RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 FCER2P06734 321 aa11.87□□□□□ -0.51
PTPN7-217ENST00000495688 CCR4P51679 360 aa11.87□□□□□ -0.51
PTPN7-217ENST00000495688 TMEM69Q5SWH9 247 aa11.87□□□□□ -0.51
PTPN7-217ENST00000495688 C9orf50Q5SZB4 431 aa11.87□□□□□ -0.51
PTPN7-217ENST00000495688 ZNF684Q5T5D7 378 aa11.87□□□□□ -0.51
PTPN7-217ENST00000495688 LIPNQ5VXI9 398 aa11.87□□□□□ -0.51
PTPN7-217ENST00000495688 CBLN3Q6UW01 205 aa11.87□□□□□ -0.51
PTPN7-217ENST00000495688 SEZ6L2Q6UXD5 910 aa11.87□□□□□ -0.51
PTPN7-217ENST00000495688 STAC2Q6ZMT1 411 aa11.87□□□□□ -0.51
PTPN7-217ENST00000495688 PARGQ86W56 976 aa11.87□□□□□ -0.51
PTPN7-217ENST00000495688 SIX5Q8N196 739 aa11.87□□□□□ -0.51
PTPN7-217ENST00000495688 BCORP1Q8N888 145 aa11.87□□□□□ -0.51
PTPN7-217ENST00000495688 ZNF784Q8NCA9 323 aaPredicted RBP11.87□□□□□ -0.51
PTPN7-217ENST00000495688 OR10AC1Q8NH08 325 aa11.87□□□□□ -0.51
PTPN7-217ENST00000495688 OR8K3Q8NH51 312 aa11.87□□□□□ -0.51
PTPN7-217ENST00000495688 ELSPBP1Q96BH3 223 aa11.87□□□□□ -0.51
PTPN7-217ENST00000495688 PBX4Q9BYU1 374 aa11.87□□□□□ -0.51
PTPN7-217ENST00000495688 CLEC4MQ9H2X3 399 aaPredicted RBP11.87□□□□□ -0.51
PTPN7-217ENST00000495688 KLHL9Q9P2J3 617 aa11.87□□□□□ -0.51
PTPN7-217ENST00000495688 ING1Q9UK53 422 aaPredicted RBP11.87□□□□□ -0.51
PTPN7-217ENST00000495688 FOXJ3Q9UPW0 622 aa11.87□□□□□ -0.51
PTPN7-217ENST00000495688 NPTNQ9Y639 398 aa11.87□□□□□ -0.51
PTPN7-217ENST00000495688 H0YC42 278 aa11.87□□□□□ -0.51
PTPN7-217ENST00000495688 GPRIN2O60269 458 aa11.87□□□□□ -0.51
PTPN7-217ENST00000495688 KRT33AO76009 404 aa11.87□□□□□ -0.51
PTPN7-217ENST00000495688 OR7A10O76100 309 aa11.87□□□□□ -0.51
PTPN7-217ENST00000495688 GLCEO94923 617 aa11.87□□□□□ -0.51
PTPN7-217ENST00000495688 LCN1P31025 176 aa11.87□□□□□ -0.51
PTPN7-217ENST00000495688 NUDT1P36639 197 aa11.87□□□□□ -0.51
PTPN7-217ENST00000495688 P2RX1P51575 399 aa11.87□□□□□ -0.51
PTPN7-217ENST00000495688 TPMTP51580 245 aa11.87□□□□□ -0.51
PTPN7-217ENST00000495688 TSPAN5P62079 268 aa11.87□□□□□ -0.51
PTPN7-217ENST00000495688 RPS4XP62701 263 aaKnown RBP11.87□□□□□ -0.51
PTPN7-217ENST00000495688 KCNAB1Q14722 419 aa11.87□□□□□ -0.51
PTPN7-217ENST00000495688 GRK1Q15835 563 aa11.87□□□□□ -0.51
PTPN7-217ENST00000495688 TCTE1Q5JU00 501 aa11.87□□□□□ -0.51
PTPN7-217ENST00000495688 TMEM92Q6UXU6 159 aa11.87□□□□□ -0.51
PTPN7-217ENST00000495688 BAIAP2L2Q6UXY1 529 aa11.87□□□□□ -0.51
PTPN7-217ENST00000495688 C7orf61Q8IZ16 206 aa11.87□□□□□ -0.51
PTPN7-217ENST00000495688 OR51A4Q8NGJ6 313 aa11.87□□□□□ -0.51
PTPN7-217ENST00000495688 FCAMRQ8WWV6 532 aa11.87□□□□□ -0.51
PTPN7-217ENST00000495688 NKX3-1Q99801 234 aaPredicted RBP11.87□□□□□ -0.51
PTPN7-217ENST00000495688 NOX3Q9HBY0 568 aa11.87□□□□□ -0.51
PTPN7-217ENST00000495688 DIABLOQ9NR28 239 aa11.87□□□□□ -0.51
PTPN7-217ENST00000495688 RXFP3Q9NSD7 469 aa11.87□□□□□ -0.51
PTPN7-217ENST00000495688 FRRS1LQ9P0K9 344 aa11.87□□□□□ -0.51
PTPN7-217ENST00000495688 MRM2Q9UI43 246 aaKnown RBP11.87□□□□□ -0.51
PTPN7-217ENST00000495688 YBX2Q9Y2T7 364 aaKnown RBP11.87□□□□□ -0.51
PTPN7-217ENST00000495688 ZNF337Q9Y3M9 751 aa11.87□□□□□ -0.51
PTPN7-217ENST00000495688 CLDN16Q9Y5I7 305 aa11.87□□□□□ -0.51
PTPN7-217ENST00000495688 FKBP7Q9Y680 259 aa11.87□□□□□ -0.51
PTPN7-217ENST00000495688 ARPC3O15145 178 aa11.86□□□□□ -0.51
PTPN7-217ENST00000495688 ALDOBP05062 364 aa11.86□□□□□ -0.51
PTPN7-217ENST00000495688 AP2S1P53680 142 aaPredicted RBP11.86□□□□□ -0.51
PTPN7-217ENST00000495688 UBE2IP63279 158 aaKnown RBP11.86□□□□□ -0.51
PTPN7-217ENST00000495688 CD226Q15762 336 aa11.86□□□□□ -0.51
PTPN7-217ENST00000495688 COMMD7Q86VX2 200 aa11.86□□□□□ -0.51
PTPN7-217ENST00000495688 ARHGEF39Q8N4T4 335 aa11.86□□□□□ -0.51
PTPN7-217ENST00000495688 RPS4Y2Q8TD47 263 aa11.86□□□□□ -0.51
PTPN7-217ENST00000495688 RELTQ969Z4 430 aa11.86□□□□□ -0.51
PTPN7-217ENST00000495688 CLIP3Q96DZ5 547 aa11.86□□□□□ -0.51
PTPN7-217ENST00000495688 C1QTNF6Q9BXI9 259 aa11.86□□□□□ -0.51
PTPN7-217ENST00000495688 Q9N2J8 555 aa11.86□□□□□ -0.51
PTPN7-217ENST00000495688 PTTG3PQ9NZH4 202 aa11.86□□□□□ -0.51
PTPN7-217ENST00000495688 RNF215Q9Y6U7 377 aa11.86□□□□□ -0.51
PTPN7-217ENST00000495688 TRAV8-7A0A075B6U6 113 aa11.86□□□□□ -0.51
PTPN7-217ENST00000495688 EPOPA6NHQ4 379 aa11.86□□□□□ -0.51
PTPN7-217ENST00000495688 SHOXO15266 292 aa11.86□□□□□ -0.51
PTPN7-217ENST00000495688 UPK3AO75631 287 aa11.86□□□□□ -0.51
PTPN7-217ENST00000495688 MAS1P04201 325 aa11.86□□□□□ -0.51
PTPN7-217ENST00000495688 GPR3P46089 330 aa11.86□□□□□ -0.51
PTPN7-217ENST00000495688 FAM69AQ5T7M9 428 aa11.86□□□□□ -0.51
PTPN7-217ENST00000495688 SLC35F3Q8IY50 421 aa11.86□□□□□ -0.51
PTPN7-217ENST00000495688 LSM14AQ8ND56 463 aaKnown RBP11.86□□□□□ -0.51
PTPN7-217ENST00000495688 OR52B4Q8NGK2 314 aa11.86□□□□□ -0.51
PTPN7-217ENST00000495688 S100A16Q96FQ6 103 aaKnown RBP11.86□□□□□ -0.51
PTPN7-217ENST00000495688 LRFN5Q96NI6 719 aa11.86□□□□□ -0.51
PTPN7-217ENST00000495688 DHRS9Q9BPW9 319 aa11.86□□□□□ -0.51
PTPN7-217ENST00000495688 ULBP3Q9BZM4 244 aa11.86□□□□□ -0.51
PTPN7-217ENST00000495688 PLEKHA1Q9HB21 404 aa11.86□□□□□ -0.51
PTPN7-217ENST00000495688 NPDC1Q9NQX5 325 aaPredicted RBP11.86□□□□□ -0.51
PTPN7-217ENST00000495688 NANSQ9NR45 359 aa11.86□□□□□ -0.51
PTPN7-217ENST00000495688 PIPOXQ9P0Z9 390 aa11.86□□□□□ -0.51
PTPN7-217ENST00000495688 MGAT4CQ9UBM8 478 aa11.86□□□□□ -0.51
PTPN7-217ENST00000495688 ZNF69Q9UC07 566 aa11.86□□□□□ -0.51
PTPN7-217ENST00000495688 AUP1Q9Y679 476 aa11.86□□□□□ -0.51
PTPN7-217ENST00000495688 ANKRD20A5PA0PJZ0 165 aa11.85□□□□□ -0.51
PTPN7-217ENST00000495688 C17orf51A8MQB3 221 aa11.85□□□□□ -0.51
PTPN7-217ENST00000495688 M0R233 179 aa11.85□□□□□ -0.51
PTPN7-217ENST00000495688 TNFRSF10CO14798 259 aa11.85□□□□□ -0.51
PTPN7-217ENST00000495688 ZNF749O43361 778 aa11.85□□□□□ -0.51
PTPN7-217ENST00000495688 RGS11O94810 467 aa11.85□□□□□ -0.51
PTPN7-217ENST00000495688 TGM6O95932 706 aa11.85□□□□□ -0.51
PTPN7-217ENST00000495688 CD1AP06126 327 aa11.85□□□□□ -0.51
PTPN7-217ENST00000495688 NHLRC1Q6VVB1 395 aa11.85□□□□□ -0.51
PTPN7-217ENST00000495688 TMPRSS12Q86WS5 348 aa11.85□□□□□ -0.51
PTPN7-217ENST00000495688 SLC43A2Q8N370 569 aa11.85□□□□□ -0.51
PTPN7-217ENST00000495688 MSANTD3Q96H12 275 aa11.85□□□□□ -0.51
PTPN7-217ENST00000495688 ADAD1Q96M93 576 aaKnown RBP11.85□□□□□ -0.51
PTPN7-217ENST00000495688 TMEM106CQ9BVX2 250 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms