RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 SLC16A1P53985 500 aa5.99□□□□□ -1.45
VPS52-219ENST00000493379 COPZ1P61923 177 aa5.99□□□□□ -1.45
VPS52-219ENST00000493379 CSNK2A1P68400 391 aaPredicted RBP5.99□□□□□ -1.45
VPS52-219ENST00000493379 SLC25A3Q00325 362 aa5.99□□□□□ -1.45
VPS52-219ENST00000493379 SRYQ05066 204 aa5.99□□□□□ -1.45
VPS52-219ENST00000493379 CEACAM7Q14002 265 aa5.99□□□□□ -1.45
VPS52-219ENST00000493379 PON3Q15166 354 aa5.99□□□□□ -1.45
VPS52-219ENST00000493379 OR1Q1Q15612 314 aa5.99□□□□□ -1.45
VPS52-219ENST00000493379 HBMQ6B0K9 141 aa5.99□□□□□ -1.45
VPS52-219ENST00000493379 GLYATQ6IB77 296 aa5.99□□□□□ -1.45
VPS52-219ENST00000493379 C16orf89Q6UX73 402 aa5.99□□□□□ -1.45
VPS52-219ENST00000493379 C3P1Q6ZMU1 363 aa5.99□□□□□ -1.45
VPS52-219ENST00000493379 NCCRP1Q6ZVX7 275 aaPredicted RBP5.99□□□□□ -1.45
VPS52-219ENST00000493379 TSEN54Q7Z6J9 526 aaKnown RBP5.99□□□□□ -1.45
VPS52-219ENST00000493379 HMGN2P46Q86SG4 172 aa5.99□□□□□ -1.45
VPS52-219ENST00000493379 SMYD1Q8NB12 490 aa5.99□□□□□ -1.45
VPS52-219ENST00000493379 C1orf162Q8NEQ5 155 aaPredicted RBP5.99□□□□□ -1.45
VPS52-219ENST00000493379 MFSD8Q8NHS3 518 aa5.99□□□□□ -1.45
VPS52-219ENST00000493379 ZNF563Q8TA94 476 aa5.99□□□□□ -1.45
VPS52-219ENST00000493379 FNDC9Q8TBE3 224 aa5.99□□□□□ -1.45
VPS52-219ENST00000493379 LIPHQ8WWY8 451 aa5.99□□□□□ -1.45
VPS52-219ENST00000493379 FIG4Q92562 907 aa5.99□□□□□ -1.45
VPS52-219ENST00000493379 STARD4Q96DR4 205 aa5.99□□□□□ -1.45
VPS52-219ENST00000493379 SLC47A1Q96FL8 570 aa5.99□□□□□ -1.45
VPS52-219ENST00000493379 SLC41A3Q96GZ6 507 aa5.99□□□□□ -1.45
VPS52-219ENST00000493379 GMPPAQ96IJ6 420 aaPredicted RBP5.99□□□□□ -1.45
VPS52-219ENST00000493379 BOD1Q96IK1 185 aa5.99□□□□□ -1.45
VPS52-219ENST00000493379 ZNF845Q96IR2 970 aaPredicted RBP5.99□□□□□ -1.45
VPS52-219ENST00000493379 MPP4Q96JB8 637 aa5.99□□□□□ -1.45
VPS52-219ENST00000493379 ARL5BQ96KC2 179 aa5.99□□□□□ -1.45
VPS52-219ENST00000493379 C7orf34Q96L11 122 aa5.99□□□□□ -1.45
VPS52-219ENST00000493379 TRIB1Q96RU8 372 aa5.99□□□□□ -1.45
VPS52-219ENST00000493379 CDRT15Q96T59 188 aa5.99□□□□□ -1.45
VPS52-219ENST00000493379 TMEM43Q9BTV4 400 aa5.99□□□□□ -1.45
VPS52-219ENST00000493379 PTDSS2Q9BVG9 487 aa5.99□□□□□ -1.45
VPS52-219ENST00000493379 SRXN1Q9BYN0 137 aa5.99□□□□□ -1.45
VPS52-219ENST00000493379 SLC19A3Q9BZV2 496 aa5.99□□□□□ -1.45
VPS52-219ENST00000493379 MUC13Q9H3R2 512 aa5.99□□□□□ -1.45
VPS52-219ENST00000493379 PIGMQ9H3S5 423 aa5.99□□□□□ -1.45
VPS52-219ENST00000493379 CACYBPQ9HB71 228 aaKnown RBP5.99□□□□□ -1.45
VPS52-219ENST00000493379 C19orf73Q9NVV2 129 aa5.99□□□□□ -1.45
VPS52-219ENST00000493379 COQ3Q9NZJ6 369 aa5.99□□□□□ -1.45
VPS52-219ENST00000493379 MCTS1Q9ULC4 181 aaKnown RBP5.99□□□□□ -1.45
VPS52-219ENST00000493379 PRPF19Q9UMS4 504 aaKnown RBP5.99□□□□□ -1.45
VPS52-219ENST00000493379 CAMK2AQ9UQM7 478 aa5.99□□□□□ -1.45
VPS52-219ENST00000493379 SPIN1Q9Y657 262 aaPredicted RBP5.99□□□□□ -1.45
VPS52-219ENST00000493379 ANK3Q12955 4377 aaKnown RBP5.98□□□□□ -1.45
VPS52-219ENST00000493379 IGKV1D-42A0A075B6H8 117 aa5.98□□□□□ -1.45
VPS52-219ENST00000493379 A0A1W2PNV4 684 aa5.98□□□□□ -1.45
VPS52-219ENST00000493379 ZC3H12DA2A288 527 aaKnown RBP5.98□□□□□ -1.45
VPS52-219ENST00000493379 LIPT2A6NK58 231 aa5.98□□□□□ -1.45
VPS52-219ENST00000493379 SLC22A20A6NK97 555 aa5.98□□□□□ -1.45
VPS52-219ENST00000493379 ZNF716A6NP11 495 aa5.98□□□□□ -1.45
VPS52-219ENST00000493379 A8MXE2 369 aa5.98□□□□□ -1.45
VPS52-219ENST00000493379 INAFM1C9JVW0 142 aa5.98□□□□□ -1.45
VPS52-219ENST00000493379 ACOT8O14734 319 aa5.98□□□□□ -1.45
VPS52-219ENST00000493379 TNFSF11O14788 317 aa5.98□□□□□ -1.45
VPS52-219ENST00000493379 SMAD9O15198 467 aaKnown RBP5.98□□□□□ -1.45
VPS52-219ENST00000493379 CHP2O43745 196 aa5.98□□□□□ -1.45
VPS52-219ENST00000493379 OR2T1O43869 369 aa5.98□□□□□ -1.45
VPS52-219ENST00000493379 CXCL13O43927 109 aa5.98□□□□□ -1.45
VPS52-219ENST00000493379 EIF1BO60739 113 aaKnown RBP5.98□□□□□ -1.45
VPS52-219ENST00000493379 CYP7B1O75881 506 aa5.98□□□□□ -1.45
VPS52-219ENST00000493379 PRSS23O95084 383 aa5.98□□□□□ -1.45
VPS52-219ENST00000493379 OR5F1O95221 314 aa5.98□□□□□ -1.45
VPS52-219ENST00000493379 CNOT4O95628 575 aaKnown RBP5.98□□□□□ -1.45
VPS52-219ENST00000493379 HPXP02790 462 aa5.98□□□□□ -1.45
VPS52-219ENST00000493379 FUT4P22083 530 aa5.98□□□□□ -1.45
VPS52-219ENST00000493379 ENPP1P22413 925 aa5.98□□□□□ -1.45
VPS52-219ENST00000493379 CXCR1P25024 350 aa5.98□□□□□ -1.45
VPS52-219ENST00000493379 AQP1P29972 269 aa5.98□□□□□ -1.45
VPS52-219ENST00000493379 PEX19P40855 299 aa5.98□□□□□ -1.45
VPS52-219ENST00000493379 CPA2P48052 419 aa5.98□□□□□ -1.45
VPS52-219ENST00000493379 DIO1P49895 249 aa5.98□□□□□ -1.45
VPS52-219ENST00000493379 SCAND1P57086 179 aa5.98□□□□□ -1.45
VPS52-219ENST00000493379 ADAM8P78325 824 aa5.98□□□□□ -1.45
VPS52-219ENST00000493379 HOXC5Q00444 222 aa5.98□□□□□ -1.45
VPS52-219ENST00000493379 FOXF2Q12947 444 aa5.98□□□□□ -1.45
VPS52-219ENST00000493379 MYBPHQ13203 477 aa5.98□□□□□ -1.45
VPS52-219ENST00000493379 TRIM25Q14258 630 aaKnown RBP5.98□□□□□ -1.45
VPS52-219ENST00000493379 SLC17A1Q14916 467 aa5.98□□□□□ -1.45
VPS52-219ENST00000493379 RNPS1Q15287 305 aaKnown RBP5.98□□□□□ -1.45
VPS52-219ENST00000493379 CYBRD1Q53TN4 286 aa5.98□□□□□ -1.45
VPS52-219ENST00000493379 ABLIM2Q6H8Q1 611 aa5.98□□□□□ -1.45
VPS52-219ENST00000493379 PAQR6Q6TCH4 344 aa5.98□□□□□ -1.45
VPS52-219ENST00000493379 RINLQ6ZS11 566 aa5.98□□□□□ -1.45
VPS52-219ENST00000493379 CHMP1BQ7LBR1 199 aa5.98□□□□□ -1.45
VPS52-219ENST00000493379 RANBP3LQ86VV4 465 aaPredicted RBP5.98□□□□□ -1.45
VPS52-219ENST00000493379 CCDC71Q8IV32 467 aaPredicted RBP5.98□□□□□ -1.45
VPS52-219ENST00000493379 DEFB107AQ8IZN7 70 aa5.98□□□□□ -1.45
VPS52-219ENST00000493379 TMCO5AQ8N6Q1 288 aa5.98□□□□□ -1.45
VPS52-219ENST00000493379 RELL2Q8NC24 303 aaPredicted RBP5.98□□□□□ -1.45
VPS52-219ENST00000493379 LZICQ8WZA0 190 aa5.98□□□□□ -1.45
VPS52-219ENST00000493379 SDCCAG3Q96C92 435 aa5.98□□□□□ -1.45
VPS52-219ENST00000493379 DDIT4LQ96D03 193 aa5.98□□□□□ -1.45
VPS52-219ENST00000493379 C14orf79Q96F83 325 aa5.98□□□□□ -1.45
VPS52-219ENST00000493379 MCHR1Q99705 422 aa5.98□□□□□ -1.45
VPS52-219ENST00000493379 FOXC2Q99958 501 aa5.98□□□□□ -1.45
VPS52-219ENST00000493379 KCTD14Q9BQ13 255 aaPredicted RBP5.98□□□□□ -1.45
VPS52-219ENST00000493379 PSD2Q9BQI7 771 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms