RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 ITPKBP27987 946 aa10.85□□□□□ -0.67
UBE3D-206ENST00000505226 S100A11P31949 105 aa10.85□□□□□ -0.67
UBE3D-206ENST00000505226 GJA4P35212 333 aa10.85□□□□□ -0.67
UBE3D-206ENST00000505226 RBM34P42696 430 aaKnown RBP10.85□□□□□ -0.67
UBE3D-206ENST00000505226 SGCGQ13326 291 aa10.85□□□□□ -0.67
UBE3D-206ENST00000505226 RD3Q7Z3Z2 195 aa10.85□□□□□ -0.67
UBE3D-206ENST00000505226 LRRTM1Q86UE6 522 aa10.85□□□□□ -0.67
UBE3D-206ENST00000505226 IQCF2Q8IXL9 164 aa10.85□□□□□ -0.67
UBE3D-206ENST00000505226 PNPLA2Q96AD5 504 aa10.85□□□□□ -0.67
UBE3D-206ENST00000505226 MIB2Q96AX9 1013 aa10.85□□□□□ -0.67
UBE3D-206ENST00000505226 ANKRD9Q96BM1 317 aaPredicted RBP10.85□□□□□ -0.67
UBE3D-206ENST00000505226 MYADMQ96S97 322 aa10.85□□□□□ -0.67
UBE3D-206ENST00000505226 C14orf105Q9NVL8 296 aa10.85□□□□□ -0.67
UBE3D-206ENST00000505226 AKAP7Q9P0M2 348 aaPredicted RBP10.85□□□□□ -0.67
UBE3D-206ENST00000505226 COLEC10Q9Y6Z7 277 aa10.85□□□□□ -0.67
UBE3D-206ENST00000505226 MPDZO75970 2070 aa10.85□□□□□ -0.67
UBE3D-206ENST00000505226 TMEM272A0A1B0GTI8 110 aa10.85□□□□□ -0.67
UBE3D-206ENST00000505226 GRXCR1A8MXD5 290 aa10.85□□□□□ -0.67
UBE3D-206ENST00000505226 H0Y8X5 98 aa10.85□□□□□ -0.67
UBE3D-206ENST00000505226 DCTN6O00399 190 aa10.85□□□□□ -0.67
UBE3D-206ENST00000505226 FOXS1O43638 330 aa10.85□□□□□ -0.67
UBE3D-206ENST00000505226 CTNSO60931 367 aa10.85□□□□□ -0.67
UBE3D-206ENST00000505226 UPK3AO75631 287 aa10.85□□□□□ -0.67
UBE3D-206ENST00000505226 B3GALNT1O75752 331 aa10.85□□□□□ -0.67
UBE3D-206ENST00000505226 NKX2-2O95096 273 aa10.85□□□□□ -0.67
UBE3D-206ENST00000505226 IL5P05113 134 aa10.85□□□□□ -0.67
UBE3D-206ENST00000505226 GABRA1P14867 456 aa10.85□□□□□ -0.67
UBE3D-206ENST00000505226 S1PR1P21453 382 aa10.85□□□□□ -0.67
UBE3D-206ENST00000505226 EFNB2P52799 333 aa10.85□□□□□ -0.67
UBE3D-206ENST00000505226 ADPRHP54922 357 aa10.85□□□□□ -0.67
UBE3D-206ENST00000505226 STX4Q12846 297 aa10.85□□□□□ -0.67
UBE3D-206ENST00000505226 PDGFRLQ15198 375 aa10.85□□□□□ -0.67
UBE3D-206ENST00000505226 YOD1Q5VVQ6 348 aaPredicted RBP10.85□□□□□ -0.67
UBE3D-206ENST00000505226 ATRAIDQ6UW56 229 aa10.85□□□□□ -0.67
UBE3D-206ENST00000505226 TFAP2EQ6VUC0 442 aa10.85□□□□□ -0.67
UBE3D-206ENST00000505226 GLB1L2Q8IW92 636 aa10.85□□□□□ -0.67
UBE3D-206ENST00000505226 OR51A4Q8NGJ6 313 aa10.85□□□□□ -0.67
UBE3D-206ENST00000505226 OR14C36Q8NHC7 312 aa10.85□□□□□ -0.67
UBE3D-206ENST00000505226 ZDHHC1Q8WTX9 485 aa10.85□□□□□ -0.67
UBE3D-206ENST00000505226 NKX3-1Q99801 234 aaPredicted RBP10.85□□□□□ -0.67
UBE3D-206ENST00000505226 CHST6Q9GZX3 395 aa10.85□□□□□ -0.67
UBE3D-206ENST00000505226 KCNK15Q9H427 330 aa10.85□□□□□ -0.67
UBE3D-206ENST00000505226 MRM2Q9UI43 246 aaKnown RBP10.85□□□□□ -0.67
UBE3D-206ENST00000505226 FBXL2Q9UKC9 423 aa10.85□□□□□ -0.67
UBE3D-206ENST00000505226 PRSS38A1L453 326 aa10.85□□□□□ -0.67
UBE3D-206ENST00000505226 SNRPGP15A8MWD9 76 aa10.85□□□□□ -0.67
UBE3D-206ENST00000505226 H0YGG7 62 aa10.85□□□□□ -0.67
UBE3D-206ENST00000505226 PDCD5O14737 125 aa10.85□□□□□ -0.67
UBE3D-206ENST00000505226 SULT1B1O43704 296 aa10.85□□□□□ -0.67
UBE3D-206ENST00000505226 IGF2P01344 180 aa10.85□□□□□ -0.67
UBE3D-206ENST00000505226 ZNF35P13682 527 aa10.85□□□□□ -0.67
UBE3D-206ENST00000505226 ART1P52961 327 aa10.85□□□□□ -0.67
UBE3D-206ENST00000505226 ARF3P61204 181 aaPredicted RBP10.85□□□□□ -0.67
UBE3D-206ENST00000505226 GUCA2AQ02747 115 aa10.85□□□□□ -0.67
UBE3D-206ENST00000505226 ILF3Q12906 894 aaKnown RBP eCLIP10.85□□□□□ -0.67
UBE3D-206ENST00000505226 GAS6Q14393 721 aa10.85□□□□□ -0.67
UBE3D-206ENST00000505226 OVCH2Q7RTZ1 564 aa10.85□□□□□ -0.67
UBE3D-206ENST00000505226 MUC20Q8N307 709 aaPredicted RBP10.85□□□□□ -0.67
UBE3D-206ENST00000505226 ESX1Q8N693 406 aa10.85□□□□□ -0.67
UBE3D-206ENST00000505226 EID2Q8N6I1 236 aa10.85□□□□□ -0.67
UBE3D-206ENST00000505226 OR4C16Q8NGL9 310 aa10.85□□□□□ -0.67
UBE3D-206ENST00000505226 OR10G6Q8NH81 332 aa10.85□□□□□ -0.67
UBE3D-206ENST00000505226 OR1S1Q8NH92 325 aa10.85□□□□□ -0.67
UBE3D-206ENST00000505226 OR1E3Q8WZA6 343 aa10.85□□□□□ -0.67
UBE3D-206ENST00000505226 FAM3CQ92520 227 aa10.85□□□□□ -0.67
UBE3D-206ENST00000505226 GPR160Q9UJ42 338 aa10.85□□□□□ -0.67
UBE3D-206ENST00000505226 ARHGEF17Q96PE2 2063 aaPredicted RBP10.85□□□□□ -0.67
UBE3D-206ENST00000505226 CACNA1CQ13936 2221 aa10.84□□□□□ -0.67
UBE3D-206ENST00000505226 TMEM72A0PK05 275 aa10.84□□□□□ -0.67
UBE3D-206ENST00000505226 MEIS3P1A6NDR6 274 aa10.84□□□□□ -0.67
UBE3D-206ENST00000505226 CHURC1-FNTBB4DL54 471 aa10.84□□□□□ -0.67
UBE3D-206ENST00000505226 ACOT7O00154 380 aa10.84□□□□□ -0.67
UBE3D-206ENST00000505226 GLSO94925 669 aaPredicted RBP10.84□□□□□ -0.67
UBE3D-206ENST00000505226 RPS27P42677 84 aaKnown RBP10.84□□□□□ -0.67
UBE3D-206ENST00000505226 MAT1AQ00266 395 aaKnown RBP10.84□□□□□ -0.67
UBE3D-206ENST00000505226 ZNF273Q14593 569 aa10.84□□□□□ -0.67
UBE3D-206ENST00000505226 NNATQ16517 81 aa10.84□□□□□ -0.67
UBE3D-206ENST00000505226 FIGLAQ6QHK4 219 aa10.84□□□□□ -0.67
UBE3D-206ENST00000505226 CFAP77Q6ZQR2 320 aa10.84□□□□□ -0.67
UBE3D-206ENST00000505226 SFTPA2Q8IWL1 248 aa10.84□□□□□ -0.67
UBE3D-206ENST00000505226 SLC35F3Q8IY50 421 aa10.84□□□□□ -0.67
UBE3D-206ENST00000505226 PHYHIPQ92561 330 aa10.84□□□□□ -0.67
UBE3D-206ENST00000505226 FGF13Q92913 245 aa10.84□□□□□ -0.67
UBE3D-206ENST00000505226 FBXW5Q969U6 566 aa10.84□□□□□ -0.67
UBE3D-206ENST00000505226 SGTBQ96EQ0 304 aa10.84□□□□□ -0.67
UBE3D-206ENST00000505226 SCARF2Q96GP6 870 aaPredicted RBP10.84□□□□□ -0.67
UBE3D-206ENST00000505226 GINS4Q9BRT9 223 aa10.84□□□□□ -0.67
UBE3D-206ENST00000505226 TRIM2Q9C040 744 aa10.84□□□□□ -0.67
UBE3D-206ENST00000505226 ARL6Q9H0F7 186 aa10.84□□□□□ -0.67
UBE3D-206ENST00000505226 MED9Q9NWA0 146 aa10.84□□□□□ -0.67
UBE3D-206ENST00000505226 FXYD6-FXYD2A0A087WZ82 144 aa10.84□□□□□ -0.67
UBE3D-206ENST00000505226 A0A1B0GTQ1 180 aa10.84□□□□□ -0.67
UBE3D-206ENST00000505226 TNFSF14O43557 240 aa10.84□□□□□ -0.67
UBE3D-206ENST00000505226 PRKNO60260 465 aaPredicted RBP10.84□□□□□ -0.67
UBE3D-206ENST00000505226 FKTNO75072 461 aa10.84□□□□□ -0.67
UBE3D-206ENST00000505226 ITGA10O75578 1167 aa10.84□□□□□ -0.67
UBE3D-206ENST00000505226 FGF2P09038 288 aa10.84□□□□□ -0.67
UBE3D-206ENST00000505226 CALCRP30988 508 aa10.84□□□□□ -0.67
UBE3D-206ENST00000505226 RPS21P63220 83 aaKnown RBP10.84□□□□□ -0.67
UBE3D-206ENST00000505226 PRRT3Q5FWE3 981 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms