RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 FGF13Q92913 245 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 NTAN1Q96AB6 310 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 MRPL53Q96EL3 112 aaKnown RBP2.1□□□□□ -2.07
RIF1-212ENST00000498041 SIGLEC12Q96PQ1 595 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 FAM111AQ96PZ2 611 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 HBEGFQ99075 208 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 ZNF670Q9BS34 389 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 WRAP53Q9BUR4 548 aaKnown RBP2.1□□□□□ -2.07
RIF1-212ENST00000498041 ZYG11BQ9C0D3 744 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 SLC5A7Q9GZV3 580 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 GBA3Q9H227 469 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 SPNS1Q9H2V7 528 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 PRO3102Q9H379 93 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 TCEAL2Q9H3H9 227 aaPredicted RBP2.1□□□□□ -2.07
RIF1-212ENST00000498041 WDR55Q9H6Y2 383 aaPredicted RBP2.1□□□□□ -2.07
RIF1-212ENST00000498041 DCLRE1BQ9H816 532 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 MRPL40Q9NQ50 206 aaKnown RBP2.1□□□□□ -2.07
RIF1-212ENST00000498041 HEBP1Q9NRV9 189 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 FARSBQ9NSD9 589 aaKnown RBP2.1□□□□□ -2.07
RIF1-212ENST00000498041 TREX1Q9NSU2 369 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 ZCCHC3Q9NUD5 404 aaKnown RBP2.1□□□□□ -2.07
RIF1-212ENST00000498041 C20orf96Q9NUD7 363 aaPredicted RBP2.1□□□□□ -2.07
RIF1-212ENST00000498041 IMPAD1Q9NX62 359 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 Q9UF83 564 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 SLC23A2Q9UGH3 650 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 SUN2Q9UH99 717 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 ZNF225Q9UK10 706 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 CELA1Q9UNI1 258 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 DIMT1Q9UNQ2 313 aaKnown RBP2.1□□□□□ -2.07
RIF1-212ENST00000498041 ERVW-1Q9UQF0 538 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 TIMM22Q9Y584 194 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 MTCH2Q9Y6C9 303 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 SF3B1O75533 1304 aaKnown RBP eCLIP2.1□□□□□ -2.07
RIF1-212ENST00000498041 USP9XQ93008 2570 aaPredicted RBP2.09□□□□□ -2.07
RIF1-212ENST00000498041 ZNF106Q9H2Y7 1883 aaKnown RBP2.09□□□□□ -2.07
RIF1-212ENST00000498041 UBR4Q5T4S7 5183 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 A0A0A6YYD4 124 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 EXOC1LA0A1B0GW35 172 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 GMNCA6NCL1 334 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 TRABD2BA6NFA1 517 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 NCF1BA6NI72 391 aaPredicted RBP2.09□□□□□ -2.07
RIF1-212ENST00000498041 NCF1CA8MVU1 366 aaPredicted RBP2.09□□□□□ -2.07
RIF1-212ENST00000498041 F5H5T6 163 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 UBXN8O00124 270 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 SLC28A1O00337 649 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 CHEK1O14757 476 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 CHADO15335 359 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 RGS16O15492 202 aaPredicted RBP2.09□□□□□ -2.07
RIF1-212ENST00000498041 HCRTR1O43613 425 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 AP2A1O95782 977 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 SOD1P00441 154 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 GIG44P09565 113 aaPredicted RBP2.09□□□□□ -2.07
RIF1-212ENST00000498041 NCF1P14598 390 aaPredicted RBP2.09□□□□□ -2.07
RIF1-212ENST00000498041 PGAM2P15259 253 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 TPSB2P20231 275 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 CCNCP24863 283 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 FASP25445 335 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 UCP1P25874 307 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 PBLDP30039 288 aaPredicted RBP2.09□□□□□ -2.07
RIF1-212ENST00000498041 GDI1P31150 447 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 MAT2AP31153 395 aaKnown RBP2.09□□□□□ -2.07
RIF1-212ENST00000498041 CCR1P32246 355 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 MAGEA6P43360 314 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 BDKRB1P46663 353 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 HCAR3P49019 387 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 CASP9P55211 416 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 KIAA1024LP59773 190 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 RPS4XP62701 263 aaKnown RBP2.09□□□□□ -2.07
RIF1-212ENST00000498041 HERV-K104P63124 156 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 SLC7A9P82251 487 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 NDPQ00604 133 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 PAX2Q02962 417 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 ACTN3Q08043 901 aaPredicted RBP2.09□□□□□ -2.07
RIF1-212ENST00000498041 DMTNQ08495 405 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 IFFO1Q0D2I5 559 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 BST1Q10588 318 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 IFT88Q13099 833 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 XRCC4Q13426 336 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 KLF5Q13887 457 aaPredicted RBP2.09□□□□□ -2.07
RIF1-212ENST00000498041 TFDP2Q14188 446 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 GRB7Q14451 532 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 PDK1Q15118 436 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 PON2Q15165 354 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 TPSAB1Q15661 275 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 CHI3L2Q15782 390 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 MICAQ29983 383 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 KRTAP13-3Q3SY46 172 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 C9orf64Q5T6V5 341 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 CLEC6AQ6EIG7 209 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 C6orf89Q6UWU4 347 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 B3GLCTQ6Y288 498 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 ASRGL1Q7L266 308 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 TAS2R42Q7RTR8 314 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 TMEM135Q86UB9 458 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 MMAAQ8IVH4 418 aaKnown RBP2.09□□□□□ -2.07
RIF1-212ENST00000498041 CPNE9Q8IYJ1 553 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 UMODL1-AS1Q8N2C9 162 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 C10orf111Q8N326 155 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 ATPAF2Q8N5M1 289 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 ATP6V0D2Q8N8Y2 350 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms