RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 ZNF556Q9HAH1 456 aa12.95□□□□□ -0.34
BRCA1-223ENST00000494123 TAS2R5Q9NYW4 299 aa12.95□□□□□ -0.34
BRCA1-223ENST00000494123 KIF17Q9P2E2 1029 aa12.95□□□□□ -0.34
BRCA1-223ENST00000494123 ZNF629Q9UEG4 869 aaPredicted RBP12.95□□□□□ -0.34
BRCA1-223ENST00000494123 ING1Q9UK53 422 aaPredicted RBP12.95□□□□□ -0.34
BRCA1-223ENST00000494123 HIF3AQ9Y2N7 669 aa12.95□□□□□ -0.34
BRCA1-223ENST00000494123 NOSIPQ9Y314 301 aaKnown RBP12.95□□□□□ -0.34
BRCA1-223ENST00000494123 NOX1Q9Y5S8 564 aa12.95□□□□□ -0.34
BRCA1-223ENST00000494123 FLVCR1Q9Y5Y0 555 aa12.95□□□□□ -0.34
BRCA1-223ENST00000494123 UBR5O95071 2799 aaPredicted RBP12.95□□□□□ -0.34
BRCA1-223ENST00000494123 KLF4O43474 513 aa12.95□□□□□ -0.34
BRCA1-223ENST00000494123 AKAP8O43823 692 aaKnown RBP12.95□□□□□ -0.34
BRCA1-223ENST00000494123 ZG16O60844 167 aa12.95□□□□□ -0.34
BRCA1-223ENST00000494123 IL18BPO95998 194 aa12.95□□□□□ -0.34
BRCA1-223ENST00000494123 HPRP00739 348 aa12.95□□□□□ -0.34
BRCA1-223ENST00000494123 UQCRC1P31930 480 aa12.95□□□□□ -0.34
BRCA1-223ENST00000494123 AQP2P41181 271 aa12.95□□□□□ -0.34
BRCA1-223ENST00000494123 PRPS1P60891 318 aa12.95□□□□□ -0.34
BRCA1-223ENST00000494123 ZP4Q12836 540 aa12.95□□□□□ -0.34
BRCA1-223ENST00000494123 TSPAN31Q12999 210 aa12.95□□□□□ -0.34
BRCA1-223ENST00000494123 ALG10Q5BKT4 473 aa12.95□□□□□ -0.34
BRCA1-223ENST00000494123 VWA1Q6PCB0 445 aa12.95□□□□□ -0.34
BRCA1-223ENST00000494123 PXKQ7Z7A4 578 aa12.95□□□□□ -0.34
BRCA1-223ENST00000494123 ZDHHC13Q8IUH4 622 aa12.95□□□□□ -0.34
BRCA1-223ENST00000494123 HS3ST5Q8IZT8 346 aa12.95□□□□□ -0.34
BRCA1-223ENST00000494123 SVOPLQ8N434 492 aa12.95□□□□□ -0.34
BRCA1-223ENST00000494123 ATG16L2Q8NAA4 619 aa12.95□□□□□ -0.34
BRCA1-223ENST00000494123 OR6K3Q8NGY3 331 aa12.95□□□□□ -0.34
BRCA1-223ENST00000494123 MOSPD2Q8NHP6 518 aa12.95□□□□□ -0.34
BRCA1-223ENST00000494123 FANK1Q8TC84 345 aa12.95□□□□□ -0.34
BRCA1-223ENST00000494123 FEVQ99581 238 aa12.95□□□□□ -0.34
BRCA1-223ENST00000494123 GPA33Q99795 319 aa12.95□□□□□ -0.34
BRCA1-223ENST00000494123 C12orf49Q9H741 205 aa12.95□□□□□ -0.34
BRCA1-223ENST00000494123 B3GAT1Q9P2W7 334 aa12.95□□□□□ -0.34
BRCA1-223ENST00000494123 PROCRQ9UNN8 238 aa12.95□□□□□ -0.34
BRCA1-223ENST00000494123 DIDO1Q9BTC0 2240 aaKnown RBP12.94□□□□□ -0.34
BRCA1-223ENST00000494123 LOC102725191A0A1B0GVB3 256 aa12.94□□□□□ -0.34
BRCA1-223ENST00000494123 MRPL33O75394 65 aaKnown RBP12.94□□□□□ -0.34
BRCA1-223ENST00000494123 TNFSF13O75888 250 aa12.94□□□□□ -0.34
BRCA1-223ENST00000494123 SMNDC1O75940 238 aaKnown RBP eCLIP12.94□□□□□ -0.34
BRCA1-223ENST00000494123 ADAP00813 363 aa12.94□□□□□ -0.34
BRCA1-223ENST00000494123 F13BP05160 661 aa12.94□□□□□ -0.34
BRCA1-223ENST00000494123 GSTM3P21266 225 aa12.94□□□□□ -0.34
BRCA1-223ENST00000494123 PRKACGP22612 351 aa12.94□□□□□ -0.34
BRCA1-223ENST00000494123 RPL4P36578 427 aaKnown RBP12.94□□□□□ -0.34
BRCA1-223ENST00000494123 KIR2DL2P43627 348 aaPredicted RBP12.94□□□□□ -0.34
BRCA1-223ENST00000494123 GSSP48637 474 aa12.94□□□□□ -0.34
BRCA1-223ENST00000494123 CLDN17P56750 224 aa12.94□□□□□ -0.34
BRCA1-223ENST00000494123 RPS4XP62701 263 aaKnown RBP12.94□□□□□ -0.34
BRCA1-223ENST00000494123 RCN1Q15293 331 aa12.94□□□□□ -0.34
BRCA1-223ENST00000494123 GUSBP1Q15486 140 aa12.94□□□□□ -0.34
BRCA1-223ENST00000494123 CASP12Q6UXS9 341 aa12.94□□□□□ -0.34
BRCA1-223ENST00000494123 CREB3L2Q70SY1 520 aa12.94□□□□□ -0.34
BRCA1-223ENST00000494123 MRGPRGQ86SM5 289 aa12.94□□□□□ -0.34
BRCA1-223ENST00000494123 STK32CQ86UX6 486 aa12.94□□□□□ -0.34
BRCA1-223ENST00000494123 PQLC1Q8N2U9 271 aa12.94□□□□□ -0.34
BRCA1-223ENST00000494123 CA5BP1Q8WTZ4 195 aa12.94□□□□□ -0.34
BRCA1-223ENST00000494123 DGCR6LQ9BY27 220 aa12.94□□□□□ -0.34
BRCA1-223ENST00000494123 FANCFQ9NPI8 374 aa12.94□□□□□ -0.34
BRCA1-223ENST00000494123 INIPQ9NRY2 104 aa12.94□□□□□ -0.34
BRCA1-223ENST00000494123 PARPBPQ9NWS1 579 aa12.94□□□□□ -0.34
BRCA1-223ENST00000494123 INTS1Q8N201 2190 aaKnown RBP12.93□□□□□ -0.34
BRCA1-223ENST00000494123 A0A1W2PRG6 482 aa12.93□□□□□ -0.34
BRCA1-223ENST00000494123 SAC3D1A6NKF1 404 aa12.93□□□□□ -0.34
BRCA1-223ENST00000494123 EEF1E1-BLOC1S5C9J1V9 151 aa12.93□□□□□ -0.34
BRCA1-223ENST00000494123 EEF1E1O43324 174 aaKnown RBP12.93□□□□□ -0.34
BRCA1-223ENST00000494123 NDUFB2O95178 105 aa12.93□□□□□ -0.34
BRCA1-223ENST00000494123 TSPAN19P0C672 248 aa12.93□□□□□ -0.34
BRCA1-223ENST00000494123 HLA-DOBP13765 273 aa12.93□□□□□ -0.34
BRCA1-223ENST00000494123 ANXA8P13928 327 aa12.93□□□□□ -0.34
BRCA1-223ENST00000494123 SMARCD3Q6STE5 483 aa12.93□□□□□ -0.34
BRCA1-223ENST00000494123 AAED1Q7RTV5 226 aa12.93□□□□□ -0.34
BRCA1-223ENST00000494123 NUFIP2Q7Z417 695 aaKnown RBP12.93□□□□□ -0.34
BRCA1-223ENST00000494123 EPHX4Q8IUS5 362 aa12.93□□□□□ -0.34
BRCA1-223ENST00000494123 ZNF100Q8IYN0 542 aa12.93□□□□□ -0.34
BRCA1-223ENST00000494123 ZNF808Q8N4W9 903 aaPredicted RBP12.93□□□□□ -0.34
BRCA1-223ENST00000494123 STARD4Q96DR4 205 aa12.93□□□□□ -0.34
BRCA1-223ENST00000494123 ZNF385AQ96PM9 386 aaKnown RBP12.93□□□□□ -0.34
BRCA1-223ENST00000494123 PIGMQ9H3S5 423 aa12.93□□□□□ -0.34
BRCA1-223ENST00000494123 MCCC2Q9HCC0 563 aa12.93□□□□□ -0.34
BRCA1-223ENST00000494123 OAZ3Q9UMX2 235 aa12.93□□□□□ -0.34
BRCA1-223ENST00000494123 SIGLEC7Q9Y286 467 aa12.93□□□□□ -0.34
BRCA1-223ENST00000494123 MAGED1Q9Y5V3 778 aaPredicted RBP12.93□□□□□ -0.34
BRCA1-223ENST00000494123 NCOA6Q14686 2063 aaPredicted RBP12.93□□□□□ -0.34
BRCA1-223ENST00000494123 PCNX1Q96RV3 2341 aa12.93□□□□□ -0.34
BRCA1-223ENST00000494123 MCIDASD6RGH6 385 aa12.92□□□□□ -0.34
BRCA1-223ENST00000494123 TRAF3IP2O43734 574 aaPredicted RBP12.92□□□□□ -0.34
BRCA1-223ENST00000494123 PTP4A3O75365 173 aa12.92□□□□□ -0.34
BRCA1-223ENST00000494123 IFNGR1P15260 489 aa12.92□□□□□ -0.34
BRCA1-223ENST00000494123 RPL13AP3Q6NVV1 102 aa12.92□□□□□ -0.34
BRCA1-223ENST00000494123 NIPAL3Q6P499 406 aa12.92□□□□□ -0.34
BRCA1-223ENST00000494123 XKRXQ6PP77 449 aa12.92□□□□□ -0.34
BRCA1-223ENST00000494123 SLC35D2Q76EJ3 337 aa12.92□□□□□ -0.34
BRCA1-223ENST00000494123 BTLAQ7Z6A9 289 aa12.92□□□□□ -0.34
BRCA1-223ENST00000494123 IGFN1Q86VF2 1251 aa12.92□□□□□ -0.34
BRCA1-223ENST00000494123 LIX1LQ8IVB5 337 aa12.92□□□□□ -0.34
BRCA1-223ENST00000494123 FAM26EQ8N5C1 309 aa12.92□□□□□ -0.34
BRCA1-223ENST00000494123 TMEM45BQ96B21 275 aa12.92□□□□□ -0.34
BRCA1-223ENST00000494123 APH1AQ96BI3 265 aa12.92□□□□□ -0.34
BRCA1-223ENST00000494123 NIPSNAP1Q9BPW8 284 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms