RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 SCAIQ8N9R8 606 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 SDR9C7Q8NEX9 313 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 OR52E2Q8NGJ4 325 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 OR52I1Q8NGK6 324 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 OR9Q1Q8NGQ5 310 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 OR4K13Q8NH42 304 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 SLC25A43Q8WUT9 341 aaPredicted RBP6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 IPCEF1Q8WWN9 437 aaPredicted RBP6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 MUL1Q969V5 352 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 MIB2Q96AX9 1013 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 DDIT4LQ96D03 193 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 LGALS12Q96DT0 336 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 ADGRG7Q96K78 797 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 OR5B2Q96R09 309 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 NMNAT3Q96T66 252 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 TIMP4Q99727 224 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 ZNF649Q9BS31 505 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 CDCA4Q9BXL8 241 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 PRRG3Q9BZD7 231 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 CHST11Q9NPF2 352 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 FANCFQ9NPI8 374 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 ACOT13Q9NPJ3 140 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 BATF3Q9NR55 127 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 MRPS18AQ9NVS2 196 aaKnown RBP6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 ALKBH4Q9NXW9 302 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 SCN3BQ9NY72 215 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 ZNF346Q9UL40 294 aaKnown RBP6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 BOKQ9UMX3 212 aaPredicted RBP6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 LSM2Q9Y333 95 aaKnown RBP6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 MRPS18CQ9Y3D5 142 aaKnown RBP6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 LIPGQ9Y5X9 500 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 LAMA5O15230 3695 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 DNAJC13O75165 2243 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 CEP295Q9C0D2 2601 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 BSNQ9UPA5 3926 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 ACACAQ13085 2346 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 LOC100996750A0A140TA64 210 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 A0A1W2PNV4 684 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 EFCAB10A6NFE3 127 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 RIIAD1A6NNX1 92 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 H7C1C5 153 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 K7EM74 188 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 IDH3BO43837 385 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 OR2T1O43869 369 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 MRPS14O60783 128 aaKnown RBP6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 WISP2O76076 250 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 PMS2P2O95744 297 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 PTHP01270 115 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 HPNP05981 417 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 ADORA3P0DMS8 318 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 PSKH1P11801 424 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 GDF1P27539 372 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 GSTT1P30711 240 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 SDHAP31040 664 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 RPL4P36578 427 aaKnown RBP6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 CD79BP40259 229 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 EIF2S3P41091 472 aaKnown RBP6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 MAGEA5P43359 124 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 STARP49675 285 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 CLK1P49759 484 aaKnown RBP6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 DIO1P49895 249 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 SUCLG1P53597 346 aaKnown RBP6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 CDH11P55287 796 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 CLDN20P56880 219 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 LCN6P62502 163 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 RAC1P63000 192 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 ARG2P78540 354 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 H3F3AP84243 136 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 PMP22Q01453 160 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 PUDPQ08623 228 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 ZP4Q12836 540 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 KRR1Q13601 381 aaKnown RBP6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 MELKQ14680 651 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 RAB39AQ14964 217 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 TBCEQ15813 527 aaPredicted RBP6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 ACKR1Q16570 336 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 ZNF766Q5HY98 468 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 LINC01590Q5TEZ4 76 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 LYPD4Q6UWN0 246 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 TMPPEQ6ZT21 453 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 H1FNTQ75WM6 255 aaPredicted RBP6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 TMEM99Q8N816 258 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 ZFP62Q8NB50 900 aaPredicted RBP6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 ADPRHL1Q8NDY3 354 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 OR4F15Q8NGB8 312 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 OR13F1Q8NGS4 319 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 OR14L1PQ8NHC6 308 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 RNFT2Q96EX2 444 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 PLEKHA8Q96JA3 519 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 Q96MT0 163 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 TSSK2Q96PF2 358 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 SMAD5Q99717 465 aaKnown RBP6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 PIGQQ9BRB3 760 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 ASPNQ9BXN1 380 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 SRXN1Q9BYN0 137 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 KRTAP4-6Q9BYQ5 205 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 CCDC90BQ9GZT6 254 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 SLC6A15Q9H2J7 730 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 FGF20Q9NP95 211 aaPredicted RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms