RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 ZNF43P17038 809 aa9.15□□□□□ -0.94
NR1I3-222ENST00000506018 CDKN1AP38936 164 aa9.15□□□□□ -0.94
NR1I3-222ENST00000506018 UBE2NP61088 152 aaKnown RBP9.15□□□□□ -0.94
NR1I3-222ENST00000506018 CDK6Q00534 326 aa9.15□□□□□ -0.94
NR1I3-222ENST00000506018 SCARB2Q14108 478 aa9.15□□□□□ -0.94
NR1I3-222ENST00000506018 MFSD13AQ14CX5 517 aa9.15□□□□□ -0.94
NR1I3-222ENST00000506018 PGGHGQ32M88 737 aa9.15□□□□□ -0.94
NR1I3-222ENST00000506018 TSPO2Q5TGU0 170 aa9.15□□□□□ -0.94
NR1I3-222ENST00000506018 C9orf135Q5VTT2 229 aa9.15□□□□□ -0.94
NR1I3-222ENST00000506018 ZNF544Q6NX49 715 aa9.15□□□□□ -0.94
NR1I3-222ENST00000506018 SEZ6L2Q6UXD5 910 aa9.15□□□□□ -0.94
NR1I3-222ENST00000506018 NET1Q7Z628 596 aaPredicted RBP9.15□□□□□ -0.94
NR1I3-222ENST00000506018 ATG4DQ86TL0 474 aaPredicted RBP9.15□□□□□ -0.94
NR1I3-222ENST00000506018 DTX2Q86UW9 622 aa9.15□□□□□ -0.94
NR1I3-222ENST00000506018 C10orf67Q8IYJ2 551 aa9.15□□□□□ -0.94
NR1I3-222ENST00000506018 CIARTQ8N365 385 aaPredicted RBP9.15□□□□□ -0.94
NR1I3-222ENST00000506018 MUC15Q8N387 334 aa9.15□□□□□ -0.94
NR1I3-222ENST00000506018 NFKBIDQ8NI38 313 aa9.15□□□□□ -0.94
NR1I3-222ENST00000506018 RNF217Q8TC41 542 aa9.15□□□□□ -0.94
NR1I3-222ENST00000506018 SLC38A4Q969I6 547 aa9.15□□□□□ -0.94
NR1I3-222ENST00000506018 SLC25A36Q96CQ1 311 aa9.15□□□□□ -0.94
NR1I3-222ENST00000506018 CDRT15Q96T59 188 aa9.15□□□□□ -0.94
NR1I3-222ENST00000506018 EPYCQ99645 322 aa9.15□□□□□ -0.94
NR1I3-222ENST00000506018 TRAF4Q9BUZ4 470 aaPredicted RBP9.15□□□□□ -0.94
NR1I3-222ENST00000506018 AMBRA1Q9C0C7 1298 aa9.15□□□□□ -0.94
NR1I3-222ENST00000506018 TMEM27Q9HBJ8 222 aa9.15□□□□□ -0.94
NR1I3-222ENST00000506018 SLC17A5Q9NRA2 495 aa9.15□□□□□ -0.94
NR1I3-222ENST00000506018 CBLN4Q9NTU7 201 aa9.15□□□□□ -0.94
NR1I3-222ENST00000506018 VAPAQ9P0L0 249 aa9.15□□□□□ -0.94
NR1I3-222ENST00000506018 TESQ9UGI8 421 aaKnown RBP9.15□□□□□ -0.94
NR1I3-222ENST00000506018 ANGPT4Q9Y264 503 aa9.15□□□□□ -0.94
NR1I3-222ENST00000506018 NSD1Q96L73 2696 aaPredicted RBP9.15□□□□□ -0.94
NR1I3-222ENST00000506018 TLN2Q9Y4G6 2542 aa9.14□□□□□ -0.95
NR1I3-222ENST00000506018 TRBV5-3A0A0A0MS03 114 aa9.14□□□□□ -0.95
NR1I3-222ENST00000506018 A0A1W2PR80 420 aa9.14□□□□□ -0.95
NR1I3-222ENST00000506018 TMEM229AB2RXF0 380 aa9.14□□□□□ -0.95
NR1I3-222ENST00000506018 PDLIM1O00151 329 aa9.14□□□□□ -0.95
NR1I3-222ENST00000506018 PRG2P13727 222 aa9.14□□□□□ -0.95
NR1I3-222ENST00000506018 GPX2P18283 190 aa9.14□□□□□ -0.95
NR1I3-222ENST00000506018 CDH2P19022 906 aaPredicted RBP9.14□□□□□ -0.95
NR1I3-222ENST00000506018 TTKP33981 857 aa9.14□□□□□ -0.95
NR1I3-222ENST00000506018 NTF4P34130 210 aa9.14□□□□□ -0.95
NR1I3-222ENST00000506018 RPS5P46782 204 aaKnown RBP9.14□□□□□ -0.95
NR1I3-222ENST00000506018 FABP6P51161 128 aa9.14□□□□□ -0.95
NR1I3-222ENST00000506018 SLC7A2P52569 658 aa9.14□□□□□ -0.95
NR1I3-222ENST00000506018 SH3BGRP55822 239 aaPredicted RBP9.14□□□□□ -0.95
NR1I3-222ENST00000506018 IL1RL1Q01638 556 aa9.14□□□□□ -0.95
NR1I3-222ENST00000506018 CHRNB3Q05901 458 aa9.14□□□□□ -0.95
NR1I3-222ENST00000506018 TNK1Q13470 666 aa9.14□□□□□ -0.95
NR1I3-222ENST00000506018 C1DQ13901 141 aaKnown RBP9.14□□□□□ -0.95
NR1I3-222ENST00000506018 FAM69AQ5T7M9 428 aa9.14□□□□□ -0.95
NR1I3-222ENST00000506018 HMBOX1Q6NT76 420 aa9.14□□□□□ -0.95
NR1I3-222ENST00000506018 C8orf82Q6P1X6 216 aaPredicted RBP9.14□□□□□ -0.95
NR1I3-222ENST00000506018 NIPAL3Q6P499 406 aa9.14□□□□□ -0.95
NR1I3-222ENST00000506018 ERICH5Q6P6B1 374 aa9.14□□□□□ -0.95
NR1I3-222ENST00000506018 ULK3Q6PHR2 472 aa9.14□□□□□ -0.95
NR1I3-222ENST00000506018 DHRS4L2Q6PKH6 230 aa9.14□□□□□ -0.95
NR1I3-222ENST00000506018 CREB3L2Q70SY1 520 aa9.14□□□□□ -0.95
NR1I3-222ENST00000506018 ASRGL1Q7L266 308 aa9.14□□□□□ -0.95
NR1I3-222ENST00000506018 RANBP3LQ86VV4 465 aaPredicted RBP9.14□□□□□ -0.95
NR1I3-222ENST00000506018 SLC30A8Q8IWU4 369 aa9.14□□□□□ -0.95
NR1I3-222ENST00000506018 LSMEM1Q8N8F7 131 aa9.14□□□□□ -0.95
NR1I3-222ENST00000506018 HIPK4Q8NE63 616 aa9.14□□□□□ -0.95
NR1I3-222ENST00000506018 POP5Q969H6 163 aaKnown RBP9.14□□□□□ -0.95
NR1I3-222ENST00000506018 SLC47A1Q96FL8 570 aa9.14□□□□□ -0.95
NR1I3-222ENST00000506018 ZNF385AQ96PM9 386 aaKnown RBP9.14□□□□□ -0.95
NR1I3-222ENST00000506018 MUC13Q9H3R2 512 aa9.14□□□□□ -0.95
NR1I3-222ENST00000506018 TMEM38AQ9H6F2 299 aa9.14□□□□□ -0.95
NR1I3-222ENST00000506018 SLC25A37Q9NYZ2 338 aa9.14□□□□□ -0.95
NR1I3-222ENST00000506018 SLAMF8Q9P0V8 285 aa9.14□□□□□ -0.95
NR1I3-222ENST00000506018 ABCD2Q9UBJ2 740 aa9.14□□□□□ -0.95
NR1I3-222ENST00000506018 ATP23Q9Y6H3 246 aa9.14□□□□□ -0.95
NR1I3-222ENST00000506018 PMF1-BGLAPU3KQ54 211 aa9.14□□□□□ -0.95
NR1I3-222ENST00000506018 FXYD1O00168 92 aa9.13□□□□□ -0.95
NR1I3-222ENST00000506018 NPIPB7O75200 414 aa9.13□□□□□ -0.95
NR1I3-222ENST00000506018 SLC43A1O75387 559 aa9.13□□□□□ -0.95
NR1I3-222ENST00000506018 HOXB9P17482 250 aaPredicted RBP9.13□□□□□ -0.95
NR1I3-222ENST00000506018 NUDT6P53370 316 aa9.13□□□□□ -0.95
NR1I3-222ENST00000506018 RGS8P57771 180 aaPredicted RBP9.13□□□□□ -0.95
NR1I3-222ENST00000506018 DSCR9P59020 149 aa9.13□□□□□ -0.95
NR1I3-222ENST00000506018 RBBP4Q09028 425 aa9.13□□□□□ -0.95
NR1I3-222ENST00000506018 RAB35Q15286 201 aa9.13□□□□□ -0.95
NR1I3-222ENST00000506018 CYP51A1Q16850 503 aa9.13□□□□□ -0.95
NR1I3-222ENST00000506018 ALG10BQ5I7T1 473 aa9.13□□□□□ -0.95
NR1I3-222ENST00000506018 ARMC8Q8IUR7 673 aa9.13□□□□□ -0.95
NR1I3-222ENST00000506018 SLC15A3Q8IY34 581 aa9.13□□□□□ -0.95
NR1I3-222ENST00000506018 OXGR1Q96P68 337 aa9.13□□□□□ -0.95
NR1I3-222ENST00000506018 KCTD14Q9BQ13 255 aaPredicted RBP9.13□□□□□ -0.95
NR1I3-222ENST00000506018 CPPED1Q9BRF8 314 aaPredicted RBP9.13□□□□□ -0.95
NR1I3-222ENST00000506018 RHNO1Q9BSD3 238 aa9.13□□□□□ -0.95
NR1I3-222ENST00000506018 C1QTNF6Q9BXI9 259 aa9.13□□□□□ -0.95
NR1I3-222ENST00000506018 CADM1Q9BY67 442 aaKnown RBP9.13□□□□□ -0.95
NR1I3-222ENST00000506018 REG4Q9BYZ8 158 aa9.13□□□□□ -0.95
NR1I3-222ENST00000506018 LINC00470Q9BZP3 86 aa9.13□□□□□ -0.95
NR1I3-222ENST00000506018 RCE1Q9Y256 329 aa9.13□□□□□ -0.95
NR1I3-222ENST00000506018 B3GALT5Q9Y2C3 310 aa9.13□□□□□ -0.95
NR1I3-222ENST00000506018 CHST2Q9Y4C5 530 aa9.13□□□□□ -0.95
NR1I3-222ENST00000506018 CSPG4Q6UVK1 2322 aa9.13□□□□□ -0.95
NR1I3-222ENST00000506018 CHD3Q12873 2000 aaKnown RBP9.13□□□□□ -0.95
NR1I3-222ENST00000506018 TRAV36DV7A0A075B6V5 113 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms