RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 SLC13A4Q9UKG4 626 aa18.24■□□□□ 0.51
SQSTM1-210ENST00000506042 ZNF99A8MXY4 864 aaPredicted RBP18.23■□□□□ 0.51
SQSTM1-210ENST00000506042 B4DSR2 109 aa18.23■□□□□ 0.51
SQSTM1-210ENST00000506042 NR5A2O00482 541 aa18.23■□□□□ 0.51
SQSTM1-210ENST00000506042 SYNGR3O43761 229 aa18.23■□□□□ 0.51
SQSTM1-210ENST00000506042 ETFAP13804 333 aa18.23■□□□□ 0.51
SQSTM1-210ENST00000506042 THBS4P35443 961 aa18.23■□□□□ 0.51
SQSTM1-210ENST00000506042 CDKN2CP42773 168 aa18.23■□□□□ 0.51
SQSTM1-210ENST00000506042 DVL1P1P54792 670 aaPredicted RBP18.23■□□□□ 0.51
SQSTM1-210ENST00000506042 SELENOVP59797 346 aa18.23■□□□□ 0.51
SQSTM1-210ENST00000506042 FADDQ13158 208 aa18.23■□□□□ 0.51
SQSTM1-210ENST00000506042 GKAP1Q5VSY0 366 aaPredicted RBP18.23■□□□□ 0.51
SQSTM1-210ENST00000506042 C12orf54Q6X4T0 127 aa18.23■□□□□ 0.51
SQSTM1-210ENST00000506042 UEVLDQ8IX04 471 aa18.23■□□□□ 0.51
SQSTM1-210ENST00000506042 AENQ8WTP8 325 aaKnown RBP18.23■□□□□ 0.51
SQSTM1-210ENST00000506042 TMEM19Q96HH6 336 aa18.23■□□□□ 0.51
SQSTM1-210ENST00000506042 SNX18Q96RF0 628 aa18.23■□□□□ 0.51
SQSTM1-210ENST00000506042 ASPNQ9BXN1 380 aa18.23■□□□□ 0.51
SQSTM1-210ENST00000506042 THAP1Q9NVV9 213 aa18.23■□□□□ 0.51
SQSTM1-210ENST00000506042 GRIP1Q9Y3R0 1128 aa18.23■□□□□ 0.51
SQSTM1-210ENST00000506042 CORINQ9Y5Q5 1042 aa18.23■□□□□ 0.51
SQSTM1-210ENST00000506042 GPR45Q9Y5Y3 372 aa18.23■□□□□ 0.51
SQSTM1-210ENST00000506042 SH3PXD2BA1X283 911 aa18.22■□□□□ 0.51
SQSTM1-210ENST00000506042 TMEM229AB2RXF0 380 aa18.22■□□□□ 0.51
SQSTM1-210ENST00000506042 NPIPB7O75200 414 aa18.22■□□□□ 0.51
SQSTM1-210ENST00000506042 ZNF432O94892 652 aa18.22■□□□□ 0.51
SQSTM1-210ENST00000506042 ALDOCP09972 364 aaKnown RBP18.22■□□□□ 0.51
SQSTM1-210ENST00000506042 TUBA1BP68363 451 aa18.22■□□□□ 0.51
SQSTM1-210ENST00000506042 TUBA4AP68366 448 aa18.22■□□□□ 0.51
SQSTM1-210ENST00000506042 GSG1Q2KHT4 349 aa18.22■□□□□ 0.51
SQSTM1-210ENST00000506042 CEACAM16Q2WEN9 425 aa18.22■□□□□ 0.51
SQSTM1-210ENST00000506042 SLC9B1Q4ZJI4 515 aa18.22■□□□□ 0.51
SQSTM1-210ENST00000506042 WDR93Q6P2C0 686 aa18.22■□□□□ 0.51
SQSTM1-210ENST00000506042 TUBA1AQ71U36 451 aa18.22■□□□□ 0.51
SQSTM1-210ENST00000506042 H1FNTQ75WM6 255 aaPredicted RBP18.22■□□□□ 0.51
SQSTM1-210ENST00000506042 MREGQ8N565 214 aa18.22■□□□□ 0.51
SQSTM1-210ENST00000506042 BHLHE22Q8NFJ8 381 aaPredicted RBP18.22■□□□□ 0.51
SQSTM1-210ENST00000506042 ZFAND2BQ8WV99 257 aa18.22■□□□□ 0.51
SQSTM1-210ENST00000506042 DOK1Q99704 481 aa18.22■□□□□ 0.51
SQSTM1-210ENST00000506042 OCEL1Q9H607 264 aa18.22■□□□□ 0.51
SQSTM1-210ENST00000506042 EVA1AQ9H8M9 152 aa18.22■□□□□ 0.51
SQSTM1-210ENST00000506042 GPR35Q9HC97 309 aa18.22■□□□□ 0.51
SQSTM1-210ENST00000506042 ZIM2Q9NZV7 527 aa18.22■□□□□ 0.51
SQSTM1-210ENST00000506042 ZNF346Q9UL40 294 aaKnown RBP18.22■□□□□ 0.51
SQSTM1-210ENST00000506042 POFUT2Q9Y2G5 429 aa18.22■□□□□ 0.51
SQSTM1-210ENST00000506042 IGHV2OR16-5A0A0B4J2B6 119 aa18.21■□□□□ 0.51
SQSTM1-210ENST00000506042 LOC102725191A0A1B0GVB3 256 aa18.21■□□□□ 0.51
SQSTM1-210ENST00000506042 LRP5LA4QPB2 252 aa18.21■□□□□ 0.51
SQSTM1-210ENST00000506042 SDHDO14521 159 aa18.21■□□□□ 0.51
SQSTM1-210ENST00000506042 RAB36O95755 333 aa18.21■□□□□ 0.51
SQSTM1-210ENST00000506042 CALCRP30988 508 aa18.21■□□□□ 0.51
SQSTM1-210ENST00000506042 P2RY4P51582 365 aa18.21■□□□□ 0.51
SQSTM1-210ENST00000506042 CDH15P55291 814 aa18.21■□□□□ 0.51
SQSTM1-210ENST00000506042 BST1Q10588 318 aa18.21■□□□□ 0.51
SQSTM1-210ENST00000506042 SERPINA11Q86U17 422 aa18.21■□□□□ 0.51
SQSTM1-210ENST00000506042 ADPRHL1Q8NDY3 354 aa18.21■□□□□ 0.51
SQSTM1-210ENST00000506042 RNF217Q8TC41 542 aa18.21■□□□□ 0.51
SQSTM1-210ENST00000506042 TEX37Q96LM6 180 aa18.21■□□□□ 0.51
SQSTM1-210ENST00000506042 PNPOQ9NVS9 261 aa18.21■□□□□ 0.51
SQSTM1-210ENST00000506042 MALRD1Q5VYJ5 2156 aa18.21■□□□□ 0.51
SQSTM1-210ENST00000506042 TRAV36DV7A0A075B6V5 113 aa18.2■□□□□ 0.5
SQSTM1-210ENST00000506042 ZNF726A6NNF4 738 aa18.2■□□□□ 0.5
SQSTM1-210ENST00000506042 TFP02787 698 aa18.2■□□□□ 0.5
SQSTM1-210ENST00000506042 ADRA2AP08913 450 aa18.2■□□□□ 0.5
SQSTM1-210ENST00000506042 CD79AP11912 226 aa18.2■□□□□ 0.5
SQSTM1-210ENST00000506042 ETS2P15036 469 aa18.2■□□□□ 0.5
SQSTM1-210ENST00000506042 ANPEPP15144 967 aa18.2■□□□□ 0.5
SQSTM1-210ENST00000506042 PPIBP23284 216 aaKnown RBP18.2■□□□□ 0.5
SQSTM1-210ENST00000506042 EPHA3P29320 983 aa18.2■□□□□ 0.5
SQSTM1-210ENST00000506042 STX1BP61266 288 aa18.2■□□□□ 0.5
SQSTM1-210ENST00000506042 ALG10BQ5I7T1 473 aa18.2■□□□□ 0.5
SQSTM1-210ENST00000506042 C6orf89Q6UWU4 347 aa18.2■□□□□ 0.5
SQSTM1-210ENST00000506042 CLIP4Q8N3C7 705 aa18.2■□□□□ 0.5
SQSTM1-210ENST00000506042 ZNF418Q8TF45 676 aaPredicted RBP18.2■□□□□ 0.5
SQSTM1-210ENST00000506042 SLC47A1Q96FL8 570 aa18.2■□□□□ 0.5
SQSTM1-210ENST00000506042 LRR1Q96L50 414 aa18.2■□□□□ 0.5
SQSTM1-210ENST00000506042 C20orf27Q9GZN8 174 aa18.2■□□□□ 0.5
SQSTM1-210ENST00000506042 NOX3Q9HBY0 568 aa18.2■□□□□ 0.5
SQSTM1-210ENST00000506042 BCL2L10Q9HD36 194 aa18.2■□□□□ 0.5
SQSTM1-210ENST00000506042 PRORSD1PA6NEY8 169 aa18.19■□□□□ 0.5
SQSTM1-210ENST00000506042 FTCDNL1E5RQL4 147 aa18.19■□□□□ 0.5
SQSTM1-210ENST00000506042 PRKAR1BP31321 381 aa18.19■□□□□ 0.5
SQSTM1-210ENST00000506042 GPR6P46095 362 aaPredicted RBP18.19■□□□□ 0.5
SQSTM1-210ENST00000506042 HGFACQ04756 655 aa18.19■□□□□ 0.5
SQSTM1-210ENST00000506042 LGALS3BPQ08380 585 aa18.19■□□□□ 0.5
SQSTM1-210ENST00000506042 FAM91A1Q658Y4 838 aa18.19■□□□□ 0.5
SQSTM1-210ENST00000506042 KRT80Q6KB66 452 aa18.19■□□□□ 0.5
SQSTM1-210ENST00000506042 ULK3Q6PHR2 472 aa18.19■□□□□ 0.5
SQSTM1-210ENST00000506042 MDP1Q86V88 176 aa18.19■□□□□ 0.5
SQSTM1-210ENST00000506042 MEX3DQ86XN8 651 aaKnown RBP18.19■□□□□ 0.5
SQSTM1-210ENST00000506042 MIER2Q8N344 545 aa18.19■□□□□ 0.5
SQSTM1-210ENST00000506042 GOLGA6L1Q8N7Z2 621 aa18.19■□□□□ 0.5
SQSTM1-210ENST00000506042 SCAIQ8N9R8 606 aa18.19■□□□□ 0.5
SQSTM1-210ENST00000506042 OR6N1Q8NGY5 312 aa18.19■□□□□ 0.5
SQSTM1-210ENST00000506042 OR6S1Q8NH40 331 aa18.19■□□□□ 0.5
SQSTM1-210ENST00000506042 ZMYND19Q96E35 227 aaPredicted RBP18.19■□□□□ 0.5
SQSTM1-210ENST00000506042 ZNF416Q9BWM5 594 aa18.19■□□□□ 0.5
SQSTM1-210ENST00000506042 TMEM27Q9HBJ8 222 aa18.19■□□□□ 0.5
SQSTM1-210ENST00000506042 A4GALTQ9NPC4 353 aa18.19■□□□□ 0.5
SQSTM1-210ENST00000506042 REV1Q9UBZ9 1251 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms