RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 TTKP33981 857 aa13.75□□□□□ -0.21
HDAC4-213ENST00000496347 CDKN1AP38936 164 aa13.75□□□□□ -0.21
HDAC4-213ENST00000496347 ARFIP2P53365 341 aa13.75□□□□□ -0.21
HDAC4-213ENST00000496347 UBE2NP61088 152 aaKnown RBP13.75□□□□□ -0.21
HDAC4-213ENST00000496347 ROR2Q01974 943 aaKnown RBP13.75□□□□□ -0.21
HDAC4-213ENST00000496347 LGALS3BPQ08380 585 aa13.75□□□□□ -0.21
HDAC4-213ENST00000496347 PUDPQ08623 228 aa13.75□□□□□ -0.21
HDAC4-213ENST00000496347 VEZF1Q14119 521 aa13.75□□□□□ -0.21
HDAC4-213ENST00000496347 DUSP7Q16829 419 aa13.75□□□□□ -0.21
HDAC4-213ENST00000496347 VMACQ2NL98 169 aa13.75□□□□□ -0.21
HDAC4-213ENST00000496347 C3orf36Q3SXR2 165 aa13.75□□□□□ -0.21
HDAC4-213ENST00000496347 ANKRD16Q6P6B7 361 aa13.75□□□□□ -0.21
HDAC4-213ENST00000496347 B3GLCTQ6Y288 498 aa13.75□□□□□ -0.21
HDAC4-213ENST00000496347 CCDC80Q76M96 950 aa13.75□□□□□ -0.21
HDAC4-213ENST00000496347 UEVLDQ8IX04 471 aa13.75□□□□□ -0.21
HDAC4-213ENST00000496347 PIK3C3Q8NEB9 887 aa13.75□□□□□ -0.21
HDAC4-213ENST00000496347 GPR32P1Q8NGA4 272 aa13.75□□□□□ -0.21
HDAC4-213ENST00000496347 RNF217Q8TC41 542 aa13.75□□□□□ -0.21
HDAC4-213ENST00000496347 TAMM41Q96BW9 452 aa13.75□□□□□ -0.21
HDAC4-213ENST00000496347 LRRC58Q96CX6 371 aa13.75□□□□□ -0.21
HDAC4-213ENST00000496347 HS6ST2Q96MM7 605 aa13.75□□□□□ -0.21
HDAC4-213ENST00000496347 MCHR1Q99705 422 aa13.75□□□□□ -0.21
HDAC4-213ENST00000496347 WFDC6Q9BQY6 131 aa13.75□□□□□ -0.21
HDAC4-213ENST00000496347 PRR14Q9BWN1 585 aa13.75□□□□□ -0.21
HDAC4-213ENST00000496347 MED4Q9NPJ6 270 aa13.75□□□□□ -0.21
HDAC4-213ENST00000496347 MRPL39Q9NYK5 338 aaKnown RBP13.75□□□□□ -0.21
HDAC4-213ENST00000496347 ABCA1O95477 2261 aa13.75□□□□□ -0.21
HDAC4-213ENST00000496347 ARFGEF3Q5TH69 2177 aa13.75□□□□□ -0.21
HDAC4-213ENST00000496347 E7EQL1 145 aa13.74□□□□□ -0.21
HDAC4-213ENST00000496347 M0QX08 132 aa13.74□□□□□ -0.21
HDAC4-213ENST00000496347 MRASO14807 208 aa13.74□□□□□ -0.21
HDAC4-213ENST00000496347 UPK3AO75631 287 aa13.74□□□□□ -0.21
HDAC4-213ENST00000496347 BGLAPP02818 100 aa13.74□□□□□ -0.21
HDAC4-213ENST00000496347 HOXB4P17483 251 aaPredicted RBP13.74□□□□□ -0.21
HDAC4-213ENST00000496347 CD247P20963 164 aa13.74□□□□□ -0.21
HDAC4-213ENST00000496347 GZMMP51124 257 aa13.74□□□□□ -0.21
HDAC4-213ENST00000496347 IL1RL1Q01638 556 aa13.74□□□□□ -0.21
HDAC4-213ENST00000496347 LTBQ06643 244 aa13.74□□□□□ -0.21
HDAC4-213ENST00000496347 NPTX1Q15818 432 aa13.74□□□□□ -0.21
HDAC4-213ENST00000496347 CLEC12BQ2HXU8 276 aa13.74□□□□□ -0.21
HDAC4-213ENST00000496347 MMEL1Q495T6 779 aa13.74□□□□□ -0.21
HDAC4-213ENST00000496347 REP15Q6BDI9 236 aa13.74□□□□□ -0.21
HDAC4-213ENST00000496347 C11orf71Q6IPW1 123 aa13.74□□□□□ -0.21
HDAC4-213ENST00000496347 NANOGP8Q6NSW7 305 aa13.74□□□□□ -0.21
HDAC4-213ENST00000496347 CGB2Q6NT52 195 aa13.74□□□□□ -0.21
HDAC4-213ENST00000496347 ERICH5Q6P6B1 374 aa13.74□□□□□ -0.21
HDAC4-213ENST00000496347 LINGO2Q7L985 606 aa13.74□□□□□ -0.21
HDAC4-213ENST00000496347 TMEM123Q8N131 208 aa13.74□□□□□ -0.21
HDAC4-213ENST00000496347 FBXL14Q8N1E6 418 aa13.74□□□□□ -0.21
HDAC4-213ENST00000496347 KDM8Q8N371 416 aa13.74□□□□□ -0.21
HDAC4-213ENST00000496347 MUC15Q8N387 334 aa13.74□□□□□ -0.21
HDAC4-213ENST00000496347 GPR137CQ8N3F9 429 aa13.74□□□□□ -0.21
HDAC4-213ENST00000496347 FAM169BQ8N8A8 192 aa13.74□□□□□ -0.21
HDAC4-213ENST00000496347 OR6T1Q8NGN1 323 aa13.74□□□□□ -0.21
HDAC4-213ENST00000496347 MPP4Q96JB8 637 aa13.74□□□□□ -0.21
HDAC4-213ENST00000496347 OR2M2Q96R28 347 aa13.74□□□□□ -0.21
HDAC4-213ENST00000496347 KATNB1Q9BVA0 655 aa13.74□□□□□ -0.21
HDAC4-213ENST00000496347 SLC19A3Q9BZV2 496 aa13.74□□□□□ -0.21
HDAC4-213ENST00000496347 NANOGQ9H9S0 305 aa13.74□□□□□ -0.21
HDAC4-213ENST00000496347 SAR1AQ9NR31 198 aa13.74□□□□□ -0.21
HDAC4-213ENST00000496347 CBLN4Q9NTU7 201 aa13.74□□□□□ -0.21
HDAC4-213ENST00000496347 NOX1Q9Y5S8 564 aa13.74□□□□□ -0.21
HDAC4-213ENST00000496347 CAPN7Q9Y6W3 813 aa13.74□□□□□ -0.21
HDAC4-213ENST00000496347 CR1P17927 2039 aa13.74□□□□□ -0.21
HDAC4-213ENST00000496347 TRAPPC13A5PLN9 417 aa13.73□□□□□ -0.21
HDAC4-213ENST00000496347 ATP6V1G2-DDX39BF2Z307 99 aa13.73□□□□□ -0.21
HDAC4-213ENST00000496347 IGHV4-39P01824 125 aa13.73□□□□□ -0.21
HDAC4-213ENST00000496347 HOXB1P14653 301 aaPredicted RBP13.73□□□□□ -0.21
HDAC4-213ENST00000496347 CRYBA2P53672 197 aa13.73□□□□□ -0.21
HDAC4-213ENST00000496347 POU3F1Q03052 451 aaPredicted RBP13.73□□□□□ -0.21
HDAC4-213ENST00000496347 KLF10Q13118 480 aa13.73□□□□□ -0.21
HDAC4-213ENST00000496347 ENTPD8Q5MY95 495 aa13.73□□□□□ -0.21
HDAC4-213ENST00000496347 CALHM3Q86XJ0 350 aa13.73□□□□□ -0.21
HDAC4-213ENST00000496347 PCYOX1LQ8NBM8 494 aa13.73□□□□□ -0.21
HDAC4-213ENST00000496347 SLC26A7Q8TE54 656 aa13.73□□□□□ -0.21
HDAC4-213ENST00000496347 ADAMTS16Q8TE57 1224 aa13.73□□□□□ -0.21
HDAC4-213ENST00000496347 BCL2L2Q92843 193 aaPredicted RBP13.73□□□□□ -0.21
HDAC4-213ENST00000496347 ADAD1Q96M93 576 aaKnown RBP13.73□□□□□ -0.21
HDAC4-213ENST00000496347 MOGAT1Q96PD6 335 aa13.73□□□□□ -0.21
HDAC4-213ENST00000496347 SLC38A2Q96QD8 506 aa13.73□□□□□ -0.21
HDAC4-213ENST00000496347 KCNS3Q9BQ31 491 aa13.73□□□□□ -0.21
HDAC4-213ENST00000496347 ZNF426Q9BUY5 554 aa13.73□□□□□ -0.21
HDAC4-213ENST00000496347 C1QTNF6Q9BXI9 259 aa13.73□□□□□ -0.21
HDAC4-213ENST00000496347 NELFAQ9H3P2 528 aa13.73□□□□□ -0.21
HDAC4-213ENST00000496347 CRNNQ9UBG3 495 aaPredicted RBP13.73□□□□□ -0.21
HDAC4-213ENST00000496347 CPSF4LA6NMK7 179 aaKnown RBP13.72□□□□□ -0.21
HDAC4-213ENST00000496347 H7C417 338 aa13.72□□□□□ -0.21
HDAC4-213ENST00000496347 SMAD7O15105 426 aaKnown RBP13.72□□□□□ -0.21
HDAC4-213ENST00000496347 HPRP00739 348 aa13.72□□□□□ -0.21
HDAC4-213ENST00000496347 IGLV1-44P01699 117 aa13.72□□□□□ -0.21
HDAC4-213ENST00000496347 BMP4P12644 408 aa13.72□□□□□ -0.21
HDAC4-213ENST00000496347 FABP6P51161 128 aa13.72□□□□□ -0.21
HDAC4-213ENST00000496347 GUCY1A3Q02108 690 aa13.72□□□□□ -0.21
HDAC4-213ENST00000496347 PMS2P3Q13401 168 aa13.72□□□□□ -0.21
HDAC4-213ENST00000496347 RABL3Q5HYI8 236 aa13.72□□□□□ -0.21
HDAC4-213ENST00000496347 LINC00114Q6XXX2 140 aa13.72□□□□□ -0.21
HDAC4-213ENST00000496347 DNM1P46Q6ZS02 220 aa13.72□□□□□ -0.21
HDAC4-213ENST00000496347 PXKQ7Z7A4 578 aa13.72□□□□□ -0.21
HDAC4-213ENST00000496347 SNX32Q86XE0 403 aa13.72□□□□□ -0.21
HDAC4-213ENST00000496347 CCDC36Q8IYA8 594 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms