RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 SLC38A1Q9H2H9 487 aa12.17□□□□□ -0.46
PRPF40A-211ENST00000493468 DENND2DQ9H6A0 471 aaPredicted RBP12.17□□□□□ -0.46
PRPF40A-211ENST00000493468 C7orf69Q9H7B7 122 aa12.17□□□□□ -0.46
PRPF40A-211ENST00000493468 MYEF2Q9P2K5 600 aaKnown RBP12.17□□□□□ -0.46
PRPF40A-211ENST00000493468 PYCARDQ9ULZ3 195 aa12.17□□□□□ -0.46
PRPF40A-211ENST00000493468 ARHGAP32A7KAX9 2087 aa12.17□□□□□ -0.46
PRPF40A-211ENST00000493468 DNAJC9-AS1A6NH13 148 aa12.16□□□□□ -0.46
PRPF40A-211ENST00000493468 FTCDNL1E5RQL4 147 aa12.16□□□□□ -0.46
PRPF40A-211ENST00000493468 TRIM13O60858 407 aa12.16□□□□□ -0.46
PRPF40A-211ENST00000493468 CHRNGP07510 517 aa12.16□□□□□ -0.46
PRPF40A-211ENST00000493468 RNASE1P07998 156 aaKnown RBP12.16□□□□□ -0.46
PRPF40A-211ENST00000493468 ZNF43P17038 809 aa12.16□□□□□ -0.46
PRPF40A-211ENST00000493468 GCH1P30793 250 aa12.16□□□□□ -0.46
PRPF40A-211ENST00000493468 CAPZA2P47755 286 aa12.16□□□□□ -0.46
PRPF40A-211ENST00000493468 PCLAFQ15004 111 aa12.16□□□□□ -0.46
PRPF40A-211ENST00000493468 PGS1Q32NB8 556 aa12.16□□□□□ -0.46
PRPF40A-211ENST00000493468 PCGF3Q3KNV8 242 aa12.16□□□□□ -0.46
PRPF40A-211ENST00000493468 MRPL2Q5T653 305 aaKnown RBP12.16□□□□□ -0.46
PRPF40A-211ENST00000493468 OR4F3Q6IEY1 312 aa12.16□□□□□ -0.46
PRPF40A-211ENST00000493468 ZNF627Q7L945 461 aa12.16□□□□□ -0.46
PRPF40A-211ENST00000493468 LRP11Q86VZ4 500 aa12.16□□□□□ -0.46
PRPF40A-211ENST00000493468 GSPT2Q8IYD1 628 aaKnown RBP12.16□□□□□ -0.46
PRPF40A-211ENST00000493468 SIGLECL1Q8N7X8 197 aa12.16□□□□□ -0.46
PRPF40A-211ENST00000493468 PIK3C3Q8NEB9 887 aa12.16□□□□□ -0.46
PRPF40A-211ENST00000493468 MFSD8Q8NHS3 518 aa12.16□□□□□ -0.46
PRPF40A-211ENST00000493468 STK35Q8TDR2 534 aa12.16□□□□□ -0.46
PRPF40A-211ENST00000493468 ZNF837Q96EG3 531 aaPredicted RBP12.16□□□□□ -0.46
PRPF40A-211ENST00000493468 MS4A3Q96HJ5 214 aa12.16□□□□□ -0.46
PRPF40A-211ENST00000493468 GPA33Q99795 319 aa12.16□□□□□ -0.46
PRPF40A-211ENST00000493468 ASIC5Q9NY37 505 aa12.16□□□□□ -0.46
PRPF40A-211ENST00000493468 NKIRAS2Q9NYR9 191 aa12.16□□□□□ -0.46
PRPF40A-211ENST00000493468 TBK1Q9UHD2 729 aa12.16□□□□□ -0.46
PRPF40A-211ENST00000493468 FBXL3Q9UKT7 428 aa12.16□□□□□ -0.46
PRPF40A-211ENST00000493468 PPIAL4EA0A075B759 164 aa12.15□□□□□ -0.46
PRPF40A-211ENST00000493468 PPIAL4CA0A0B4J2A2 164 aa12.15□□□□□ -0.46
PRPF40A-211ENST00000493468 A0A1W2PPW3 197 aa12.15□□□□□ -0.46
PRPF40A-211ENST00000493468 PPIAL4DF5H284 164 aa12.15□□□□□ -0.46
PRPF40A-211ENST00000493468 CLDN34H7C241 214 aa12.15□□□□□ -0.46
PRPF40A-211ENST00000493468 HMGN4O00479 90 aa12.15□□□□□ -0.46
PRPF40A-211ENST00000493468 AKAP8O43823 692 aaKnown RBP12.15□□□□□ -0.46
PRPF40A-211ENST00000493468 NPHS1O60500 1241 aa12.15□□□□□ -0.46
PRPF40A-211ENST00000493468 HLA-HP01893 362 aa12.15□□□□□ -0.46
PRPF40A-211ENST00000493468 DBIP07108 87 aaKnown RBP12.15□□□□□ -0.46
PRPF40A-211ENST00000493468 PPIAL4FP0DN26 164 aa12.15□□□□□ -0.46
PRPF40A-211ENST00000493468 PNMTP11086 282 aa12.15□□□□□ -0.46
PRPF40A-211ENST00000493468 NAT2P11245 290 aa12.15□□□□□ -0.46
PRPF40A-211ENST00000493468 G6PDP11413 515 aa12.15□□□□□ -0.46
PRPF40A-211ENST00000493468 ZFP36P26651 326 aaKnown RBP12.15□□□□□ -0.46
PRPF40A-211ENST00000493468 CRYBB2P43320 205 aa12.15□□□□□ -0.46
PRPF40A-211ENST00000493468 TXNL4AP83876 142 aaKnown RBP12.15□□□□□ -0.46
PRPF40A-211ENST00000493468 GALK2Q01415 458 aa12.15□□□□□ -0.46
PRPF40A-211ENST00000493468 TEKQ02763 1124 aa12.15□□□□□ -0.46
PRPF40A-211ENST00000493468 BNIP2Q12982 314 aa12.15□□□□□ -0.46
PRPF40A-211ENST00000493468 MAD2L1Q13257 205 aaPredicted RBP12.15□□□□□ -0.46
PRPF40A-211ENST00000493468 GKAP1Q5VSY0 366 aaPredicted RBP12.15□□□□□ -0.46
PRPF40A-211ENST00000493468 WBP2NLQ6ICG8 309 aa12.15□□□□□ -0.46
PRPF40A-211ENST00000493468 LRRC74BQ6ZQY2 392 aa12.15□□□□□ -0.46
PRPF40A-211ENST00000493468 TMEM123Q8N131 208 aa12.15□□□□□ -0.46
PRPF40A-211ENST00000493468 C22orf15Q8WYQ4 148 aa12.15□□□□□ -0.46
PRPF40A-211ENST00000493468 POP5Q969H6 163 aaKnown RBP12.15□□□□□ -0.46
PRPF40A-211ENST00000493468 C3orf30Q96M34 536 aa12.15□□□□□ -0.46
PRPF40A-211ENST00000493468 C1orf147Q96MC9 270 aaPredicted RBP12.15□□□□□ -0.46
PRPF40A-211ENST00000493468 MTHFD2LQ9H903 347 aaPredicted RBP12.15□□□□□ -0.46
PRPF40A-211ENST00000493468 B3GAT1Q9P2W7 334 aa12.15□□□□□ -0.46
PRPF40A-211ENST00000493468 SLC7A8Q9UHI5 535 aa12.15□□□□□ -0.46
PRPF40A-211ENST00000493468 GPR160Q9UJ42 338 aa12.15□□□□□ -0.46
PRPF40A-211ENST00000493468 CDHR4A6H8M9 788 aa12.14□□□□□ -0.47
PRPF40A-211ENST00000493468 C17orf100A8MU93 164 aa12.14□□□□□ -0.47
PRPF40A-211ENST00000493468 AHSA1O95433 338 aa12.14□□□□□ -0.47
PRPF40A-211ENST00000493468 NUDT17P0C025 328 aa12.14□□□□□ -0.47
PRPF40A-211ENST00000493468 IL7RP16871 459 aa12.14□□□□□ -0.47
PRPF40A-211ENST00000493468 ACAA2P42765 397 aaKnown RBP12.14□□□□□ -0.47
PRPF40A-211ENST00000493468 MAGEB1P43366 347 aa12.14□□□□□ -0.47
PRPF40A-211ENST00000493468 COPZ1P61923 177 aa12.14□□□□□ -0.47
PRPF40A-211ENST00000493468 MVKQ03426 396 aa12.14□□□□□ -0.47
PRPF40A-211ENST00000493468 AVPI1Q5T686 147 aa12.14□□□□□ -0.47
PRPF40A-211ENST00000493468 SYT10Q6XYQ8 523 aa12.14□□□□□ -0.47
PRPF40A-211ENST00000493468 RETREG3Q86VR2 466 aa12.14□□□□□ -0.47
PRPF40A-211ENST00000493468 TREML1Q86YW5 311 aa12.14□□□□□ -0.47
PRPF40A-211ENST00000493468 ANKFN1Q8N957 763 aa12.14□□□□□ -0.47
PRPF40A-211ENST00000493468 MGARPQ8TDB4 240 aa12.14□□□□□ -0.47
PRPF40A-211ENST00000493468 OXGR1Q96P68 337 aa12.14□□□□□ -0.47
PRPF40A-211ENST00000493468 OR2M2Q96R28 347 aa12.14□□□□□ -0.47
PRPF40A-211ENST00000493468 DPY30Q9C005 99 aa12.14□□□□□ -0.47
PRPF40A-211ENST00000493468 NOP53Q9NZM5 478 aaKnown RBP12.14□□□□□ -0.47
PRPF40A-211ENST00000493468 MARCOQ9UEW3 520 aaPredicted RBP12.14□□□□□ -0.47
PRPF40A-211ENST00000493468 WIPI2Q9Y4P8 454 aa12.14□□□□□ -0.47
PRPF40A-211ENST00000493468 MMP24Q9Y5R2 645 aa12.14□□□□□ -0.47
PRPF40A-211ENST00000493468 TANC2Q9HCD6 1990 aa12.14□□□□□ -0.47
PRPF40A-211ENST00000493468 IGLV3-9A0A075B6K5 115 aa12.13□□□□□ -0.47
PRPF40A-211ENST00000493468 IGHV1-69-2A0A0G2JMI3 117 aa12.13□□□□□ -0.47
PRPF40A-211ENST00000493468 LOC102725191A0A1B0GVB3 256 aa12.13□□□□□ -0.47
PRPF40A-211ENST00000493468 PRSS51A0A1B0GVH4 220 aa12.13□□□□□ -0.47
PRPF40A-211ENST00000493468 CLDN25C9JDP6 229 aa12.13□□□□□ -0.47
PRPF40A-211ENST00000493468 COPEO14579 308 aa12.13□□□□□ -0.47
PRPF40A-211ENST00000493468 SEC14L2O76054 403 aa12.13□□□□□ -0.47
PRPF40A-211ENST00000493468 CD79AP11912 226 aa12.13□□□□□ -0.47
PRPF40A-211ENST00000493468 EMX2Q04743 252 aa12.13□□□□□ -0.47
PRPF40A-211ENST00000493468 SYPL1Q16563 259 aa12.13□□□□□ -0.47
PRPF40A-211ENST00000493468 NKPD1Q17RQ9 610 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms