RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 ITGA5P08648 1049 aa16.06■□□□□ 0.16
PDLIM7-209ENST00000503346 IL1RL1Q01638 556 aa16.06■□□□□ 0.16
PDLIM7-209ENST00000503346 LRRC17Q8N6Y2 441 aa16.06■□□□□ 0.16
PDLIM7-209ENST00000503346 PIK3C3Q8NEB9 887 aa16.06■□□□□ 0.16
PDLIM7-209ENST00000503346 HSD17B8Q92506 261 aa16.06■□□□□ 0.16
PDLIM7-209ENST00000503346 SGTBQ96EQ0 304 aa16.06■□□□□ 0.16
PDLIM7-209ENST00000503346 POLDIP3Q9BY77 421 aaKnown RBP16.06■□□□□ 0.16
PDLIM7-209ENST00000503346 LINC00470Q9BZP3 86 aa16.06■□□□□ 0.16
PDLIM7-209ENST00000503346 MUC13Q9H3R2 512 aa16.06■□□□□ 0.16
PDLIM7-209ENST00000503346 ANKRD19PQ9H560 264 aa16.06■□□□□ 0.16
PDLIM7-209ENST00000503346 TAS2R5Q9NYW4 299 aa16.06■□□□□ 0.16
PDLIM7-209ENST00000503346 ACTR3BQ9P1U1 418 aa16.06■□□□□ 0.16
PDLIM7-209ENST00000503346 MPDZO75970 2070 aa16.06■□□□□ 0.16
PDLIM7-209ENST00000503346 ABCA12Q86UK0 2595 aa16.05■□□□□ 0.16
PDLIM7-209ENST00000503346 OR7A10O76100 309 aa16.05■□□□□ 0.16
PDLIM7-209ENST00000503346 OR6A2O95222 327 aa16.05■□□□□ 0.16
PDLIM7-209ENST00000503346 HIST1H2ABP04908 130 aa16.05■□□□□ 0.16
PDLIM7-209ENST00000503346 ADORA3P0DMS8 318 aa16.05■□□□□ 0.16
PDLIM7-209ENST00000503346 HLA-DOBP13765 273 aa16.05■□□□□ 0.16
PDLIM7-209ENST00000503346 RHCEP18577 417 aa16.05■□□□□ 0.16
PDLIM7-209ENST00000503346 FUT1P19526 365 aa16.05■□□□□ 0.16
PDLIM7-209ENST00000503346 MPGP29372 298 aa16.05■□□□□ 0.16
PDLIM7-209ENST00000503346 DNAJA1P31689 397 aaKnown RBP16.05■□□□□ 0.16
PDLIM7-209ENST00000503346 FOXG1P55316 489 aaPredicted RBP16.05■□□□□ 0.16
PDLIM7-209ENST00000503346 VLDLRP98155 873 aa16.05■□□□□ 0.16
PDLIM7-209ENST00000503346 POU3F1Q03052 451 aaPredicted RBP16.05■□□□□ 0.16
PDLIM7-209ENST00000503346 FOXD4Q12950 439 aaPredicted RBP16.05■□□□□ 0.16
PDLIM7-209ENST00000503346 TAB1Q15750 504 aa16.05■□□□□ 0.16
PDLIM7-209ENST00000503346 IQCCQ4KMZ1 466 aa16.05■□□□□ 0.16
PDLIM7-209ENST00000503346 TIMM23BQ5SRD1 257 aa16.05■□□□□ 0.16
PDLIM7-209ENST00000503346 HIST3H2AQ7L7L0 130 aa16.05■□□□□ 0.16
PDLIM7-209ENST00000503346 SSX8Q7RTT4 187 aa16.05■□□□□ 0.16
PDLIM7-209ENST00000503346 ABHD12BQ7Z5M8 362 aaPredicted RBP16.05■□□□□ 0.16
PDLIM7-209ENST00000503346 P2RY8Q86VZ1 359 aa16.05■□□□□ 0.16
PDLIM7-209ENST00000503346 CDC20BQ86Y33 519 aa16.05■□□□□ 0.16
PDLIM7-209ENST00000503346 C1orf162Q8NEQ5 155 aaPredicted RBP16.05■□□□□ 0.16
PDLIM7-209ENST00000503346 ACOT11Q8WXI4 607 aaPredicted RBP16.05■□□□□ 0.16
PDLIM7-209ENST00000503346 HIST1H2ACQ93077 130 aa16.05■□□□□ 0.16
PDLIM7-209ENST00000503346 MUS81Q96NY9 551 aa16.05■□□□□ 0.16
PDLIM7-209ENST00000503346 NMNAT1Q9HAN9 279 aaPredicted RBP16.05■□□□□ 0.16
PDLIM7-209ENST00000503346 FAM32AQ9Y421 112 aaKnown RBP16.05■□□□□ 0.16
PDLIM7-209ENST00000503346 A0A1W2PRQ8 180 aa16.04■□□□□ 0.16
PDLIM7-209ENST00000503346 CIB4A0PJX0 185 aa16.04■□□□□ 0.16
PDLIM7-209ENST00000503346 OR5H1A6NKK0 313 aa16.04■□□□□ 0.16
PDLIM7-209ENST00000503346 KLF4O43474 513 aa16.04■□□□□ 0.16
PDLIM7-209ENST00000503346 SLC43A1O75387 559 aa16.04■□□□□ 0.16
PDLIM7-209ENST00000503346 UPK3AO75631 287 aa16.04■□□□□ 0.16
PDLIM7-209ENST00000503346 UMPSP11172 480 aa16.04■□□□□ 0.16
PDLIM7-209ENST00000503346 AHCYP23526 432 aa16.04■□□□□ 0.16
PDLIM7-209ENST00000503346 LSM11P83369 360 aaKnown RBP eCLIP16.04■□□□□ 0.16
PDLIM7-209ENST00000503346 DGCR6Q14129 220 aa16.04■□□□□ 0.16
PDLIM7-209ENST00000503346 TRIM25Q14258 630 aaKnown RBP16.04■□□□□ 0.16
PDLIM7-209ENST00000503346 GABRA6Q16445 453 aa16.04■□□□□ 0.16
PDLIM7-209ENST00000503346 BEX5Q5H9J7 111 aa16.04■□□□□ 0.16
PDLIM7-209ENST00000503346 MTX3Q5HYI7 312 aa16.04■□□□□ 0.16
PDLIM7-209ENST00000503346 FBXW10Q5XX13 1052 aa16.04■□□□□ 0.16
PDLIM7-209ENST00000503346 OR7E24Q6IFN5 339 aa16.04■□□□□ 0.16
PDLIM7-209ENST00000503346 NANOGNBQ7Z5D8 188 aa16.04■□□□□ 0.16
PDLIM7-209ENST00000503346 WFDC8Q8IUA0 241 aa16.04■□□□□ 0.16
PDLIM7-209ENST00000503346 RNF113BQ8IZP6 322 aaKnown RBP16.04■□□□□ 0.16
PDLIM7-209ENST00000503346 TMEM123Q8N131 208 aa16.04■□□□□ 0.16
PDLIM7-209ENST00000503346 ANKK1Q8NFD2 765 aa16.04■□□□□ 0.16
PDLIM7-209ENST00000503346 BOD1Q96IK1 185 aa16.04■□□□□ 0.16
PDLIM7-209ENST00000503346 OR2M2Q96R28 347 aa16.04■□□□□ 0.16
PDLIM7-209ENST00000503346 V9GYQ6 96 aa16.04■□□□□ 0.16
PDLIM7-209ENST00000503346 FREM1Q5H8C1 2179 aa16.03■□□□□ 0.16
PDLIM7-209ENST00000503346 A0A087WUU8 490 aa16.03■□□□□ 0.16
PDLIM7-209ENST00000503346 ZNF587BE7ETH6 402 aa16.03■□□□□ 0.16
PDLIM7-209ENST00000503346 RPL36A-HNRNPH2H7BZ11 118 aa16.03■□□□□ 0.16
PDLIM7-209ENST00000503346 hCG_2039718K7EN88 272 aa16.03■□□□□ 0.16
PDLIM7-209ENST00000503346 PIP5K1CO60331 668 aa16.03■□□□□ 0.16
PDLIM7-209ENST00000503346 RAD51DO75771 328 aa16.03■□□□□ 0.16
PDLIM7-209ENST00000503346 KRT33AO76009 404 aa16.03■□□□□ 0.16
PDLIM7-209ENST00000503346 PDE5AO76074 875 aa16.03■□□□□ 0.16
PDLIM7-209ENST00000503346 H1F0P07305 194 aaKnown RBP16.03■□□□□ 0.16
PDLIM7-209ENST00000503346 TSPAN19P0C672 248 aa16.03■□□□□ 0.16
PDLIM7-209ENST00000503346 ITGA2P17301 1181 aa16.03■□□□□ 0.16
PDLIM7-209ENST00000503346 ATP6V1B2P21281 511 aa16.03■□□□□ 0.16
PDLIM7-209ENST00000503346 LOXP28300 417 aaPredicted RBP16.03■□□□□ 0.16
PDLIM7-209ENST00000503346 TGFBR3Q03167 851 aa16.03■□□□□ 0.16
PDLIM7-209ENST00000503346 LGALS3BPQ08380 585 aa16.03■□□□□ 0.16
PDLIM7-209ENST00000503346 DNAL1Q4LDG9 190 aa16.03■□□□□ 0.16
PDLIM7-209ENST00000503346 LCN8Q6JVE9 175 aa16.03■□□□□ 0.16
PDLIM7-209ENST00000503346 SEZ6L2Q6UXD5 910 aa16.03■□□□□ 0.16
PDLIM7-209ENST00000503346 MBOAT2Q6ZWT7 520 aa16.03■□□□□ 0.16
PDLIM7-209ENST00000503346 LINGO2Q7L985 606 aa16.03■□□□□ 0.16
PDLIM7-209ENST00000503346 NRMQ8IXM6 262 aa16.03■□□□□ 0.16
PDLIM7-209ENST00000503346 C17orf78Q8N4C9 275 aa16.03■□□□□ 0.16
PDLIM7-209ENST00000503346 BPIFA2Q96DR5 249 aa16.03■□□□□ 0.16
PDLIM7-209ENST00000503346 TXNDC15Q96J42 360 aa16.03■□□□□ 0.16
PDLIM7-209ENST00000503346 DHRS1Q96LJ7 313 aa16.03■□□□□ 0.16
PDLIM7-209ENST00000503346 ALKBH3Q96Q83 286 aaPredicted RBP16.03■□□□□ 0.16
PDLIM7-209ENST00000503346 PIP5K1AQ99755 562 aa16.03■□□□□ 0.16
PDLIM7-209ENST00000503346 MED29Q9NX70 200 aa16.03■□□□□ 0.16
PDLIM7-209ENST00000503346 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.02■□□□□ 0.16
PDLIM7-209ENST00000503346 A0A1W2PPR1 153 aa16.02■□□□□ 0.16
PDLIM7-209ENST00000503346 SLC35F4A4IF30 521 aa16.02■□□□□ 0.16
PDLIM7-209ENST00000503346 C11orf98E9PRG8 122 aa16.02■□□□□ 0.16
PDLIM7-209ENST00000503346 RNF13O43567 381 aa16.02■□□□□ 0.16
PDLIM7-209ENST00000503346 IFI30P13284 250 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms