RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 WBP4O75554 376 aaKnown RBP4.11□□□□□ -1.75
SSR3-209ENST00000498205 MYO1DO94832 1006 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 SEMA3DO95025 777 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 POP4O95707 220 aaKnown RBP4.11□□□□□ -1.75
SSR3-209ENST00000498205 OXSR1O95747 527 aaPredicted RBP4.11□□□□□ -1.75
SSR3-209ENST00000498205 FGF19O95750 216 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 LGI1O95970 557 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 SERPINA1P01009 418 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 FTH1P02794 183 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 ELK4P28324 431 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 HOXA9P31269 272 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 KRT20P35900 424 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 GGT2P36268 569 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 HPCAL1P37235 193 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 SLC11A1P49279 550 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 RAB28P51157 221 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 SP3Q02447 781 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 ZNF415Q09FC8 603 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 TWF1Q12792 350 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 CBX3Q13185 183 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 AQP6Q13520 282 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 RAPSNQ13702 412 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 NPTX1Q15818 432 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 ZNF630Q2M218 657 aaPredicted RBP4.11□□□□□ -1.75
SSR3-209ENST00000498205 ZNF404Q494X3 552 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 FUT11Q495W5 492 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 MPPE1Q53F39 396 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 PHLDA2Q53GA4 152 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 ATAD3BQ5T9A4 648 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 MEDAGQ5VYS4 303 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 CST9Q5W186 159 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 CST9LP1Q5W188 147 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 NOXRED1Q6NXP6 359 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 ZNF613Q6PF04 617 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 ENPP6Q6UWR7 440 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 TAS2R42Q7RTR8 314 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 NUP54Q7Z3B4 507 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 IQCHQ86VS3 1027 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 CYP4Z1Q86W10 505 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 RALGPS2Q86X27 583 aaPredicted RBP4.11□□□□□ -1.75
SSR3-209ENST00000498205 ZNF843Q8N446 348 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 TTC29Q8NA56 475 aaPredicted RBP4.11□□□□□ -1.75
SSR3-209ENST00000498205 BPIFB6Q8NFQ5 453 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 OR4K1Q8NGD4 311 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 FAM110BQ8TC76 370 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 ZNRF4Q8WWF5 429 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 SELENOMQ8WWX9 145 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 UBE2E3Q969T4 207 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 OTUB2Q96DC9 234 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 ZNF514Q96K75 400 aaPredicted RBP4.11□□□□□ -1.75
SSR3-209ENST00000498205 COL21A1Q96P44 957 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 EGFL8Q99944 293 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 MAPKAP1Q9BPZ7 522 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 DCUN1D5Q9BTE7 237 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 DOHHQ9BU89 302 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 ZSCAN5AQ9BUG6 496 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 EFCAB11Q9BUY7 163 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 ADNPQ9H2P0 1102 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 REEP1Q9H902 201 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 LIN28AQ9H9Z2 209 aaKnown RBP4.11□□□□□ -1.75
SSR3-209ENST00000498205 C3orf14Q9HBI5 128 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 MYNNQ9NPC7 610 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 ELOVL2Q9NXB9 296 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 SPASTQ9UBP0 616 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 EPHA6Q9UF33 1036 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 WARS2Q9UGM6 360 aaKnown RBP4.11□□□□□ -1.75
SSR3-209ENST00000498205 PSORS1C1Q9UIG5 152 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 PRG3Q9Y2Y8 225 aaPredicted RBP4.11□□□□□ -1.75
SSR3-209ENST00000498205 GMPPBQ9Y5P6 360 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 PEX16Q9Y5Y5 336 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 PLXNA2O75051 1894 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 OBSL1O75147 1896 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 PCM1Q15154 2024 aa4.11□□□□□ -1.75
SSR3-209ENST00000498205 NCF1BA6NI72 391 aaPredicted RBP4.1□□□□□ -1.75
SSR3-209ENST00000498205 METTL15A6NJ78 407 aa4.1□□□□□ -1.75
SSR3-209ENST00000498205 NCF1CA8MVU1 366 aaPredicted RBP4.1□□□□□ -1.75
SSR3-209ENST00000498205 LOC110117498-PIK3R3F6TDL0 507 aa4.1□□□□□ -1.75
SSR3-209ENST00000498205 SCAMP2O15127 329 aaKnown RBP4.1□□□□□ -1.75
SSR3-209ENST00000498205 AQP9O43315 295 aa4.1□□□□□ -1.75
SSR3-209ENST00000498205 UPK1BO75841 260 aa4.1□□□□□ -1.75
SSR3-209ENST00000498205 GJB5O95377 273 aa4.1□□□□□ -1.75
SSR3-209ENST00000498205 KRT75O95678 551 aa4.1□□□□□ -1.75
SSR3-209ENST00000498205 CLIC3O95833 236 aa4.1□□□□□ -1.75
SSR3-209ENST00000498205 PDYNP01213 254 aa4.1□□□□□ -1.75
SSR3-209ENST00000498205 CATP04040 527 aaKnown RBP4.1□□□□□ -1.75
SSR3-209ENST00000498205 RPLP0P05388 317 aaKnown RBP4.1□□□□□ -1.75
SSR3-209ENST00000498205 CDK1P06493 297 aa4.1□□□□□ -1.75
SSR3-209ENST00000498205 PIRTP0C851 137 aa4.1□□□□□ -1.75
SSR3-209ENST00000498205 ATP1B2P14415 290 aaPredicted RBP4.1□□□□□ -1.75
SSR3-209ENST00000498205 NELFEP18615 380 aaKnown RBP4.1□□□□□ -1.75
SSR3-209ENST00000498205 PTBP1P26599 531 aaKnown RBP eCLIP4.1□□□□□ -1.75
SSR3-209ENST00000498205 PTGER4P35408 488 aa4.1□□□□□ -1.75
SSR3-209ENST00000498205 HSD17B2P37059 387 aa4.1□□□□□ -1.75
SSR3-209ENST00000498205 TGFBR2P37173 567 aa4.1□□□□□ -1.75
SSR3-209ENST00000498205 OPRL1P41146 370 aa4.1□□□□□ -1.75
SSR3-209ENST00000498205 SPINT3P49223 89 aa4.1□□□□□ -1.75
SSR3-209ENST00000498205 DAPP51397 102 aa4.1□□□□□ -1.75
SSR3-209ENST00000498205 SMIM11AP58511 58 aa4.1□□□□□ -1.75
SSR3-209ENST00000498205 DEFA1P59665 94 aa4.1□□□□□ -1.75
SSR3-209ENST00000498205 DEFA3P59666 94 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms