RNA–Protein interactions for RNA: ENST00000497311.5

SMC4-226, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-226ENST00000497311 VHLLQ6RSH7 139 aa14.91□□□□□ -0.02
SMC4-226ENST00000497311 H1FNTQ75WM6 255 aaPredicted RBP14.91□□□□□ -0.02
SMC4-226ENST00000497311 FUNDC1Q8IVP5 155 aa14.91□□□□□ -0.02
SMC4-226ENST00000497311 MSRB3Q8IXL7 192 aa14.91□□□□□ -0.02
SMC4-226ENST00000497311 GPR137CQ8N3F9 429 aa14.91□□□□□ -0.02
SMC4-226ENST00000497311 OR4F15Q8NGB8 312 aa14.91□□□□□ -0.02
SMC4-226ENST00000497311 ZNF417Q8TAU3 575 aa14.91□□□□□ -0.02
SMC4-226ENST00000497311 SPDL1Q96EA4 605 aa14.91□□□□□ -0.02
SMC4-226ENST00000497311 ZNF587Q96SQ5 575 aaPredicted RBP14.91□□□□□ -0.02
SMC4-226ENST00000497311 PIMREGQ9BSJ6 248 aa14.91□□□□□ -0.02
SMC4-226ENST00000497311 RSPO3Q9BXY4 272 aaPredicted RBP14.91□□□□□ -0.02
SMC4-226ENST00000497311 TRAV36DV7A0A075B6V5 113 aa14.9□□□□□ -0.02
SMC4-226ENST00000497311 AKAP8O43823 692 aaKnown RBP14.9□□□□□ -0.02
SMC4-226ENST00000497311 IGKV3-15P01624 115 aa14.9□□□□□ -0.02
SMC4-226ENST00000497311 IGLV1-44P01699 117 aa14.9□□□□□ -0.02
SMC4-226ENST00000497311 FAM157CP0CG43 387 aa14.9□□□□□ -0.02
SMC4-226ENST00000497311 IGHV4-31P0DP07 118 aa14.9□□□□□ -0.02
SMC4-226ENST00000497311 CBR1P16152 277 aa14.9□□□□□ -0.02
SMC4-226ENST00000497311 HTR2AP28223 471 aa14.9□□□□□ -0.02
SMC4-226ENST00000497311 IDH3AP50213 366 aa14.9□□□□□ -0.02
SMC4-226ENST00000497311 NCALDP61601 193 aa14.9□□□□□ -0.02
SMC4-226ENST00000497311 ADIPOQQ15848 244 aa14.9□□□□□ -0.02
SMC4-226ENST00000497311 PAGE3Q5JUK9 113 aa14.9□□□□□ -0.02
SMC4-226ENST00000497311 FAM91A1Q658Y4 838 aa14.9□□□□□ -0.02
SMC4-226ENST00000497311 ULK3Q6PHR2 472 aa14.9□□□□□ -0.02
SMC4-226ENST00000497311 PIK3C3Q8NEB9 887 aa14.9□□□□□ -0.02
SMC4-226ENST00000497311 RNF217Q8TC41 542 aa14.9□□□□□ -0.02
SMC4-226ENST00000497311 LRRC8CQ8TDW0 803 aa14.9□□□□□ -0.02
SMC4-226ENST00000497311 SLC47A1Q96FL8 570 aa14.9□□□□□ -0.02
SMC4-226ENST00000497311 EBF4Q9BQW3 602 aa14.9□□□□□ -0.02
SMC4-226ENST00000497311 CCDC28BQ9BUN5 200 aa14.9□□□□□ -0.02
SMC4-226ENST00000497311 BEX2Q9BXY8 128 aa14.9□□□□□ -0.02
SMC4-226ENST00000497311 CRLF2Q9HC73 371 aa14.9□□□□□ -0.02
SMC4-226ENST00000497311 GPR35Q9HC97 309 aa14.9□□□□□ -0.02
SMC4-226ENST00000497311 MYOZ1Q9NP98 299 aaPredicted RBP14.9□□□□□ -0.02
SMC4-226ENST00000497311 SELENONQ9NZV5 590 aa14.9□□□□□ -0.02
SMC4-226ENST00000497311 VAPAQ9P0L0 249 aa14.9□□□□□ -0.02
SMC4-226ENST00000497311 IGKV1D-42A0A075B6H8 117 aa14.89□□□□□ -0.03
SMC4-226ENST00000497311 LOC102725191A0A1B0GVB3 256 aa14.89□□□□□ -0.03
SMC4-226ENST00000497311 PRORSD1PA6NEY8 169 aa14.89□□□□□ -0.03
SMC4-226ENST00000497311 VSTM5A8MXK1 200 aa14.89□□□□□ -0.03
SMC4-226ENST00000497311 VWC2LB2RUY7 222 aa14.89□□□□□ -0.03
SMC4-226ENST00000497311 TPST1O60507 370 aa14.89□□□□□ -0.03
SMC4-226ENST00000497311 ZNF16P17020 682 aaPredicted RBP14.89□□□□□ -0.03
SMC4-226ENST00000497311 CBLP22681 906 aa14.89□□□□□ -0.03
SMC4-226ENST00000497311 CALCRP30988 508 aa14.89□□□□□ -0.03
SMC4-226ENST00000497311 GZMKP49863 264 aa14.89□□□□□ -0.03
SMC4-226ENST00000497311 SCARB2Q14108 478 aa14.89□□□□□ -0.03
SMC4-226ENST00000497311 GGTLC2Q14390 218 aa14.89□□□□□ -0.03
SMC4-226ENST00000497311 MFSD13AQ14CX5 517 aa14.89□□□□□ -0.03
SMC4-226ENST00000497311 EFNB3Q15768 340 aa14.89□□□□□ -0.03
SMC4-226ENST00000497311 CARTPTQ16568 116 aa14.89□□□□□ -0.03
SMC4-226ENST00000497311 CEACAM16Q2WEN9 425 aa14.89□□□□□ -0.03
SMC4-226ENST00000497311 GLIPR1L2Q4G1C9 344 aa14.89□□□□□ -0.03
SMC4-226ENST00000497311 COMTD1Q86VU5 262 aa14.89□□□□□ -0.03
SMC4-226ENST00000497311 UEVLDQ8IX04 471 aa14.89□□□□□ -0.03
SMC4-226ENST00000497311 C10orf111Q8N326 155 aa14.89□□□□□ -0.03
SMC4-226ENST00000497311 ADPRHL1Q8NDY3 354 aa14.89□□□□□ -0.03
SMC4-226ENST00000497311 NUP37Q8NFH4 326 aa14.89□□□□□ -0.03
SMC4-226ENST00000497311 ZNF607Q96SK3 696 aa14.89□□□□□ -0.03
SMC4-226ENST00000497311 REPIN1Q9BWE0 567 aaKnown RBP14.89□□□□□ -0.03
SMC4-226ENST00000497311 PRR14Q9BWN1 585 aa14.89□□□□□ -0.03
SMC4-226ENST00000497311 TMEM38AQ9H6F2 299 aa14.89□□□□□ -0.03
SMC4-226ENST00000497311 SEC61A2Q9H9S3 476 aa14.89□□□□□ -0.03
SMC4-226ENST00000497311 TMEM27Q9HBJ8 222 aa14.89□□□□□ -0.03
SMC4-226ENST00000497311 SLCO1B3Q9NPD5 702 aa14.89□□□□□ -0.03
SMC4-226ENST00000497311 INTS9Q9NV88 658 aaKnown RBP14.89□□□□□ -0.03
SMC4-226ENST00000497311 LPAR3Q9UBY5 353 aa14.89□□□□□ -0.03
SMC4-226ENST00000497311 TESQ9UGI8 421 aaKnown RBP14.89□□□□□ -0.03
SMC4-226ENST00000497311 FBXO9Q9UK97 447 aaPredicted RBP14.89□□□□□ -0.03
SMC4-226ENST00000497311 SLC13A4Q9UKG4 626 aa14.89□□□□□ -0.03
SMC4-226ENST00000497311 CORO2BQ9UQ03 480 aa14.89□□□□□ -0.03
SMC4-226ENST00000497311 GMEB1Q9Y692 573 aa14.89□□□□□ -0.03
SMC4-226ENST00000497311 LOC390937A0A1W2PQ73 354 aa14.88□□□□□ -0.03
SMC4-226ENST00000497311 EVPLLA8MZ36 301 aa14.88□□□□□ -0.03
SMC4-226ENST00000497311 LMX1BO60663 402 aa14.88□□□□□ -0.03
SMC4-226ENST00000497311 NQO1P15559 274 aaKnown RBP14.88□□□□□ -0.03
SMC4-226ENST00000497311 SLC6A2P23975 617 aa14.88□□□□□ -0.03
SMC4-226ENST00000497311 ARR3P36575 388 aa14.88□□□□□ -0.03
SMC4-226ENST00000497311 NR4A2P43354 598 aa14.88□□□□□ -0.03
SMC4-226ENST00000497311 CAPZA2P47755 286 aa14.88□□□□□ -0.03
SMC4-226ENST00000497311 PPOXP50336 477 aa14.88□□□□□ -0.03
SMC4-226ENST00000497311 IDH3GP51553 393 aaPredicted RBP14.88□□□□□ -0.03
SMC4-226ENST00000497311 RGS8P57771 180 aaPredicted RBP14.88□□□□□ -0.03
SMC4-226ENST00000497311 CCDC36Q8IYA8 594 aa14.88□□□□□ -0.03
SMC4-226ENST00000497311 TMEM123Q8N131 208 aa14.88□□□□□ -0.03
SMC4-226ENST00000497311 ANKS4BQ8N8V4 417 aa14.88□□□□□ -0.03
SMC4-226ENST00000497311 BHLHE22Q8NFJ8 381 aaPredicted RBP14.88□□□□□ -0.03
SMC4-226ENST00000497311 OR6S1Q8NH40 331 aa14.88□□□□□ -0.03
SMC4-226ENST00000497311 DYDC1Q8WWB3 177 aa14.88□□□□□ -0.03
SMC4-226ENST00000497311 TMEM158Q8WZ71 300 aa14.88□□□□□ -0.03
SMC4-226ENST00000497311 ZNF837Q96EG3 531 aaPredicted RBP14.88□□□□□ -0.03
SMC4-226ENST00000497311 FOXN4Q96NZ1 517 aa14.88□□□□□ -0.03
SMC4-226ENST00000497311 OR2M2Q96R28 347 aa14.88□□□□□ -0.03
SMC4-226ENST00000497311 EPYCQ99645 322 aa14.88□□□□□ -0.03
SMC4-226ENST00000497311 SHARPINQ9H0F6 387 aa14.88□□□□□ -0.03
SMC4-226ENST00000497311 RAB1BQ9H0U4 201 aa14.88□□□□□ -0.03
SMC4-226ENST00000497311 PLK3Q9H4B4 646 aa14.88□□□□□ -0.03
SMC4-226ENST00000497311 SLC52A3Q9NQ40 469 aa14.88□□□□□ -0.03
SMC4-226ENST00000497311 KLHL14Q9P2G3 628 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms