RNA–Protein interactions for RNA: ENST00000492539.5

NELFE-212, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-212ENST00000492539 LIN52Q52LA3 116 aa17.3■□□□□ 0.36
NELFE-212ENST00000492539 REP15Q6BDI9 236 aa17.3■□□□□ 0.36
NELFE-212ENST00000492539 TMEM225Q6GV28 225 aa17.3■□□□□ 0.36
NELFE-212ENST00000492539 WBP2NLQ6ICG8 309 aa17.3■□□□□ 0.36
NELFE-212ENST00000492539 IL17RELQ6ZVW7 336 aa17.3■□□□□ 0.36
NELFE-212ENST00000492539 LINGO2Q7L985 606 aa17.3■□□□□ 0.36
NELFE-212ENST00000492539 VRK2Q86Y07 508 aa17.3■□□□□ 0.36
NELFE-212ENST00000492539 ANKS4BQ8N8V4 417 aa17.3■□□□□ 0.36
NELFE-212ENST00000492539 RP9Q8TA86 221 aaKnown RBP17.3■□□□□ 0.36
NELFE-212ENST00000492539 MAGEE2Q8TD90 523 aaPredicted RBP17.3■□□□□ 0.36
NELFE-212ENST00000492539 BCL2L2Q92843 193 aaPredicted RBP17.3■□□□□ 0.36
NELFE-212ENST00000492539 ANKRD27Q96NW4 1050 aa17.3■□□□□ 0.36
NELFE-212ENST00000492539 FOXN4Q96NZ1 517 aa17.3■□□□□ 0.36
NELFE-212ENST00000492539 ALKBH3Q96Q83 286 aaPredicted RBP17.3■□□□□ 0.36
NELFE-212ENST00000492539 CGREF1Q99674 301 aa17.3■□□□□ 0.36
NELFE-212ENST00000492539 C19orf24Q9BVV8 132 aa17.3■□□□□ 0.36
NELFE-212ENST00000492539 MYLK2Q9H1R3 596 aa17.3■□□□□ 0.36
NELFE-212ENST00000492539 NELFAQ9H3P2 528 aa17.3■□□□□ 0.36
NELFE-212ENST00000492539 IKZF5Q9H5V7 419 aa17.3■□□□□ 0.36
NELFE-212ENST00000492539 CALML5Q9NZT1 146 aa17.3■□□□□ 0.36
NELFE-212ENST00000492539 LOC100653049A0A140TA62 436 aa17.29■□□□□ 0.36
NELFE-212ENST00000492539 OR6C65A6NJZ3 312 aa17.29■□□□□ 0.36
NELFE-212ENST00000492539 EVPLLA8MZ36 301 aa17.29■□□□□ 0.36
NELFE-212ENST00000492539 MRASO14807 208 aa17.29■□□□□ 0.36
NELFE-212ENST00000492539 KRT33AO76009 404 aa17.29■□□□□ 0.36
NELFE-212ENST00000492539 KRT34O76011 436 aa17.29■□□□□ 0.36
NELFE-212ENST00000492539 IGLV1-44P01699 117 aa17.29■□□□□ 0.36
NELFE-212ENST00000492539 CRYAAP02489 173 aa17.29■□□□□ 0.36
NELFE-212ENST00000492539 NAAAQ02083 359 aa17.29■□□□□ 0.36
NELFE-212ENST00000492539 ADIPOQQ15848 244 aa17.29■□□□□ 0.36
NELFE-212ENST00000492539 MMEL1Q495T6 779 aa17.29■□□□□ 0.36
NELFE-212ENST00000492539 EPHX4Q8IUS5 362 aa17.29■□□□□ 0.36
NELFE-212ENST00000492539 CADM2Q8N3J6 435 aa17.29■□□□□ 0.36
NELFE-212ENST00000492539 OR52P1PQ8NH57 321 aa17.29■□□□□ 0.36
NELFE-212ENST00000492539 SLC38A5Q8WUX1 472 aa17.29■□□□□ 0.36
NELFE-212ENST00000492539 VRK1Q99986 396 aaPredicted RBP17.29■□□□□ 0.36
NELFE-212ENST00000492539 KCNS3Q9BQ31 491 aa17.29■□□□□ 0.36
NELFE-212ENST00000492539 LINC00470Q9BZP3 86 aa17.29■□□□□ 0.36
NELFE-212ENST00000492539 PLK3Q9H4B4 646 aa17.29■□□□□ 0.36
NELFE-212ENST00000492539 A4GALTQ9NPC4 353 aa17.29■□□□□ 0.36
NELFE-212ENST00000492539 ADPRHL2Q9NX46 363 aa17.29■□□□□ 0.36
NELFE-212ENST00000492539 ARL2BPQ9Y2Y0 163 aa17.29■□□□□ 0.36
NELFE-212ENST00000492539 TMEM247A6NEH6 219 aa17.28■□□□□ 0.36
NELFE-212ENST00000492539 TMEM229AB2RXF0 380 aa17.28■□□□□ 0.36
NELFE-212ENST00000492539 UPK3AO75631 287 aa17.28■□□□□ 0.36
NELFE-212ENST00000492539 NPPAP01160 153 aa17.28■□□□□ 0.36
NELFE-212ENST00000492539 BCHEP06276 602 aa17.28■□□□□ 0.36
NELFE-212ENST00000492539 NUDT7P0C024 238 aa17.28■□□□□ 0.36
NELFE-212ENST00000492539 CECR9P0C854 216 aa17.28■□□□□ 0.36
NELFE-212ENST00000492539 ZNF23P17027 643 aa17.28■□□□□ 0.36
NELFE-212ENST00000492539 PPOXP50336 477 aa17.28■□□□□ 0.36
NELFE-212ENST00000492539 CRISP3P54108 245 aa17.28■□□□□ 0.36
NELFE-212ENST00000492539 UBE2NP61088 152 aaKnown RBP17.28■□□□□ 0.36
NELFE-212ENST00000492539 COPZ1P61923 177 aa17.28■□□□□ 0.36
NELFE-212ENST00000492539 GCNT6Q5T4J0 391 aa17.28■□□□□ 0.36
NELFE-212ENST00000492539 RNF220Q5VTB9 566 aa17.28■□□□□ 0.36
NELFE-212ENST00000492539 C1orf140Q5VVS0 124 aa17.28■□□□□ 0.36
NELFE-212ENST00000492539 ANKRD16Q6P6B7 361 aa17.28■□□□□ 0.36
NELFE-212ENST00000492539 SLC46A3Q7Z3Q1 461 aa17.28■□□□□ 0.36
NELFE-212ENST00000492539 C10orf111Q8N326 155 aa17.28■□□□□ 0.36
NELFE-212ENST00000492539 FAM169BQ8N8A8 192 aa17.28■□□□□ 0.36
NELFE-212ENST00000492539 PCYOX1LQ8NBM8 494 aa17.28■□□□□ 0.36
NELFE-212ENST00000492539 C3orf49Q96BT1 292 aa17.28■□□□□ 0.36
NELFE-212ENST00000492539 CCT8L2Q96SF2 557 aa17.28■□□□□ 0.36
NELFE-212ENST00000492539 BPESC1Q9GZL8 116 aa17.28■□□□□ 0.36
NELFE-212ENST00000492539 RASD1Q9Y272 281 aa17.28■□□□□ 0.36
NELFE-212ENST00000492539 ZNF443Q9Y2A4 671 aaPredicted RBP17.28■□□□□ 0.36
NELFE-212ENST00000492539 CHST2Q9Y4C5 530 aa17.28■□□□□ 0.36
NELFE-212ENST00000492539 FXYD1O00168 92 aa17.27■□□□□ 0.36
NELFE-212ENST00000492539 FAM107AO95990 144 aa17.27■□□□□ 0.36
NELFE-212ENST00000492539 IGKV3-15P01624 115 aa17.27■□□□□ 0.36
NELFE-212ENST00000492539 OR4A8P0C604 315 aa17.27■□□□□ 0.36
NELFE-212ENST00000492539 COX4I1P13073 169 aa17.27■□□□□ 0.36
NELFE-212ENST00000492539 PRG2P13727 222 aa17.27■□□□□ 0.36
NELFE-212ENST00000492539 HOXB1P14653 301 aaPredicted RBP17.27■□□□□ 0.36
NELFE-212ENST00000492539 CALCRP30988 508 aa17.27■□□□□ 0.36
NELFE-212ENST00000492539 SRSF2Q01130 221 aaKnown RBP17.27■□□□□ 0.36
NELFE-212ENST00000492539 PRAMEF8Q5VWM4 474 aa17.27■□□□□ 0.36
NELFE-212ENST00000492539 PRAMEF7Q5VXH5 474 aa17.27■□□□□ 0.36
NELFE-212ENST00000492539 NIPAL3Q6P499 406 aa17.27■□□□□ 0.36
NELFE-212ENST00000492539 TREML1Q86YW5 311 aa17.27■□□□□ 0.36
NELFE-212ENST00000492539 NUP37Q8NFH4 326 aa17.27■□□□□ 0.36
NELFE-212ENST00000492539 LRRC58Q96CX6 371 aa17.27■□□□□ 0.36
NELFE-212ENST00000492539 TMEM19Q96HH6 336 aa17.27■□□□□ 0.36
NELFE-212ENST00000492539 SOX7Q9BT81 388 aa17.27■□□□□ 0.36
NELFE-212ENST00000492539 SEC61A2Q9H9S3 476 aa17.27■□□□□ 0.36
NELFE-212ENST00000492539 MOV10Q9HCE1 1003 aaKnown RBP17.27■□□□□ 0.36
NELFE-212ENST00000492539 FTCDNL1E5RQL4 147 aa17.26■□□□□ 0.35
NELFE-212ENST00000492539 RPL36A-HNRNPH2H7BZ11 118 aa17.26■□□□□ 0.35
NELFE-212ENST00000492539 FZD7O75084 574 aa17.26■□□□□ 0.35
NELFE-212ENST00000492539 ARAFP10398 606 aa17.26■□□□□ 0.35
NELFE-212ENST00000492539 HNF1AP20823 631 aa17.26■□□□□ 0.35
NELFE-212ENST00000492539 IDH3GP51553 393 aaPredicted RBP17.26■□□□□ 0.35
NELFE-212ENST00000492539 SH3BGRP55822 239 aaPredicted RBP17.26■□□□□ 0.35
NELFE-212ENST00000492539 MTPNP58546 118 aa17.26■□□□□ 0.35
NELFE-212ENST00000492539 TUBA1BP68363 451 aa17.26■□□□□ 0.35
NELFE-212ENST00000492539 TUBA4AP68366 448 aa17.26■□□□□ 0.35
NELFE-212ENST00000492539 CARTPTQ16568 116 aa17.26■□□□□ 0.35
NELFE-212ENST00000492539 ZSWIM7Q19AV6 140 aa17.26■□□□□ 0.35
NELFE-212ENST00000492539 IQCCQ4KMZ1 466 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms