RNA–Protein interactions for RNA: ENST00000504554.1

RFC1-207, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-207ENST00000504554 TRIM2Q9C040 744 aa7.03□□□□□ -1.28
RFC1-207ENST00000504554 MRPL18Q9H0U6 180 aaKnown RBP7.03□□□□□ -1.28
RFC1-207ENST00000504554 MYLK2Q9H1R3 596 aa7.03□□□□□ -1.28
RFC1-207ENST00000504554 ARMC7Q9H6L4 198 aa7.03□□□□□ -1.28
RFC1-207ENST00000504554 C12orf10Q9HB07 376 aa7.03□□□□□ -1.28
RFC1-207ENST00000504554 CACYBPQ9HB71 228 aaKnown RBP7.03□□□□□ -1.28
RFC1-207ENST00000504554 EMC3Q9P0I2 261 aa7.03□□□□□ -1.28
RFC1-207ENST00000504554 RPS6KB2Q9UBS0 482 aa7.03□□□□□ -1.28
RFC1-207ENST00000504554 MALT1Q9UDY8 824 aa7.03□□□□□ -1.28
RFC1-207ENST00000504554 TESQ9UGI8 421 aaKnown RBP7.03□□□□□ -1.28
RFC1-207ENST00000504554 PRDM4Q9UKN5 801 aa7.03□□□□□ -1.28
RFC1-207ENST00000504554 SLC25A15Q9Y619 301 aa7.03□□□□□ -1.28
RFC1-207ENST00000504554 CAPN7Q9Y6W3 813 aa7.03□□□□□ -1.28
RFC1-207ENST00000504554 ABCA4P78363 2273 aa7.03□□□□□ -1.28
RFC1-207ENST00000504554 FREM1Q5H8C1 2179 aa7.02□□□□□ -1.29
RFC1-207ENST00000504554 TRAV36DV7A0A075B6V5 113 aa7.02□□□□□ -1.29
RFC1-207ENST00000504554 PRORSD1PA6NEY8 169 aa7.02□□□□□ -1.29
RFC1-207ENST00000504554 OR5H1A6NKK0 313 aa7.02□□□□□ -1.29
RFC1-207ENST00000504554 CPSF4LA6NMK7 179 aaKnown RBP7.02□□□□□ -1.29
RFC1-207ENST00000504554 BBIP1A8MTZ0 92 aa7.02□□□□□ -1.29
RFC1-207ENST00000504554 SHOX2O60902 331 aaPredicted RBP7.02□□□□□ -1.29
RFC1-207ENST00000504554 UPK3AO75631 287 aa7.02□□□□□ -1.29
RFC1-207ENST00000504554 SERPINB7O75635 380 aa7.02□□□□□ -1.29
RFC1-207ENST00000504554 ZNF432O94892 652 aa7.02□□□□□ -1.29
RFC1-207ENST00000504554 AHSA1O95433 338 aa7.02□□□□□ -1.29
RFC1-207ENST00000504554 COX4I1P13073 169 aa7.02□□□□□ -1.29
RFC1-207ENST00000504554 GGT1P19440 569 aa7.02□□□□□ -1.29
RFC1-207ENST00000504554 HOXC12P31275 282 aa7.02□□□□□ -1.29
RFC1-207ENST00000504554 BSPH1Q075Z2 132 aa7.02□□□□□ -1.29
RFC1-207ENST00000504554 SPOCK1Q08629 439 aa7.02□□□□□ -1.29
RFC1-207ENST00000504554 PPA1Q15181 289 aa7.02□□□□□ -1.29
RFC1-207ENST00000504554 MMEL1Q495T6 779 aa7.02□□□□□ -1.29
RFC1-207ENST00000504554 ENTPD8Q5MY95 495 aa7.02□□□□□ -1.29
RFC1-207ENST00000504554 PHYHD1Q5SRE7 291 aa7.02□□□□□ -1.29
RFC1-207ENST00000504554 ZBTB37Q5TC79 503 aa7.02□□□□□ -1.29
RFC1-207ENST00000504554 FAM91A1Q658Y4 838 aa7.02□□□□□ -1.29
RFC1-207ENST00000504554 ULK3Q6PHR2 472 aa7.02□□□□□ -1.29
RFC1-207ENST00000504554 AAED1Q7RTV5 226 aa7.02□□□□□ -1.29
RFC1-207ENST00000504554 SPATA21Q7Z572 469 aa7.02□□□□□ -1.29
RFC1-207ENST00000504554 PATL1Q86TB9 770 aaKnown RBP7.02□□□□□ -1.29
RFC1-207ENST00000504554 KBTBD8Q8NFY9 601 aa7.02□□□□□ -1.29
RFC1-207ENST00000504554 OR52N5Q8NH56 324 aa7.02□□□□□ -1.29
RFC1-207ENST00000504554 DNAJA4Q8WW22 397 aaPredicted RBP7.02□□□□□ -1.29
RFC1-207ENST00000504554 HSD17B8Q92506 261 aa7.02□□□□□ -1.29
RFC1-207ENST00000504554 AKAP1Q92667 903 aaKnown RBP eCLIP7.02□□□□□ -1.29
RFC1-207ENST00000504554 MUS81Q96NY9 551 aa7.02□□□□□ -1.29
RFC1-207ENST00000504554 ALPK1Q96QP1 1244 aa7.02□□□□□ -1.29
RFC1-207ENST00000504554 PRSS27Q9BQR3 290 aa7.02□□□□□ -1.29
RFC1-207ENST00000504554 SF3B5Q9BWJ5 86 aaKnown RBP7.02□□□□□ -1.29
RFC1-207ENST00000504554 TAPBPLQ9BX59 468 aa7.02□□□□□ -1.29
RFC1-207ENST00000504554 C1QTNF6Q9BXI9 259 aa7.02□□□□□ -1.29
RFC1-207ENST00000504554 AMBRA1Q9C0C7 1298 aa7.02□□□□□ -1.29
RFC1-207ENST00000504554 TMEM27Q9HBJ8 222 aa7.02□□□□□ -1.29
RFC1-207ENST00000504554 ASB6Q9NWX5 421 aa7.02□□□□□ -1.29
RFC1-207ENST00000504554 SLC9A8Q9Y2E8 581 aa7.02□□□□□ -1.29
RFC1-207ENST00000504554 ANKRD17O75179 2603 aaKnown RBP7.02□□□□□ -1.29
RFC1-207ENST00000504554 TEP1Q99973 2627 aaKnown RBP7.01□□□□□ -1.29
RFC1-207ENST00000504554 DNHD1Q96M86 4753 aa7.01□□□□□ -1.29
RFC1-207ENST00000504554 F8P00451 2351 aa7.01□□□□□ -1.29
RFC1-207ENST00000504554 FAM220BPB1ANY3 271 aa7.01□□□□□ -1.29
RFC1-207ENST00000504554 SHISA9B4DS77 424 aa7.01□□□□□ -1.29
RFC1-207ENST00000504554 F8W735 103 aaPredicted RBP7.01□□□□□ -1.29
RFC1-207ENST00000504554 AIM2O14862 343 aa7.01□□□□□ -1.29
RFC1-207ENST00000504554 SLC22A2O15244 555 aa7.01□□□□□ -1.29
RFC1-207ENST00000504554 CLOCKO15516 846 aa7.01□□□□□ -1.29
RFC1-207ENST00000504554 TRAF3IP2O43734 574 aaPredicted RBP7.01□□□□□ -1.29
RFC1-207ENST00000504554 FMO6PO60774 539 aa7.01□□□□□ -1.29
RFC1-207ENST00000504554 CNOT4O95628 575 aaKnown RBP7.01□□□□□ -1.29
RFC1-207ENST00000504554 C8BP07358 591 aa7.01□□□□□ -1.29
RFC1-207ENST00000504554 SOD3P08294 240 aa7.01□□□□□ -1.29
RFC1-207ENST00000504554 OR1E2P47887 323 aa7.01□□□□□ -1.29
RFC1-207ENST00000504554 CLDN17P56750 224 aa7.01□□□□□ -1.29
RFC1-207ENST00000504554 FOXD4Q12950 439 aaPredicted RBP7.01□□□□□ -1.29
RFC1-207ENST00000504554 MAPRE2Q15555 327 aa7.01□□□□□ -1.29
RFC1-207ENST00000504554 FXNQ16595 210 aa7.01□□□□□ -1.29
RFC1-207ENST00000504554 HIKESHIQ53FT3 197 aa7.01□□□□□ -1.29
RFC1-207ENST00000504554 TIMM23BQ5SRD1 257 aa7.01□□□□□ -1.29
RFC1-207ENST00000504554 FAM69AQ5T7M9 428 aa7.01□□□□□ -1.29
RFC1-207ENST00000504554 TMEM225Q6GV28 225 aa7.01□□□□□ -1.29
RFC1-207ENST00000504554 ADAM5Q6NVV9 412 aa7.01□□□□□ -1.29
RFC1-207ENST00000504554 NIPAL3Q6P499 406 aa7.01□□□□□ -1.29
RFC1-207ENST00000504554 CARM1Q86X55 608 aa7.01□□□□□ -1.29
RFC1-207ENST00000504554 TGIF2LYQ8IUE0 185 aa7.01□□□□□ -1.29
RFC1-207ENST00000504554 NKAIN4Q8IVV8 208 aa7.01□□□□□ -1.29
RFC1-207ENST00000504554 SLC30A8Q8IWU4 369 aa7.01□□□□□ -1.29
RFC1-207ENST00000504554 MRPL41Q8IXM3 137 aaKnown RBP7.01□□□□□ -1.29
RFC1-207ENST00000504554 SLC15A3Q8IY34 581 aa7.01□□□□□ -1.29
RFC1-207ENST00000504554 LILRB2Q8N423 598 aa7.01□□□□□ -1.29
RFC1-207ENST00000504554 RP9Q8TA86 221 aaKnown RBP7.01□□□□□ -1.29
RFC1-207ENST00000504554 ADAMTS16Q8TE57 1224 aa7.01□□□□□ -1.29
RFC1-207ENST00000504554 SLC47A1Q96FL8 570 aa7.01□□□□□ -1.29
RFC1-207ENST00000504554 SLC41A3Q96GZ6 507 aa7.01□□□□□ -1.29
RFC1-207ENST00000504554 TXNDC15Q96J42 360 aa7.01□□□□□ -1.29
RFC1-207ENST00000504554 FANCD2OSQ96PS1 177 aa7.01□□□□□ -1.29
RFC1-207ENST00000504554 CCL19Q99731 98 aa7.01□□□□□ -1.29
RFC1-207ENST00000504554 ECSITQ9BQ95 431 aa7.01□□□□□ -1.29
RFC1-207ENST00000504554 FAM107BQ9H098 131 aa7.01□□□□□ -1.29
RFC1-207ENST00000504554 PCDHAC1Q9H158 963 aa7.01□□□□□ -1.29
RFC1-207ENST00000504554 SLCO5A1Q9H2Y9 848 aa7.01□□□□□ -1.29
RFC1-207ENST00000504554 NELFAQ9H3P2 528 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms