RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 SPEF1Q9Y4P9 236 aa5.28□□□□□ -1.56
LSM3P4-201ENST00000502948 A0A087WUJ7 227 aa5.27□□□□□ -1.57
LSM3P4-201ENST00000502948 hCG_2039718K7EN88 272 aa5.27□□□□□ -1.57
LSM3P4-201ENST00000502948 KLF11O14901 512 aa5.27□□□□□ -1.57
LSM3P4-201ENST00000502948 RGS16O15492 202 aaPredicted RBP5.27□□□□□ -1.57
LSM3P4-201ENST00000502948 TRAF3IP2O43734 574 aaPredicted RBP5.27□□□□□ -1.57
LSM3P4-201ENST00000502948 ENTPD5O75356 428 aa5.27□□□□□ -1.57
LSM3P4-201ENST00000502948 SLC22A3O75751 556 aa5.27□□□□□ -1.57
LSM3P4-201ENST00000502948 LY6HO94772 140 aa5.27□□□□□ -1.57
LSM3P4-201ENST00000502948 TFP02787 698 aa5.27□□□□□ -1.57
LSM3P4-201ENST00000502948 GSNP06396 782 aa5.27□□□□□ -1.57
LSM3P4-201ENST00000502948 GKN3PP0CG01 181 aa5.27□□□□□ -1.57
LSM3P4-201ENST00000502948 ZNF14P17017 642 aaPredicted RBP5.27□□□□□ -1.57
LSM3P4-201ENST00000502948 HOXB9P17482 250 aaPredicted RBP5.27□□□□□ -1.57
LSM3P4-201ENST00000502948 CCNA2P20248 432 aa5.27□□□□□ -1.57
LSM3P4-201ENST00000502948 GTF2E2P29084 291 aaKnown RBP5.27□□□□□ -1.57
LSM3P4-201ENST00000502948 THBS4P35443 961 aa5.27□□□□□ -1.57
LSM3P4-201ENST00000502948 CDKN2CP42773 168 aa5.27□□□□□ -1.57
LSM3P4-201ENST00000502948 RPS23P62266 143 aaKnown RBP5.27□□□□□ -1.57
LSM3P4-201ENST00000502948 VSNL1P62760 191 aa5.27□□□□□ -1.57
LSM3P4-201ENST00000502948 BST1Q10588 318 aa5.27□□□□□ -1.57
LSM3P4-201ENST00000502948 RGNQ15493 299 aa5.27□□□□□ -1.57
LSM3P4-201ENST00000502948 FXNQ16595 210 aa5.27□□□□□ -1.57
LSM3P4-201ENST00000502948 IQCCQ4KMZ1 466 aa5.27□□□□□ -1.57
LSM3P4-201ENST00000502948 ZNF311Q5JNZ3 666 aa5.27□□□□□ -1.57
LSM3P4-201ENST00000502948 FAM209AQ5JX71 171 aa5.27□□□□□ -1.57
LSM3P4-201ENST00000502948 COX20Q5RI15 118 aa5.27□□□□□ -1.57
LSM3P4-201ENST00000502948 C9orf135Q5VTT2 229 aa5.27□□□□□ -1.57
LSM3P4-201ENST00000502948 ULK3Q6PHR2 472 aa5.27□□□□□ -1.57
LSM3P4-201ENST00000502948 H1FNTQ75WM6 255 aaPredicted RBP5.27□□□□□ -1.57
LSM3P4-201ENST00000502948 PXKQ7Z7A4 578 aa5.27□□□□□ -1.57
LSM3P4-201ENST00000502948 DPPA2Q7Z7J5 298 aa5.27□□□□□ -1.57
LSM3P4-201ENST00000502948 VRK2Q86Y07 508 aa5.27□□□□□ -1.57
LSM3P4-201ENST00000502948 C20orf196Q8IYI0 205 aa5.27□□□□□ -1.57
LSM3P4-201ENST00000502948 CLIP4Q8N3C7 705 aa5.27□□□□□ -1.57
LSM3P4-201ENST00000502948 GPR137CQ8N3F9 429 aa5.27□□□□□ -1.57
LSM3P4-201ENST00000502948 BBS10Q8TAM1 723 aa5.27□□□□□ -1.57
LSM3P4-201ENST00000502948 MRPL24Q96A35 216 aaKnown RBP5.27□□□□□ -1.57
LSM3P4-201ENST00000502948 ZMYND19Q96E35 227 aaPredicted RBP5.27□□□□□ -1.57
LSM3P4-201ENST00000502948 ITCHQ96J02 903 aa5.27□□□□□ -1.57
LSM3P4-201ENST00000502948 OR2M2Q96R28 347 aa5.27□□□□□ -1.57
LSM3P4-201ENST00000502948 EPYCQ99645 322 aa5.27□□□□□ -1.57
LSM3P4-201ENST00000502948 SOX7Q9BT81 388 aa5.27□□□□□ -1.57
LSM3P4-201ENST00000502948 CHODLQ9H9P2 273 aa5.27□□□□□ -1.57
LSM3P4-201ENST00000502948 CACYBPQ9HB71 228 aaKnown RBP5.27□□□□□ -1.57
LSM3P4-201ENST00000502948 NOX3Q9HBY0 568 aa5.27□□□□□ -1.57
LSM3P4-201ENST00000502948 GPR35Q9HC97 309 aa5.27□□□□□ -1.57
LSM3P4-201ENST00000502948 A4GALTQ9NPC4 353 aa5.27□□□□□ -1.57
LSM3P4-201ENST00000502948 TESQ9UGI8 421 aaKnown RBP5.27□□□□□ -1.57
LSM3P4-201ENST00000502948 CMAHPQ9Y471 501 aa5.27□□□□□ -1.57
LSM3P4-201ENST00000502948 DYSFO75923 2080 aa5.27□□□□□ -1.57
LSM3P4-201ENST00000502948 IGLV3-9A0A075B6K5 115 aa5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 TRAV36DV7A0A075B6V5 113 aa5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 SLC22A23A1A5C7 686 aa5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 CENPBD1B2RD01 187 aa5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 MS4A18H0YCH9 400 aa5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 M0R233 179 aa5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 NR5A2O00482 541 aa5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 FMO6PO60774 539 aa5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 UBL3O95164 117 aa5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 ANP32DO95626 131 aa5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 SNAP29O95721 258 aa5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 MT-ATP6P00846 226 aa5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 C1QCP02747 245 aa5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 BCHEP06276 602 aa5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 PRG2P13727 222 aa5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 ETFAP13804 333 aa5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 ANPEPP15144 967 aa5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 CDH2P19022 906 aaPredicted RBP5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 NCF2P19878 526 aaPredicted RBP5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 BGNP21810 368 aa5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 PPIBP23284 216 aaKnown RBP5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 APEX1P27695 318 aaKnown RBP5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 CRATP43155 626 aa5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 RPS5P46782 204 aaKnown RBP5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 ARFIP2P53365 341 aa5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 CLDN17P56750 224 aa5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 ARF1P84077 181 aaKnown RBP5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 BNIP2Q12982 314 aa5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 SNTB2Q13425 540 aaKnown RBP5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 DAG1Q14118 895 aa5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 MPP2Q14168 576 aa5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 ADRM1Q16186 407 aa5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 GSG1Q2KHT4 349 aa5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 CEACAM16Q2WEN9 425 aa5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 MS4A18Q3C1V0 323 aa5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 KRT71Q3SY84 523 aa5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 ALG10BQ5I7T1 473 aa5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 LRIF1Q5T3J3 769 aa5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 DHRS4L2Q6PKH6 230 aa5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 LINC00114Q6XXX2 140 aa5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 PIWIL3Q7Z3Z3 882 aaKnown RBP5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 SPATA21Q7Z572 469 aa5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 SERPINA11Q86U17 422 aa5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 GLCCI1Q86VQ1 547 aa5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 UEVLDQ8IX04 471 aa5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 C1orf174Q8IYL3 243 aa5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 CADM2Q8N3J6 435 aa5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 ANKS4BQ8N8V4 417 aa5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 SEMA6DQ8NFY4 1073 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms