RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 STARD10Q9Y365 291 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 Q9Y3F1 56 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 LAMA5O15230 3695 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 PNMA8CA0A1B0GUJ8 204 aa2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 ZSCAN5BA6NJL1 495 aa2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 H0YIN7 160 aa2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 IFNL4K9M1U5 179 aa2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 L7N2F9 121 aa2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 ARHGEF9O43307 516 aa2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 EMC8O43402 210 aa2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 SULT1B1O43704 296 aa2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 PRAF2O60831 178 aa2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 CTNSO60931 367 aa2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 CLDN11O75508 207 aa2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 CCNKO75909 580 aa2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 SFTPBP07988 381 aa2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 PRPS2P11908 318 aa2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 BCKDHAP12694 445 aa2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 FOLR1P15328 257 aa2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 ZNF8P17098 575 aaPredicted RBP2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 BRCC3P46736 316 aa2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 CAPZA2P47755 286 aa2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 TPMTP51580 245 aa2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 ATP12AP54707 1039 aa2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 GEMP55040 296 aa2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 FOXG1P55316 489 aaPredicted RBP2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 COG7P83436 770 aa2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 OC90Q02509 493 aaPredicted RBP2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 PTGES3Q15185 160 aaKnown RBP2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 ANGPT1Q15389 498 aa2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 RGNQ15493 299 aa2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 NEDD8Q15843 81 aa2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 ZIC1Q15915 447 aa2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 MAPKAPK3Q16644 382 aa2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 EIF2S3LQ2VIR3 472 aaKnown RBP2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 NCEH1Q6PIU2 408 aa2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 BTNL8Q6UX41 500 aa2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 WASH2PQ6VEQ5 465 aa2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 FRRS1Q6ZNA5 592 aa2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 CHST9Q7L1S5 443 aa2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 SYT13Q7L8C5 426 aa2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 TRMT1LQ7Z2T5 733 aaKnown RBP2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 SZRD1Q7Z422 152 aa2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 TAC4Q86UU9 113 aa2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 GKN2Q86XP6 184 aa2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 TMEM86AQ8N2M4 240 aa2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 KCNRGQ8N5I3 272 aa2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 SDR9C7Q8NEX9 313 aa2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 OR52B6Q8NGF0 335 aa2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 OR4A15Q8NGL6 344 aa2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 MBD3L2Q8NHZ7 208 aaPredicted RBP2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 SLC2A12Q8TD20 617 aa2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 GNPDA2Q8TDQ7 276 aa2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 PIH1D2Q8WWB5 315 aa2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 PIGKQ92643 395 aa2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 MYDGFQ969H8 173 aa2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 PTX4Q96A99 478 aa2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 CCDC124Q96CT7 223 aaKnown RBP2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 TUBGCP3Q96CW5 907 aa2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 CAPNS2Q96L46 248 aa2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 Q96MT0 163 aa2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 PYGO2Q9BRQ0 406 aa2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 THUMPD3Q9BV44 507 aaKnown RBP2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 FICDQ9BVA6 458 aa2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 KRTAP1-5Q9BYS1 174 aa2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 TKTL2Q9H0I9 626 aa2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 EPHX3Q9H6B9 360 aa2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 AAMDCQ9H7C9 122 aa2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 VAT1LQ9HCJ6 419 aa2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 TXNRD2Q9NNW7 524 aa2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 ZNF302Q9NR11 478 aa2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 SLC17A5Q9NRA2 495 aa2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 CA10Q9NS85 328 aa2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 SDHAF2Q9NX18 166 aa2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 THUMPD1Q9NXG2 353 aaKnown RBP2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 AKAP7Q9P0M2 348 aaPredicted RBP2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 CES1P1Q9UKY3 287 aa2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 TNFSF18Q9UNG2 199 aa2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 COPS3Q9UNS2 423 aa2.28□□□□□ -2.05
CDC42EP3-205ENST00000494083 DOCK7Q96N67 2140 aa2.27□□□□□ -2.05
CDC42EP3-205ENST00000494083 DCHS1Q96JQ0 3298 aa2.27□□□□□ -2.05
CDC42EP3-205ENST00000494083 A0A0U1RQK1 487 aa2.27□□□□□ -2.05
CDC42EP3-205ENST00000494083 LINC00854A0A1B0GVQ3 168 aa2.27□□□□□ -2.05
CDC42EP3-205ENST00000494083 ZNF320A2RRD8 509 aa2.27□□□□□ -2.05
CDC42EP3-205ENST00000494083 ANKDD1BA6NHY2 528 aa2.27□□□□□ -2.05
CDC42EP3-205ENST00000494083 ZNF729A6NN14 1252 aaPredicted RBP2.27□□□□□ -2.05
CDC42EP3-205ENST00000494083 ATP6V1G2-DDX39BF2Z307 99 aa2.27□□□□□ -2.05
CDC42EP3-205ENST00000494083 J3KR12 359 aa2.27□□□□□ -2.05
CDC42EP3-205ENST00000494083 SLC28A1O00337 649 aa2.27□□□□□ -2.05
CDC42EP3-205ENST00000494083 LYRM1O43325 122 aa2.27□□□□□ -2.05
CDC42EP3-205ENST00000494083 FGF1P05230 155 aa2.27□□□□□ -2.05
CDC42EP3-205ENST00000494083 EIF4EP06730 217 aaKnown RBP2.27□□□□□ -2.05
CDC42EP3-205ENST00000494083 GP1BAP07359 652 aa2.27□□□□□ -2.05
CDC42EP3-205ENST00000494083 CD14P08571 375 aa2.27□□□□□ -2.05
CDC42EP3-205ENST00000494083 F7P08709 466 aaPredicted RBP2.27□□□□□ -2.05
CDC42EP3-205ENST00000494083 OR8U8P0C7N1 319 aa2.27□□□□□ -2.05
CDC42EP3-205ENST00000494083 ESDP10768 282 aa2.27□□□□□ -2.05
CDC42EP3-205ENST00000494083 LMO2P25791 158 aa2.27□□□□□ -2.05
CDC42EP3-205ENST00000494083 PDHA2P29803 388 aa2.27□□□□□ -2.05
CDC42EP3-205ENST00000494083 EIF2S3P41091 472 aaKnown RBP2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms