RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 HSD11B1P28845 292 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 GTF2E2P29084 291 aaKnown RBP4.27□□□□□ -1.73
RTN4-215ENST00000491592 SDC4P31431 198 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 TNFSF8P32971 234 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 AHRP35869 848 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 CRYBB2P43320 205 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 NPBWR2P48146 333 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 MRPL19P49406 292 aaKnown RBP4.27□□□□□ -1.73
RTN4-215ENST00000491592 GNG10P50151 68 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 PLK1P53350 603 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 MAPK12P53778 367 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 PLA2G16P53816 162 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 GNG2P59768 71 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 PITPNAQ00169 270 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 DSC1Q08554 894 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 SNTA1Q13424 505 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 VEZF1Q14119 521 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 TMEM132DQ14C87 1099 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 EMC2Q15006 297 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 NDUFAF6Q330K2 333 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 RFX4Q33E94 735 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 AKIRIN2Q53H80 203 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 KHDRBS2Q5VWX1 349 aaKnown RBP4.27□□□□□ -1.73
RTN4-215ENST00000491592 NADSYN1Q6IA69 706 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 C11orf87Q6NUJ2 197 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 FAM71F2Q6NXP2 309 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 ULK3Q6PHR2 472 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 LCLAT1Q6UWP7 414 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 HSDL2Q6YN16 418 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 TPRG1Q6ZUI0 275 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 H2BFWTQ7Z2G1 175 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 MRPL21Q7Z2W9 205 aaKnown RBP4.27□□□□□ -1.73
RTN4-215ENST00000491592 CMC1Q7Z7K0 106 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 TMEM135Q86UB9 458 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 TAC4Q86UU9 113 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 MFSD6LQ8IWD5 586 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 C8orf59Q8N0T1 100 aaPredicted RBP4.27□□□□□ -1.73
RTN4-215ENST00000491592 LGI2Q8N0V4 545 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 TMEM123Q8N131 208 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 NAGSQ8N159 534 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 EMC1Q8N766 993 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 CYB561A3Q8NBI2 242 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 ZNF555Q8NEP9 628 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 RHOXF1Q8NHV9 184 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 GRPEL2Q8TAA5 225 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 SPPL2BQ8TCT7 592 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 ASB5Q8WWX0 329 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 OTULINQ96BN8 352 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 AKR1E2Q96JD6 320 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 AMDHD1Q96NU7 426 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 OR6C1Q96RD1 312 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 COPS8Q99627 209 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 SLC30A2Q9BRI3 323 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 FEM1AQ9BSK4 669 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 DPH7Q9BTV6 452 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 SNRNP25Q9BV90 132 aaKnown RBP4.27□□□□□ -1.73
RTN4-215ENST00000491592 NAA50Q9GZZ1 169 aaKnown RBP4.27□□□□□ -1.73
RTN4-215ENST00000491592 LHPPQ9H008 270 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 TOLLIPQ9H0E2 274 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 OR2AG1Q9H205 316 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 PORCNQ9H237 461 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 OR51B6Q9H340 312 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 DPEP2Q9H4A9 486 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 NXF3Q9H4D5 531 aaKnown RBP4.27□□□□□ -1.73
RTN4-215ENST00000491592 MARCH7Q9H992 704 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 DNAJC4Q9NNZ3 241 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 C12orf4Q9NQ89 552 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 OR2S2Q9NQN1 319 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 EXD2Q9NVH0 621 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 NLGN3Q9NZ94 848 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 PTTG3PQ9NZH4 202 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 RNF7Q9UBF6 113 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 PLEKHB1Q9UF11 243 aaPredicted RBP4.27□□□□□ -1.73
RTN4-215ENST00000491592 PHF11Q9UIL8 331 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 C3orf18Q9UK00 162 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 EIF3LQ9Y262 564 aaKnown RBP4.27□□□□□ -1.73
RTN4-215ENST00000491592 ACOT9Q9Y305 439 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 ATG4BQ9Y4P1 393 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 CSDC2Q9Y534 153 aaKnown RBP4.27□□□□□ -1.73
RTN4-215ENST00000491592 URGCP-MRPS24S4R325 110 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 ZFC3H1O60293 1989 aaKnown RBP4.27□□□□□ -1.73
RTN4-215ENST00000491592 SSC5DA1L4H1 1573 aa4.27□□□□□ -1.73
RTN4-215ENST00000491592 PPIAL4CA0A0B4J2A2 164 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 A0A1B0GTI1 187 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 FRG2CA6NGY1 282 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 ZNF99A8MXY4 864 aaPredicted RBP4.26□□□□□ -1.73
RTN4-215ENST00000491592 FAM25AB3EWG3 89 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 FAM25CB3EWG5 89 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 FAM25GB3EWG6 89 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 M0QYV0 167 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 EI24O14681 340 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 EMC8O43402 210 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 XRCC3O43542 346 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 UPK1BO75841 260 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 AP2A1O95782 977 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 F10P00742 488 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 CST4P01036 141 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 SERPINE2P07093 398 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 MMP3P08254 477 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 RBP1P09455 135 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms