RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 CHRNB3Q05901 458 aa22.2■■□□□ 1.14
LSM6-202ENST00000502781 SNTB1Q13884 538 aaKnown RBP22.2■■□□□ 1.14
LSM6-202ENST00000502781 FAM98BQ52LJ0 330 aaKnown RBP22.2■■□□□ 1.14
LSM6-202ENST00000502781 AAED1Q7RTV5 226 aa22.2■■□□□ 1.14
LSM6-202ENST00000502781 NOX1Q9Y5S8 564 aa22.2■■□□□ 1.14
LSM6-202ENST00000502781 ALPK2Q86TB3 2170 aa22.19■■□□□ 1.14
LSM6-202ENST00000502781 TCRBV3S1A0A5B6 114 aa22.19■■□□□ 1.14
LSM6-202ENST00000502781 C16orf97H3BN30 126 aa22.19■■□□□ 1.14
LSM6-202ENST00000502781 HNRNPRO43390 633 aaKnown RBP22.19■■□□□ 1.14
LSM6-202ENST00000502781 HIST1H2ABP04908 130 aa22.19■■□□□ 1.14
LSM6-202ENST00000502781 ADORA3P0DMS8 318 aa22.19■■□□□ 1.14
LSM6-202ENST00000502781 UMPSP11172 480 aa22.19■■□□□ 1.14
LSM6-202ENST00000502781 MAKP20794 623 aa22.19■■□□□ 1.14
LSM6-202ENST00000502781 P2RY6Q15077 328 aa22.19■■□□□ 1.14
LSM6-202ENST00000502781 SEC23BQ15437 767 aa22.19■■□□□ 1.14
LSM6-202ENST00000502781 FGD3Q5JSP0 725 aa22.19■■□□□ 1.14
LSM6-202ENST00000502781 ZNF787Q6DD87 383 aa22.19■■□□□ 1.14
LSM6-202ENST00000502781 HIST3H2AQ7L7L0 130 aa22.19■■□□□ 1.14
LSM6-202ENST00000502781 NANOGNBQ7Z5D8 188 aa22.19■■□□□ 1.14
LSM6-202ENST00000502781 UEVLDQ8IX04 471 aa22.19■■□□□ 1.14
LSM6-202ENST00000502781 CANT1Q8WVQ1 401 aa22.19■■□□□ 1.14
LSM6-202ENST00000502781 HIST1H2ACQ93077 130 aa22.19■■□□□ 1.14
LSM6-202ENST00000502781 GADD45GO95257 159 aa22.18■■□□□ 1.14
LSM6-202ENST00000502781 RAP2AP10114 183 aa22.18■■□□□ 1.14
LSM6-202ENST00000502781 HOXB6P17509 224 aaKnown RBP22.18■■□□□ 1.14
LSM6-202ENST00000502781 COX5AP20674 150 aa22.18■■□□□ 1.14
LSM6-202ENST00000502781 RRM2P31350 389 aa22.18■■□□□ 1.14
LSM6-202ENST00000502781 LIMS1P48059 325 aa22.18■■□□□ 1.14
LSM6-202ENST00000502781 HMGA2P52926 109 aa22.18■■□□□ 1.14
LSM6-202ENST00000502781 CLDN17P56750 224 aa22.18■■□□□ 1.14
LSM6-202ENST00000502781 SPIBQ01892 262 aa22.18■■□□□ 1.14
LSM6-202ENST00000502781 C1DQ13901 141 aaKnown RBP22.18■■□□□ 1.14
LSM6-202ENST00000502781 TSPO2Q5TGU0 170 aa22.18■■□□□ 1.14
LSM6-202ENST00000502781 TMPRSS11FQ6ZWK6 438 aa22.18■■□□□ 1.14
LSM6-202ENST00000502781 OR4K5Q8NGD3 323 aa22.18■■□□□ 1.14
LSM6-202ENST00000502781 OR52J3Q8NH60 311 aa22.18■■□□□ 1.14
LSM6-202ENST00000502781 OR10A4Q9H209 315 aa22.18■■□□□ 1.14
LSM6-202ENST00000502781 SLC7A10Q9NS82 523 aa22.18■■□□□ 1.14
LSM6-202ENST00000502781 KCNN3Q9UGI6 736 aa22.18■■□□□ 1.14
LSM6-202ENST00000502781 GPR52Q9Y2T5 361 aa22.18■■□□□ 1.14
LSM6-202ENST00000502781 DHRS12A0PJE2 317 aa22.17■■□□□ 1.14
LSM6-202ENST00000502781 SH3PXD2BA1X283 911 aa22.17■■□□□ 1.14
LSM6-202ENST00000502781 TUBAL3A6NHL2 446 aa22.17■■□□□ 1.14
LSM6-202ENST00000502781 PDLIM1O00151 329 aa22.17■■□□□ 1.14
LSM6-202ENST00000502781 KRT36O76013 467 aa22.17■■□□□ 1.14
LSM6-202ENST00000502781 ADAP00813 363 aa22.17■■□□□ 1.14
LSM6-202ENST00000502781 IGHV3-9P01782 118 aa22.17■■□□□ 1.14
LSM6-202ENST00000502781 AHCYP23526 432 aa22.17■■□□□ 1.14
LSM6-202ENST00000502781 KIR2DL3P43628 341 aa22.17■■□□□ 1.14
LSM6-202ENST00000502781 SELENOPP49908 381 aa22.17■■□□□ 1.14
LSM6-202ENST00000502781 RPS4XP62701 263 aaKnown RBP22.17■■□□□ 1.14
LSM6-202ENST00000502781 POU3F1Q03052 451 aaPredicted RBP22.17■■□□□ 1.14
LSM6-202ENST00000502781 ITGADQ13349 1161 aa22.17■■□□□ 1.14
LSM6-202ENST00000502781 FHL1Q13642 323 aa22.17■■□□□ 1.14
LSM6-202ENST00000502781 SFRP5Q5T4F7 317 aa22.17■■□□□ 1.14
LSM6-202ENST00000502781 RRM2BQ7LG56 351 aa22.17■■□□□ 1.14
LSM6-202ENST00000502781 CXorf67Q86X51 503 aaPredicted RBP22.17■■□□□ 1.14
LSM6-202ENST00000502781 ANKK1Q8NFD2 765 aa22.17■■□□□ 1.14
LSM6-202ENST00000502781 SLCO5A1Q9H2Y9 848 aa22.17■■□□□ 1.14
LSM6-202ENST00000502781 HIF3AQ9Y2N7 669 aa22.17■■□□□ 1.14
LSM6-202ENST00000502781 OR6C65A6NJZ3 312 aa22.16■■□□□ 1.14
LSM6-202ENST00000502781 BLOC1S5-TXNDC5H3BN57 136 aa22.16■■□□□ 1.14
LSM6-202ENST00000502781 OR6A2O95222 327 aa22.16■■□□□ 1.14
LSM6-202ENST00000502781 OMPP47874 163 aa22.16■■□□□ 1.14
LSM6-202ENST00000502781 RPL18Q07020 188 aaKnown RBP22.16■■□□□ 1.14
LSM6-202ENST00000502781 ANKDD1AQ495B1 522 aa22.16■■□□□ 1.14
LSM6-202ENST00000502781 NIPAL3Q6P499 406 aa22.16■■□□□ 1.14
LSM6-202ENST00000502781 ZNF295-AS1Q8N0V1 137 aa22.16■■□□□ 1.14
LSM6-202ENST00000502781 TMEM123Q8N131 208 aa22.16■■□□□ 1.14
LSM6-202ENST00000502781 POMGNT2Q8NAT1 580 aa22.16■■□□□ 1.14
LSM6-202ENST00000502781 LINC01560Q8TB33 94 aa22.16■■□□□ 1.14
LSM6-202ENST00000502781 UTP4Q969X6 686 aaKnown RBP22.16■■□□□ 1.14
LSM6-202ENST00000502781 HDHD5Q9BXW7 423 aa22.16■■□□□ 1.14
LSM6-202ENST00000502781 CRIM1Q9NZV1 1036 aa22.16■■□□□ 1.14
LSM6-202ENST00000502781 TMEM5Q9Y2B1 443 aa22.16■■□□□ 1.14
LSM6-202ENST00000502781 LYVE1Q9Y5Y7 322 aa22.16■■□□□ 1.14
LSM6-202ENST00000502781 C11orf98E9PRG8 122 aa22.15■■□□□ 1.14
LSM6-202ENST00000502781 CDC42EP2O14613 210 aa22.15■■□□□ 1.14
LSM6-202ENST00000502781 IGHV1-2P23083 117 aa22.15■■□□□ 1.14
LSM6-202ENST00000502781 SLC9A3P48764 834 aa22.15■■□□□ 1.14
LSM6-202ENST00000502781 IL1RL1Q01638 556 aa22.15■■□□□ 1.14
LSM6-202ENST00000502781 SPATA24Q86W54 205 aa22.15■■□□□ 1.14
LSM6-202ENST00000502781 MEX3DQ86XN8 651 aaKnown RBP22.15■■□□□ 1.14
LSM6-202ENST00000502781 CDK20Q8IZL9 346 aa22.15■■□□□ 1.14
LSM6-202ENST00000502781 UBE2J2Q8N2K1 259 aa22.15■■□□□ 1.14
LSM6-202ENST00000502781 FAM222BQ8WU58 562 aa22.15■■□□□ 1.14
LSM6-202ENST00000502781 MARVELD3Q96A59 401 aa22.15■■□□□ 1.14
LSM6-202ENST00000502781 TXNDC15Q96J42 360 aa22.15■■□□□ 1.14
LSM6-202ENST00000502781 DACH2Q96NX9 599 aa22.15■■□□□ 1.14
LSM6-202ENST00000502781 ALPK1Q96QP1 1244 aa22.15■■□□□ 1.14
LSM6-202ENST00000502781 OR2M2Q96R28 347 aa22.15■■□□□ 1.14
LSM6-202ENST00000502781 CHID1Q9BWS9 393 aa22.15■■□□□ 1.14
LSM6-202ENST00000502781 LINC00470Q9BZP3 86 aa22.15■■□□□ 1.14
LSM6-202ENST00000502781 ASB6Q9NWX5 421 aa22.15■■□□□ 1.14
LSM6-202ENST00000502781 MED29Q9NX70 200 aa22.15■■□□□ 1.14
LSM6-202ENST00000502781 NBPF19A0A087WUL8 3843 aa22.15■■□□□ 1.14
LSM6-202ENST00000502781 EFCAB9A8MZ26 197 aa22.14■■□□□ 1.14
LSM6-202ENST00000502781 KLF4O43474 513 aa22.14■■□□□ 1.14
LSM6-202ENST00000502781 RNF13O43567 381 aa22.14■■□□□ 1.14
LSM6-202ENST00000502781 AKAP8O43823 692 aaKnown RBP22.14■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms