RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-231ENST00000492170 TUBA1BP68363 451 aa13.34□□□□□ -0.27
MRPL55-231ENST00000492170 TUBA4AP68366 448 aa13.34□□□□□ -0.27
MRPL55-231ENST00000492170 HOXC5Q00444 222 aa13.34□□□□□ -0.27
MRPL55-231ENST00000492170 FADDQ13158 208 aa13.34□□□□□ -0.27
MRPL55-231ENST00000492170 RGNQ15493 299 aa13.34□□□□□ -0.27
MRPL55-231ENST00000492170 CARTPTQ16568 116 aa13.34□□□□□ -0.27
MRPL55-231ENST00000492170 AGKQ53H12 422 aa13.34□□□□□ -0.27
MRPL55-231ENST00000492170 SLC2A7Q6PXP3 512 aa13.34□□□□□ -0.27
MRPL55-231ENST00000492170 VHLLQ6RSH7 139 aa13.34□□□□□ -0.27
MRPL55-231ENST00000492170 C5orf46Q6UWT4 87 aa13.34□□□□□ -0.27
MRPL55-231ENST00000492170 C6orf89Q6UWU4 347 aa13.34□□□□□ -0.27
MRPL55-231ENST00000492170 TUBA1AQ71U36 451 aa13.34□□□□□ -0.27
MRPL55-231ENST00000492170 FAM169BQ8N8A8 192 aa13.34□□□□□ -0.27
MRPL55-231ENST00000492170 OR4F15Q8NGB8 312 aa13.34□□□□□ -0.27
MRPL55-231ENST00000492170 C12orf10Q9HB07 376 aa13.34□□□□□ -0.27
MRPL55-231ENST00000492170 FBXO9Q9UK97 447 aaPredicted RBP13.34□□□□□ -0.27
MRPL55-231ENST00000492170 PCDHB14Q9Y5E9 798 aa13.34□□□□□ -0.27
MRPL55-231ENST00000492170 GMEB1Q9Y692 573 aa13.34□□□□□ -0.27
MRPL55-231ENST00000492170 TRBV5-3A0A0A0MS03 114 aa13.33□□□□□ -0.28
MRPL55-231ENST00000492170 LOC390937A0A1W2PQ73 354 aa13.33□□□□□ -0.28
MRPL55-231ENST00000492170 CLIC1O00299 241 aa13.33□□□□□ -0.28
MRPL55-231ENST00000492170 AIM2O14862 343 aa13.33□□□□□ -0.28
MRPL55-231ENST00000492170 AKAP8O43823 692 aaKnown RBP13.33□□□□□ -0.28
MRPL55-231ENST00000492170 OR2T1O43869 369 aa13.33□□□□□ -0.28
MRPL55-231ENST00000492170 SLC43A1O75387 559 aa13.33□□□□□ -0.28
MRPL55-231ENST00000492170 IGLV1-44P01699 117 aa13.33□□□□□ -0.28
MRPL55-231ENST00000492170 NUDT7P0C024 238 aa13.33□□□□□ -0.28
MRPL55-231ENST00000492170 OR4A8P0C604 315 aa13.33□□□□□ -0.28
MRPL55-231ENST00000492170 BMP2P12643 396 aa13.33□□□□□ -0.28
MRPL55-231ENST00000492170 APEHP13798 732 aaKnown RBP13.33□□□□□ -0.28
MRPL55-231ENST00000492170 EGR4Q05215 589 aa13.33□□□□□ -0.28
MRPL55-231ENST00000492170 C1DQ13901 141 aaKnown RBP13.33□□□□□ -0.28
MRPL55-231ENST00000492170 EFNB3Q15768 340 aa13.33□□□□□ -0.28
MRPL55-231ENST00000492170 ADIPOQQ15848 244 aa13.33□□□□□ -0.28
MRPL55-231ENST00000492170 FAM166AQ6J272 317 aa13.33□□□□□ -0.28
MRPL55-231ENST00000492170 KDM8Q8N371 416 aa13.33□□□□□ -0.28
MRPL55-231ENST00000492170 GPR137CQ8N3F9 429 aa13.33□□□□□ -0.28
MRPL55-231ENST00000492170 ANKS4BQ8N8V4 417 aa13.33□□□□□ -0.28
MRPL55-231ENST00000492170 ANKK1Q8NFD2 765 aa13.33□□□□□ -0.28
MRPL55-231ENST00000492170 TSPEARQ8WU66 669 aa13.33□□□□□ -0.28
MRPL55-231ENST00000492170 C10orf82Q8WW14 230 aa13.33□□□□□ -0.28
MRPL55-231ENST00000492170 SLC38A4Q969I6 547 aa13.33□□□□□ -0.28
MRPL55-231ENST00000492170 MAL2Q969L2 176 aa13.33□□□□□ -0.28
MRPL55-231ENST00000492170 KTI12Q96EK9 354 aaPredicted RBP13.33□□□□□ -0.28
MRPL55-231ENST00000492170 OXGR1Q96P68 337 aa13.33□□□□□ -0.28
MRPL55-231ENST00000492170 NELFAQ9H3P2 528 aa13.33□□□□□ -0.28
MRPL55-231ENST00000492170 PLK3Q9H4B4 646 aa13.33□□□□□ -0.28
MRPL55-231ENST00000492170 MRGBPQ9NV56 204 aa13.33□□□□□ -0.28
MRPL55-231ENST00000492170 YLPM1P49750 1951 aaKnown RBP13.32□□□□□ -0.28
MRPL55-231ENST00000492170 VSTM5A8MXK1 200 aa13.32□□□□□ -0.28
MRPL55-231ENST00000492170 RPL36A-HNRNPH2H7BZ11 118 aa13.32□□□□□ -0.28
MRPL55-231ENST00000492170 FZD7O75084 574 aa13.32□□□□□ -0.28
MRPL55-231ENST00000492170 ZNF432O94892 652 aa13.32□□□□□ -0.28
MRPL55-231ENST00000492170 IGKV3-15P01624 115 aa13.32□□□□□ -0.28
MRPL55-231ENST00000492170 ERCC1P07992 297 aaPredicted RBP13.32□□□□□ -0.28
MRPL55-231ENST00000492170 ETS2P15036 469 aa13.32□□□□□ -0.28
MRPL55-231ENST00000492170 PRKAR1BP31321 381 aa13.32□□□□□ -0.28
MRPL55-231ENST00000492170 PPOXP50336 477 aa13.32□□□□□ -0.28
MRPL55-231ENST00000492170 IL1RL1Q01638 556 aa13.32□□□□□ -0.28
MRPL55-231ENST00000492170 IQCCQ4KMZ1 466 aa13.32□□□□□ -0.28
MRPL55-231ENST00000492170 PAGE3Q5JUK9 113 aa13.32□□□□□ -0.28
MRPL55-231ENST00000492170 FAM69AQ5T7M9 428 aa13.32□□□□□ -0.28
MRPL55-231ENST00000492170 MSRB3Q8IXL7 192 aa13.32□□□□□ -0.28
MRPL55-231ENST00000492170 ZNF540Q8NDQ6 660 aa13.32□□□□□ -0.28
MRPL55-231ENST00000492170 PIK3C3Q8NEB9 887 aa13.32□□□□□ -0.28
MRPL55-231ENST00000492170 NUP37Q8NFH4 326 aa13.32□□□□□ -0.28
MRPL55-231ENST00000492170 RAB1BQ9H0U4 201 aa13.32□□□□□ -0.28
MRPL55-231ENST00000492170 CHODLQ9H9P2 273 aa13.32□□□□□ -0.28
MRPL55-231ENST00000492170 SLC25A37Q9NYZ2 338 aa13.32□□□□□ -0.28
MRPL55-231ENST00000492170 B3GAT1Q9P2W7 334 aa13.32□□□□□ -0.28
MRPL55-231ENST00000492170 SEC14L4Q9UDX3 406 aa13.32□□□□□ -0.28
MRPL55-231ENST00000492170 IGHV4-61A0A0C4DH41 118 aa13.31□□□□□ -0.28
MRPL55-231ENST00000492170 LOC100289279A0A1B0GTE1 492 aa13.31□□□□□ -0.28
MRPL55-231ENST00000492170 A0A1B0GWA3 101 aa13.31□□□□□ -0.28
MRPL55-231ENST00000492170 M0R082 166 aa13.31□□□□□ -0.28
MRPL55-231ENST00000492170 CBR1P16152 277 aa13.31□□□□□ -0.28
MRPL55-231ENST00000492170 SRD5A1P18405 259 aa13.31□□□□□ -0.28
MRPL55-231ENST00000492170 HNF1AP20823 631 aa13.31□□□□□ -0.28
MRPL55-231ENST00000492170 IGFBP5P24593 272 aa13.31□□□□□ -0.28
MRPL55-231ENST00000492170 CALCRP30988 508 aa13.31□□□□□ -0.28
MRPL55-231ENST00000492170 IDH3GP51553 393 aaPredicted RBP13.31□□□□□ -0.28
MRPL55-231ENST00000492170 NCALDP61601 193 aa13.31□□□□□ -0.28
MRPL55-231ENST00000492170 ARF1P84077 181 aaKnown RBP13.31□□□□□ -0.28
MRPL55-231ENST00000492170 ALG10BQ5I7T1 473 aa13.31□□□□□ -0.28
MRPL55-231ENST00000492170 GCNT6Q5T4J0 391 aa13.31□□□□□ -0.28
MRPL55-231ENST00000492170 KRT73Q86Y46 540 aa13.31□□□□□ -0.28
MRPL55-231ENST00000492170 CCDC36Q8IYA8 594 aa13.31□□□□□ -0.28
MRPL55-231ENST00000492170 DPP10Q8N608 796 aa13.31□□□□□ -0.28
MRPL55-231ENST00000492170 LSMEM1Q8N8F7 131 aa13.31□□□□□ -0.28
MRPL55-231ENST00000492170 ZNF417Q8TAU3 575 aa13.31□□□□□ -0.28
MRPL55-231ENST00000492170 DNAJA4Q8WW22 397 aaPredicted RBP13.31□□□□□ -0.28
MRPL55-231ENST00000492170 FOXN4Q96NZ1 517 aa13.31□□□□□ -0.28
MRPL55-231ENST00000492170 ZNF587Q96SQ5 575 aaPredicted RBP13.31□□□□□ -0.28
MRPL55-231ENST00000492170 SPATA5L1Q9BVQ7 753 aa13.31□□□□□ -0.28
MRPL55-231ENST00000492170 PRR14Q9BWN1 585 aa13.31□□□□□ -0.28
MRPL55-231ENST00000492170 ZNF442Q9H7R0 627 aa13.31□□□□□ -0.28
MRPL55-231ENST00000492170 SEC61A2Q9H9S3 476 aa13.31□□□□□ -0.28
MRPL55-231ENST00000492170 GPR35Q9HC97 309 aa13.31□□□□□ -0.28
MRPL55-231ENST00000492170 SAR1AQ9NR31 198 aa13.31□□□□□ -0.28
MRPL55-231ENST00000492170 SLAMF8Q9P0V8 285 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms