RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 RIPK1Q13546 671 aa4.38□□□□□ -1.71
LMNB1-208ENST00000504788 C4orf17Q53FE4 359 aa4.38□□□□□ -1.71
LMNB1-208ENST00000504788 PHYHD1Q5SRE7 291 aa4.38□□□□□ -1.71
LMNB1-208ENST00000504788 OTUD3Q5T2D3 398 aaPredicted RBP4.38□□□□□ -1.71
LMNB1-208ENST00000504788 RIPPLY2Q5TAB7 128 aa4.38□□□□□ -1.71
LMNB1-208ENST00000504788 ZNF585AQ6P3V2 769 aa4.38□□□□□ -1.71
LMNB1-208ENST00000504788 SEZ6L2Q6UXD5 910 aa4.38□□□□□ -1.71
LMNB1-208ENST00000504788 ZNF620Q6ZNG0 422 aa4.38□□□□□ -1.71
LMNB1-208ENST00000504788 C22orf34Q6ZV56 151 aa4.38□□□□□ -1.71
LMNB1-208ENST00000504788 H1FNTQ75WM6 255 aaPredicted RBP4.38□□□□□ -1.71
LMNB1-208ENST00000504788 LINGO2Q7L985 606 aa4.38□□□□□ -1.71
LMNB1-208ENST00000504788 NUFIP2Q7Z417 695 aaKnown RBP4.38□□□□□ -1.71
LMNB1-208ENST00000504788 PXKQ7Z7A4 578 aa4.38□□□□□ -1.71
LMNB1-208ENST00000504788 TUSC5Q8IXB3 177 aa4.38□□□□□ -1.71
LMNB1-208ENST00000504788 GCNT2Q8N0V5 402 aa4.38□□□□□ -1.71
LMNB1-208ENST00000504788 CLDN22Q8N7P3 220 aa4.38□□□□□ -1.71
LMNB1-208ENST00000504788 OR5J2Q8NH18 312 aa4.38□□□□□ -1.71
LMNB1-208ENST00000504788 ZNF519Q8TB69 540 aa4.38□□□□□ -1.71
LMNB1-208ENST00000504788 ITLN2Q8WWU7 325 aaPredicted RBP4.38□□□□□ -1.71
LMNB1-208ENST00000504788 TMEM45BQ96B21 275 aa4.38□□□□□ -1.71
LMNB1-208ENST00000504788 TXNDC15Q96J42 360 aa4.38□□□□□ -1.71
LMNB1-208ENST00000504788 TNFRSF13CQ96RJ3 184 aa4.38□□□□□ -1.71
LMNB1-208ENST00000504788 TRIB1Q96RU8 372 aa4.38□□□□□ -1.71
LMNB1-208ENST00000504788 KLHL4Q9C0H6 718 aa4.38□□□□□ -1.71
LMNB1-208ENST00000504788 SEMA6AQ9H2E6 1030 aa4.38□□□□□ -1.71
LMNB1-208ENST00000504788 REEP1Q9H902 201 aa4.38□□□□□ -1.71
LMNB1-208ENST00000504788 CACYBPQ9HB71 228 aaKnown RBP4.38□□□□□ -1.71
LMNB1-208ENST00000504788 CHST11Q9NPF2 352 aa4.38□□□□□ -1.71
LMNB1-208ENST00000504788 NANSQ9NR45 359 aa4.38□□□□□ -1.71
LMNB1-208ENST00000504788 STX18Q9P2W9 335 aaKnown RBP4.38□□□□□ -1.71
LMNB1-208ENST00000504788 STOML1Q9UBI4 398 aa4.38□□□□□ -1.71
LMNB1-208ENST00000504788 RPS6KB2Q9UBS0 482 aa4.38□□□□□ -1.71
LMNB1-208ENST00000504788 OAZ3Q9UMX2 235 aa4.38□□□□□ -1.71
LMNB1-208ENST00000504788 RNF6Q9Y252 685 aa4.38□□□□□ -1.71
LMNB1-208ENST00000504788 CORINQ9Y5Q5 1042 aa4.38□□□□□ -1.71
LMNB1-208ENST00000504788 RTTNQ86VV8 2226 aa4.38□□□□□ -1.71
LMNB1-208ENST00000504788 DOPEY2Q9Y3R5 2298 aa4.38□□□□□ -1.71
LMNB1-208ENST00000504788 ANKHD1Q8IWZ3 2542 aaKnown RBP4.37□□□□□ -1.71
LMNB1-208ENST00000504788 IGKV1D-43A0A0B4J1Z2 117 aa4.37□□□□□ -1.71
LMNB1-208ENST00000504788 FAM47E-STBD1D6RA91 191 aa4.37□□□□□ -1.71
LMNB1-208ENST00000504788 SOCS2O14508 198 aa4.37□□□□□ -1.71
LMNB1-208ENST00000504788 IMPA2O14732 288 aa4.37□□□□□ -1.71
LMNB1-208ENST00000504788 ARPC3O15145 178 aa4.37□□□□□ -1.71
LMNB1-208ENST00000504788 LRRTM2O43300 516 aa4.37□□□□□ -1.71
LMNB1-208ENST00000504788 CIB2O75838 187 aa4.37□□□□□ -1.71
LMNB1-208ENST00000504788 VAMP5O95183 116 aa4.37□□□□□ -1.71
LMNB1-208ENST00000504788 TXNDC12O95881 172 aa4.37□□□□□ -1.71
LMNB1-208ENST00000504788 IL18BPO95998 194 aa4.37□□□□□ -1.71
LMNB1-208ENST00000504788 ADAP00813 363 aa4.37□□□□□ -1.71
LMNB1-208ENST00000504788 YES1P07947 543 aa4.37□□□□□ -1.71
LMNB1-208ENST00000504788 TFPIP10646 304 aa4.37□□□□□ -1.71
LMNB1-208ENST00000504788 CD8BP10966 210 aa4.37□□□□□ -1.71
LMNB1-208ENST00000504788 ANPEPP15144 967 aa4.37□□□□□ -1.71
LMNB1-208ENST00000504788 IGFBP2P18065 325 aa4.37□□□□□ -1.71
LMNB1-208ENST00000504788 CCKARP32238 428 aa4.37□□□□□ -1.71
LMNB1-208ENST00000504788 POLR2IP36954 125 aaKnown RBP4.37□□□□□ -1.71
LMNB1-208ENST00000504788 AQP2P41181 271 aa4.37□□□□□ -1.71
LMNB1-208ENST00000504788 RPS3AP61247 264 aaKnown RBP4.37□□□□□ -1.71
LMNB1-208ENST00000504788 PUDPQ08623 228 aa4.37□□□□□ -1.71
LMNB1-208ENST00000504788 DBPQ10586 325 aaPredicted RBP4.37□□□□□ -1.71
LMNB1-208ENST00000504788 PMPCAQ10713 525 aa4.37□□□□□ -1.71
LMNB1-208ENST00000504788 MFSD13AQ14CX5 517 aa4.37□□□□□ -1.71
LMNB1-208ENST00000504788 FBXL19-AS1Q494R0 122 aa4.37□□□□□ -1.71
LMNB1-208ENST00000504788 ANKDD1AQ495B1 522 aa4.37□□□□□ -1.71
LMNB1-208ENST00000504788 MESTQ5EB52 335 aa4.37□□□□□ -1.71
LMNB1-208ENST00000504788 FGD3Q5JSP0 725 aa4.37□□□□□ -1.71
LMNB1-208ENST00000504788 ZNF474Q6S9Z5 364 aaPredicted RBP4.37□□□□□ -1.71
LMNB1-208ENST00000504788 TFAP2EQ6VUC0 442 aa4.37□□□□□ -1.71
LMNB1-208ENST00000504788 ZNF730Q6ZMV8 503 aa4.37□□□□□ -1.71
LMNB1-208ENST00000504788 RASSF6Q6ZTQ3 369 aa4.37□□□□□ -1.71
LMNB1-208ENST00000504788 FAM214BQ7L5A3 538 aa4.37□□□□□ -1.71
LMNB1-208ENST00000504788 MAMDC2Q7Z304 686 aaPredicted RBP4.37□□□□□ -1.71
LMNB1-208ENST00000504788 BTLAQ7Z6A9 289 aa4.37□□□□□ -1.71
LMNB1-208ENST00000504788 FJX1Q86VR8 437 aa4.37□□□□□ -1.71
LMNB1-208ENST00000504788 CCDC71Q8IV32 467 aaPredicted RBP4.37□□□□□ -1.71
LMNB1-208ENST00000504788 GABRG1Q8N1C3 465 aa4.37□□□□□ -1.71
LMNB1-208ENST00000504788 SLC43A2Q8N370 569 aa4.37□□□□□ -1.71
LMNB1-208ENST00000504788 PARP8Q8N3A8 854 aa4.37□□□□□ -1.71
LMNB1-208ENST00000504788 AQP11Q8NBQ7 271 aa4.37□□□□□ -1.71
LMNB1-208ENST00000504788 OR10G2Q8NGC3 310 aa4.37□□□□□ -1.71
LMNB1-208ENST00000504788 OR9K2Q8NGE7 335 aa4.37□□□□□ -1.71
LMNB1-208ENST00000504788 OR4Q3Q8NH05 313 aa4.37□□□□□ -1.71
LMNB1-208ENST00000504788 OR5K1Q8NHB7 308 aa4.37□□□□□ -1.71
LMNB1-208ENST00000504788 GIPC3Q8TF64 312 aa4.37□□□□□ -1.71
LMNB1-208ENST00000504788 INTS12Q96CB8 462 aaKnown RBP4.37□□□□□ -1.71
LMNB1-208ENST00000504788 SLC25A36Q96CQ1 311 aa4.37□□□□□ -1.71
LMNB1-208ENST00000504788 ZNF837Q96EG3 531 aaPredicted RBP4.37□□□□□ -1.71
LMNB1-208ENST00000504788 SGTBQ96EQ0 304 aa4.37□□□□□ -1.71
LMNB1-208ENST00000504788 GMPPAQ96IJ6 420 aaPredicted RBP4.37□□□□□ -1.71
LMNB1-208ENST00000504788 BOD1Q96IK1 185 aa4.37□□□□□ -1.71
LMNB1-208ENST00000504788 RSRC1Q96IZ7 334 aaKnown RBP4.37□□□□□ -1.71
LMNB1-208ENST00000504788 ZFP3Q96NJ6 502 aa4.37□□□□□ -1.71
LMNB1-208ENST00000504788 OR52D1Q9H346 318 aa4.37□□□□□ -1.71
LMNB1-208ENST00000504788 NELFAQ9H3P2 528 aa4.37□□□□□ -1.71
LMNB1-208ENST00000504788 PLSCR4Q9NRQ2 329 aa4.37□□□□□ -1.71
LMNB1-208ENST00000504788 MED29Q9NX70 200 aa4.37□□□□□ -1.71
LMNB1-208ENST00000504788 USE1Q9NZ43 259 aa4.37□□□□□ -1.71
LMNB1-208ENST00000504788 PDP1Q9P0J1 537 aaPredicted RBP4.37□□□□□ -1.71
LMNB1-208ENST00000504788 MALT1Q9UDY8 824 aa4.37□□□□□ -1.71
LMNB1-208ENST00000504788 ZNF629Q9UEG4 869 aaPredicted RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms