RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, human

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-233	ENST00000495899	GABRA6	Q16445	453 aa		10.89	□□□□□ -0.67
MRPL55-233	ENST00000495899	MS4A18	Q3C1V0	323 aa		10.89	□□□□□ -0.67
MRPL55-233	ENST00000495899	DEF8	Q6ZN54	512 aa		10.89	□□□□□ -0.67
MRPL55-233	ENST00000495899	PXK	Q7Z7A4	578 aa		10.89	□□□□□ -0.67
MRPL55-233	ENST00000495899	LSR	Q86X29	649 aa	Predicted RBP	10.89	□□□□□ -0.67
MRPL55-233	ENST00000495899	WFDC8	Q8IUA0	241 aa		10.89	□□□□□ -0.67
MRPL55-233	ENST00000495899	PGAM4	Q8N0Y7	254 aa		10.89	□□□□□ -0.67
MRPL55-233	ENST00000495899	KDM8	Q8N371	416 aa		10.89	□□□□□ -0.67
MRPL55-233	ENST00000495899	C17orf78	Q8N4C9	275 aa		10.89	□□□□□ -0.67
MRPL55-233	ENST00000495899	FITM2	Q8N6M3	262 aa		10.89	□□□□□ -0.67
MRPL55-233	ENST00000495899	CCDC197	Q8NCU1	140 aa		10.89	□□□□□ -0.67
MRPL55-233	ENST00000495899	MOGAT1	Q96PD6	335 aa		10.89	□□□□□ -0.67
MRPL55-233	ENST00000495899	PRSS27	Q9BQR3	290 aa		10.89	□□□□□ -0.67
MRPL55-233	ENST00000495899	LINC00470	Q9BZP3	86 aa		10.89	□□□□□ -0.67
MRPL55-233	ENST00000495899	AMBRA1	Q9C0C7	1298 aa		10.89	□□□□□ -0.67
MRPL55-233	ENST00000495899	ESRP2	Q9H6T0	727 aa	Known RBP	10.89	□□□□□ -0.67
MRPL55-233	ENST00000495899	FKRP	Q9H9S5	495 aa		10.89	□□□□□ -0.67
MRPL55-233	ENST00000495899	ARL8B	Q9NVJ2	186 aa		10.89	□□□□□ -0.67
MRPL55-233	ENST00000495899	GMPR2	Q9P2T1	348 aa	Known RBP	10.89	□□□□□ -0.67
MRPL55-233	ENST00000495899	SEC14L4	Q9UDX3	406 aa		10.89	□□□□□ -0.67
MRPL55-233	ENST00000495899	ZNF229	Q9UJW7	825 aa		10.89	□□□□□ -0.67
MRPL55-233	ENST00000495899	RPS6KA6	Q9UK32	745 aa		10.89	□□□□□ -0.67
MRPL55-233	ENST00000495899	NOX1	Q9Y5S8	564 aa		10.89	□□□□□ -0.67
MRPL55-233	ENST00000495899	POLQ	O75417	2590 aa		10.88	□□□□□ -0.67
MRPL55-233	ENST00000495899	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	10.88	□□□□□ -0.67
MRPL55-233	ENST00000495899		A0A1W2PPR1	153 aa		10.88	□□□□□ -0.67
MRPL55-233	ENST00000495899	PLPP3	O14495	311 aa		10.88	□□□□□ -0.67
MRPL55-233	ENST00000495899	KRT33A	O76009	404 aa		10.88	□□□□□ -0.67
MRPL55-233	ENST00000495899	ZNF432	O94892	652 aa		10.88	□□□□□ -0.67
MRPL55-233	ENST00000495899	ZNF682	O95780	498 aa		10.88	□□□□□ -0.67
MRPL55-233	ENST00000495899	CH25H	O95992	272 aa		10.88	□□□□□ -0.67
MRPL55-233	ENST00000495899	SERPINA1	P01009	418 aa		10.88	□□□□□ -0.67
MRPL55-233	ENST00000495899	MT-ND1	P03886	318 aa		10.88	□□□□□ -0.67
MRPL55-233	ENST00000495899	RAF1	P04049	648 aa		10.88	□□□□□ -0.67
MRPL55-233	ENST00000495899	HIST1H2AB	P04908	130 aa		10.88	□□□□□ -0.67
MRPL55-233	ENST00000495899	IFNW1	P05000	195 aa		10.88	□□□□□ -0.67
MRPL55-233	ENST00000495899	ITGA5	P08648	1049 aa		10.88	□□□□□ -0.67
MRPL55-233	ENST00000495899	HSD17B1	P14061	328 aa		10.88	□□□□□ -0.67
MRPL55-233	ENST00000495899	CBL	P22681	906 aa		10.88	□□□□□ -0.67
MRPL55-233	ENST00000495899	PAX7	P23759	505 aa		10.88	□□□□□ -0.67
MRPL55-233	ENST00000495899	DNASE1	P24855	282 aa		10.88	□□□□□ -0.67
MRPL55-233	ENST00000495899	SELENOP	P49908	381 aa		10.88	□□□□□ -0.67
MRPL55-233	ENST00000495899	CLDN17	P56750	224 aa		10.88	□□□□□ -0.67
MRPL55-233	ENST00000495899	PUDP	Q08623	228 aa		10.88	□□□□□ -0.67
MRPL55-233	ENST00000495899	ST3GAL3	Q11203	375 aa		10.88	□□□□□ -0.67
MRPL55-233	ENST00000495899	ZP4	Q12836	540 aa		10.88	□□□□□ -0.67
MRPL55-233	ENST00000495899	PPA1	Q15181	289 aa		10.88	□□□□□ -0.67
MRPL55-233	ENST00000495899	ZNF74	Q16587	644 aa		10.88	□□□□□ -0.67
MRPL55-233	ENST00000495899	FXN	Q16595	210 aa		10.88	□□□□□ -0.67
MRPL55-233	ENST00000495899	IFI44L	Q53G44	452 aa		10.88	□□□□□ -0.67
MRPL55-233	ENST00000495899	SAMD4B	Q5PRF9	694 aa	Known RBP	10.88	□□□□□ -0.67
MRPL55-233	ENST00000495899	GLYAT	Q6IB77	296 aa		10.88	□□□□□ -0.67
MRPL55-233	ENST00000495899	NIPAL3	Q6P499	406 aa		10.88	□□□□□ -0.67
MRPL55-233	ENST00000495899	C16orf89	Q6UX73	402 aa		10.88	□□□□□ -0.67
MRPL55-233	ENST00000495899	PAMR1	Q6UXH9	720 aa		10.88	□□□□□ -0.67
MRPL55-233	ENST00000495899	NHLRC1	Q6VVB1	395 aa		10.88	□□□□□ -0.67
MRPL55-233	ENST00000495899	FKBP9P1	Q75LS8	142 aa		10.88	□□□□□ -0.67
MRPL55-233	ENST00000495899	HIST3H2A	Q7L7L0	130 aa		10.88	□□□□□ -0.67
MRPL55-233	ENST00000495899	UEVLD	Q8IX04	471 aa		10.88	□□□□□ -0.67
MRPL55-233	ENST00000495899	OR5J2	Q8NH18	312 aa		10.88	□□□□□ -0.67
MRPL55-233	ENST00000495899	GEMIN6	Q8WXD5	167 aa	Known RBP	10.88	□□□□□ -0.67
MRPL55-233	ENST00000495899	NRGN	Q92686	78 aa		10.88	□□□□□ -0.67
MRPL55-233	ENST00000495899	HIST1H2AC	Q93077	130 aa		10.88	□□□□□ -0.67
MRPL55-233	ENST00000495899	FAM162A	Q96A26	154 aa		10.88	□□□□□ -0.67
MRPL55-233	ENST00000495899	MBD6	Q96DN6	1003 aa		10.88	□□□□□ -0.67
MRPL55-233	ENST00000495899	PLPPR2	Q96GM1	343 aa		10.88	□□□□□ -0.67
MRPL55-233	ENST00000495899	PRRC1	Q96M27	445 aa		10.88	□□□□□ -0.67
MRPL55-233	ENST00000495899	CITED4	Q96RK1	184 aa		10.88	□□□□□ -0.67
MRPL55-233	ENST00000495899	TMEM204	Q9BSN7	226 aa		10.88	□□□□□ -0.67
MRPL55-233	ENST00000495899	LIME1	Q9H400	295 aa		10.88	□□□□□ -0.67
MRPL55-233	ENST00000495899	GORASP2	Q9H8Y8	452 aa		10.88	□□□□□ -0.67
MRPL55-233	ENST00000495899	NANS	Q9NR45	359 aa		10.88	□□□□□ -0.67
MRPL55-233	ENST00000495899	CSMD2	Q7Z408	3487 aa		10.88	□□□□□ -0.67
MRPL55-233	ENST00000495899	HRNR	Q86YZ3	2850 aa	Predicted RBP	10.88	□□□□□ -0.67
MRPL55-233	ENST00000495899	ZNF587B	E7ETH6	402 aa		10.87	□□□□□ -0.67
MRPL55-233	ENST00000495899	RPL36A-HNRNPH2	H7BZ11	118 aa		10.87	□□□□□ -0.67
MRPL55-233	ENST00000495899	TRAF3IP2	O43734	574 aa	Predicted RBP	10.87	□□□□□ -0.67
MRPL55-233	ENST00000495899	SLC43A1	O75387	559 aa		10.87	□□□□□ -0.67
MRPL55-233	ENST00000495899	RAD51D	O75771	328 aa		10.87	□□□□□ -0.67
MRPL55-233	ENST00000495899	OR6A2	O95222	327 aa		10.87	□□□□□ -0.67
MRPL55-233	ENST00000495899	HPR	P00739	348 aa		10.87	□□□□□ -0.67
MRPL55-233	ENST00000495899	ASAH2B	P0C7U1	165 aa		10.87	□□□□□ -0.67
MRPL55-233	ENST00000495899	IST1	P53990	364 aa		10.87	□□□□□ -0.67
MRPL55-233	ENST00000495899	IL1RL1	Q01638	556 aa		10.87	□□□□□ -0.67
MRPL55-233	ENST00000495899	KEAP1	Q14145	624 aa		10.87	□□□□□ -0.67
MRPL55-233	ENST00000495899	STK11	Q15831	433 aa		10.87	□□□□□ -0.67
MRPL55-233	ENST00000495899	NCMAP	Q5T1S8	102 aa		10.87	□□□□□ -0.67
MRPL55-233	ENST00000495899	SEZ6L2	Q6UXD5	910 aa		10.87	□□□□□ -0.67
MRPL55-233	ENST00000495899	VTCN1	Q7Z7D3	282 aa		10.87	□□□□□ -0.67
MRPL55-233	ENST00000495899	NKAIN4	Q8IVV8	208 aa		10.87	□□□□□ -0.67
MRPL55-233	ENST00000495899	PIK3C3	Q8NEB9	887 aa		10.87	□□□□□ -0.67
MRPL55-233	ENST00000495899	TMEM239	Q8WW34	195 aa		10.87	□□□□□ -0.67
MRPL55-233	ENST00000495899	LIPH	Q8WWY8	451 aa		10.87	□□□□□ -0.67
MRPL55-233	ENST00000495899	NSL1	Q96IY1	281 aa		10.87	□□□□□ -0.67
MRPL55-233	ENST00000495899	HSH2D	Q96JZ2	352 aa		10.87	□□□□□ -0.67
MRPL55-233	ENST00000495899	LRR1	Q96L50	414 aa		10.87	□□□□□ -0.67
MRPL55-233	ENST00000495899	CDRT15	Q96T59	188 aa		10.87	□□□□□ -0.67
MRPL55-233	ENST00000495899	MEPE	Q9NQ76	525 aa	Predicted RBP	10.87	□□□□□ -0.67
MRPL55-233	ENST00000495899	DCAF13	Q9NV06	445 aa	Known RBP	10.87	□□□□□ -0.67
MRPL55-233	ENST00000495899	TAS2R5	Q9NYW4	299 aa		10.87	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 32 ms