM5-209ENST00000506632 CLEC12BQ2HXU8 276 aa7.92□□□□□ -1.14
PDLIM5-209ENST00000506632 VMACQ2NL98 169 aa7.92□□□□□ -1.14
PDLIM5-209ENST00000506632 MS4A18Q3C1V0 323 aa7.92□□□□□ -1.14
PDLIM5-209ENST00000506632 C4orf48Q5BLP8 95 aa7.92□□□□□ -1.14
PDLIM5-209ENST00000506632 AGAP6Q5VW22 663 aa7.92□□□□□ -1.14
PDLIM5-209ENST00000506632 NANOGP8Q6NSW7 305 aa7.92□□□□□ -1.14
PDLIM5-209ENST00000506632 ZNF544Q6NX49 715 aa7.92□□□□□ -1.14
PDLIM5-209ENST00000506632 ZNF613Q6PF04 617 aa7.92□□□□□ -1.14
PDLIM5-209ENST00000506632 SLC22A25Q6T423 547 aa7.92□□□□□ -1.14
PDLIM5-209ENST00000506632 WDR88Q6ZMY6 472 aa7.92□□□□□ -1.14
PDLIM5-209ENST00000506632 CCDC80Q76M96 950 aa7.92□□□□□ -1.14
PDLIM5-209ENST00000506632 PATL1Q86TB9 770 aaKnown RBP7.92□□□□□ -1.14
PDLIM5-209ENST00000506632 TSPYL5Q86VY4 417 aaPredicted RBP7.92□□□□□ -1.14
PDLIM5-209ENST00000506632 CALHM3Q86XJ0 350 aa7.92□□□□□ -1.14
PDLIM5-209ENST00000506632 SCAIQ8N9R8 606 aa7.92□□□□□ -1.14
PDLIM5-209ENST00000506632 OR4D11Q8NGI4 311 aa7.92□□□□□ -1.14
PDLIM5-209ENST00000506632 OR6T1Q8NGN1 323 aa7.92□□□□□ -1.14
PDLIM5-209ENST00000506632 OR10A6Q8NH74 314 aa7.92□□□□□ -1.14
PDLIM5-209ENST00000506632 GTPBP3Q969Y2 492 aaKnown RBP7.92□□□□□ -1.14
PDLIM5-209ENST00000506632 TAMM41Q96BW9 452 aa7.92□□□□□ -1.14
PDLIM5-209ENST00000506632 MOGAT1Q96PD6 335 aa7.92□□□□□ -1.14
PDLIM5-209ENST00000506632 OR2M2Q96R28 347 aa7.92□□□□□ -1.14
PDLIM5-209ENST00000506632 EPYCQ99645 322 aa7.92□□□□□ -1.14
PDLIM5-209ENST00000506632 MCHR1Q99705 422 aa7.92□□□□□ -1.14
PDLIM5-209ENST00000506632 ZNF426Q9BUY5 554 aa7.92□□□□□ -1.14
PDLIM5-209ENST00000506632 PCDHAC1Q9H158 963 aa7.92□□□□□ -1.14
PDLIM5-209ENST00000506632 CCDC134Q9H6E4 229 aa7.92□□□□□ -1.14
PDLIM5-209ENST00000506632 NANOGQ9H9S0 305 aa7.92□□□□□ -1.14
PDLIM5-209ENST00000506632 SAR1AQ9NR31 198 aa7.92□□□□□ -1.14
PDLIM5-209ENST00000506632 CBLN4Q9NTU7 201 aa7.92□□□□□ -1.14
PDLIM5-209ENST00000506632 MRGBPQ9NV56 204 aa7.92□□□□□ -1.14
PDLIM5-209ENST00000506632 MRPL39Q9NYK5 338 aaKnown RBP7.92□□□□□ -1.14
PDLIM5-209ENST00000506632 CRNNQ9UBG3 495 aaPredicted RBP7.92□□□□□ -1.14
PDLIM5-209ENST00000506632 GDF2Q9UK05 429 aaPredicted RBP7.92□□□□□ -1.14
PDLIM5-209ENST00000506632 SLC13A4Q9UKG4 626 aa7.92□□□□□ -1.14
PDLIM5-209ENST00000506632 JMJD1CQ15652 2540 aa7.92□□□□□ -1.14
PDLIM5-209ENST00000506632 ARFGEF3Q5TH69 2177 aa7.91□□□□□ -1.14
PDLIM5-209ENST00000506632 SONP18583 2426 aaKnown RBP7.91□□□□□ -1.14
PDLIM5-209ENST00000506632 IGHV1-18A0A0C4DH31 117 aa7.91□□□□□ -1.14
PDLIM5-209ENST00000506632 LRRN3E7EW58 273 aa7.91□□□□□ -1.14
PDLIM5-209ENST00000506632 ATP6V1G2-DDX39BF2Z307 99 aa7.91□□□□□ -1.14
PDLIM5-209ENST00000506632 SMAD7O15105 426 aaKnown RBP7.91□□□□□ -1.14
PDLIM5-209ENST00000506632 KRT33AO76009 404 aa7.91□□□□□ -1.14
PDLIM5-209ENST00000506632 NPPAP01160 153 aa7.91□□□□□ -1.14
PDLIM5-209ENST00000506632 IGLV1-44P01699 117 aa7.91□□□□□ -1.14
PDLIM5-209ENST00000506632 HLA-DOBP13765 273 aa7.91□□□□□ -1.14
PDLIM5-209ENST00000506632 CDH2P19022 906 aaPredicted RBP7.91□□□□□ -1.14
PDLIM5-209ENST00000506632 PTNP21246 168 aa7.91□□□□□ -1.14
PDLIM5-209ENST00000506632 ACVR1BP36896 505 aa7.91□□□□□ -1.14
PDLIM5-209ENST00000506632 ARFIP2P53365 341 aa7.91□□□□□ -1.14
PDLIM5-209ENST00000506632 ROR2Q01974 943 aaKnown RBP7.91□□□□□ -1.14
PDLIM5-209ENST00000506632 PUDPQ08623 228 aa7.91□□□□□ -1.14
PDLIM5-209ENST00000506632 CYLC2Q14093 348 aaPredicted RBP7.91□□□□□ -1.14
PDLIM5-209ENST00000506632 C3orf36Q3SXR2 165 aa7.91□□□□□ -1.14
PDLIM5-209ENST00000506632 LINC01559Q495D7 138 aa7.91□□□□□ -1.14
PDLIM5-209ENST00000506632 RABL3Q5HYI8 236 aa7.91□□□□□ -1.14
PDLIM5-209ENST00000506632 ENTPD8Q5MY95 495 aa7.91□□□□□ -1.14
PDLIM5-209ENST00000506632 INTS11Q5TA45 600 aaKnown RBP7.91□□□□□ -1.14
PDLIM5-209ENST00000506632 REP15Q6BDI9 236 aa7.91□□□□□ -1.14
PDLIM5-209ENST00000506632 ANKRD16Q6P6B7 361 aa7.91□□□□□ -1.14
PDLIM5-209ENST00000506632 KLHL24Q6TFL4 600 aa7.91□□□□□ -1.14
PDLIM5-209ENST00000506632 RBM45Q8IUH3 476 aaKnown RBP7.91□□□□□ -1.14
PDLIM5-209ENST00000506632 WDFY1Q8IWB7 410 aa7.91□□□□□ -1.14
PDLIM5-209ENST00000506632 MUC15Q8N387 334 aa7.91□□□□□ -1.14
PDLIM5-209ENST00000506632 FAM169BQ8N8A8 192 aa7.91□□□□□ -1.14
PDLIM5-209ENST00000506632 OR8J3Q8NGG0 315 aa7.91□□□□□ -1.14
PDLIM5-209ENST00000506632 ADAMTS16Q8TE57 1224 aa7.91□□□□□ -1.14
PDLIM5-209ENST00000506632 LRRC58Q96CX6 371 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms