RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 OXGR1Q96P68 337 aa17.77■□□□□ 0.44
CLIP2-208ENST00000491075 JMJD8Q96S16 334 aa17.77■□□□□ 0.44
CLIP2-208ENST00000491075 PTDSS2Q9BVG9 487 aa17.77■□□□□ 0.44
CLIP2-208ENST00000491075 RBM4Q9BWF3 364 aaKnown RBP17.77■□□□□ 0.44
CLIP2-208ENST00000491075 LPAR2Q9HBW0 351 aa17.77■□□□□ 0.44
CLIP2-208ENST00000491075 FZD7O75084 574 aa17.76■□□□□ 0.43
CLIP2-208ENST00000491075 RGS9O75916 674 aaPredicted RBP17.76■□□□□ 0.43
CLIP2-208ENST00000491075 GAAP10253 952 aa17.76■□□□□ 0.43
CLIP2-208ENST00000491075 PRG2P13727 222 aa17.76■□□□□ 0.43
CLIP2-208ENST00000491075 LBPP18428 481 aa17.76■□□□□ 0.43
CLIP2-208ENST00000491075 CDKN2CP42773 168 aa17.76■□□□□ 0.43
CLIP2-208ENST00000491075 ETV4P43268 484 aa17.76■□□□□ 0.43
CLIP2-208ENST00000491075 RPS5P46782 204 aaKnown RBP17.76■□□□□ 0.43
CLIP2-208ENST00000491075 CRISP3P54108 245 aa17.76■□□□□ 0.43
CLIP2-208ENST00000491075 C1DQ13901 141 aaKnown RBP17.76■□□□□ 0.43
CLIP2-208ENST00000491075 LARS2Q15031 903 aaKnown RBP17.76■□□□□ 0.43
CLIP2-208ENST00000491075 MAPK11Q15759 364 aa17.76■□□□□ 0.43
CLIP2-208ENST00000491075 ATG16L1Q676U5 607 aa17.76■□□□□ 0.43
CLIP2-208ENST00000491075 PEG10Q86TG7 708 aaKnown RBP17.76■□□□□ 0.43
CLIP2-208ENST00000491075 ARMC7Q9H6L4 198 aa17.76■□□□□ 0.43
CLIP2-208ENST00000491075 B3GAT1Q9P2W7 334 aa17.76■□□□□ 0.43
CLIP2-208ENST00000491075 RAP2CQ9Y3L5 183 aa17.76■□□□□ 0.43
CLIP2-208ENST00000491075 TRAV20A0A0B4J274 112 aa17.75■□□□□ 0.43
CLIP2-208ENST00000491075 SEC14L2O76054 403 aa17.75■□□□□ 0.43
CLIP2-208ENST00000491075 KRT75O95678 551 aa17.75■□□□□ 0.43
CLIP2-208ENST00000491075 PNPP00491 289 aa17.75■□□□□ 0.43
CLIP2-208ENST00000491075 HPXP02790 462 aa17.75■□□□□ 0.43
CLIP2-208ENST00000491075 GSNP06396 782 aa17.75■□□□□ 0.43
CLIP2-208ENST00000491075 EPHA1P21709 976 aa17.75■□□□□ 0.43
CLIP2-208ENST00000491075 LIMS1P48059 325 aa17.75■□□□□ 0.43
CLIP2-208ENST00000491075 ARFIP2P53365 341 aa17.75■□□□□ 0.43
CLIP2-208ENST00000491075 TMEM33P57088 247 aa17.75■□□□□ 0.43
CLIP2-208ENST00000491075 RPS23P62266 143 aaKnown RBP17.75■□□□□ 0.43
CLIP2-208ENST00000491075 MRPS11P82912 194 aaKnown RBP17.75■□□□□ 0.43
CLIP2-208ENST00000491075 MSMPQ1L6U9 139 aa17.75■□□□□ 0.43
CLIP2-208ENST00000491075 GSG1Q2KHT4 349 aa17.75■□□□□ 0.43
CLIP2-208ENST00000491075 THSD4Q6ZMP0 1018 aa17.75■□□□□ 0.43
CLIP2-208ENST00000491075 CARM1Q86X55 608 aa17.75■□□□□ 0.43
CLIP2-208ENST00000491075 KIRREL3Q8IZU9 778 aa17.75■□□□□ 0.43
CLIP2-208ENST00000491075 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.75■□□□□ 0.43
CLIP2-208ENST00000491075 TEX37Q96LM6 180 aa17.75■□□□□ 0.43
CLIP2-208ENST00000491075 OR2M2Q96R28 347 aa17.75■□□□□ 0.43
CLIP2-208ENST00000491075 OR52E6Q96RD3 313 aa17.75■□□□□ 0.43
CLIP2-208ENST00000491075 CACYBPQ9HB71 228 aaKnown RBP17.75■□□□□ 0.43
CLIP2-208ENST00000491075 B3GNT2Q9NY97 397 aa17.75■□□□□ 0.43
CLIP2-208ENST00000491075 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.75■□□□□ 0.43
CLIP2-208ENST00000491075 NOX1Q9Y5S8 564 aa17.75■□□□□ 0.43
CLIP2-208ENST00000491075 AIM2O14862 343 aa17.74■□□□□ 0.43
CLIP2-208ENST00000491075 KCNAB3O43448 404 aa17.74■□□□□ 0.43
CLIP2-208ENST00000491075 SERPINE1P05121 402 aa17.74■□□□□ 0.43
CLIP2-208ENST00000491075 COL8A2P25067 703 aa17.74■□□□□ 0.43
CLIP2-208ENST00000491075 GLRXP35754 106 aa17.74■□□□□ 0.43
CLIP2-208ENST00000491075 RPL14P50914 215 aaKnown RBP17.74■□□□□ 0.43
CLIP2-208ENST00000491075 ABCE1P61221 599 aaKnown RBP17.74■□□□□ 0.43
CLIP2-208ENST00000491075 EGR4Q05215 589 aa17.74■□□□□ 0.43
CLIP2-208ENST00000491075 TRMT5Q32P41 509 aaKnown RBP17.74■□□□□ 0.43
CLIP2-208ENST00000491075 OGFOD2Q6N063 350 aa17.74■□□□□ 0.43
CLIP2-208ENST00000491075 SERPINA11Q86U17 422 aa17.74■□□□□ 0.43
CLIP2-208ENST00000491075 TMEM123Q8N131 208 aa17.74■□□□□ 0.43
CLIP2-208ENST00000491075 CLIP4Q8N3C7 705 aa17.74■□□□□ 0.43
CLIP2-208ENST00000491075 MS4A3Q96HJ5 214 aa17.74■□□□□ 0.43
CLIP2-208ENST00000491075 PKNOX2Q96KN3 472 aa17.74■□□□□ 0.43
CLIP2-208ENST00000491075 SYT3Q9BQG1 590 aa17.74■□□□□ 0.43
CLIP2-208ENST00000491075 ZNF416Q9BWM5 594 aa17.74■□□□□ 0.43
CLIP2-208ENST00000491075 SPATA9Q9BWV2 254 aa17.74■□□□□ 0.43
CLIP2-208ENST00000491075 ZNF275Q9NSD4 429 aaPredicted RBP17.74■□□□□ 0.43
CLIP2-208ENST00000491075 TREM2Q9NZC2 230 aa17.74■□□□□ 0.43
CLIP2-208ENST00000491075 SEC14L4Q9UDX3 406 aa17.74■□□□□ 0.43
CLIP2-208ENST00000491075 ZNF232Q9UNY5 417 aa17.74■□□□□ 0.43
CLIP2-208ENST00000491075 TYROBPO43914 113 aa17.73■□□□□ 0.43
CLIP2-208ENST00000491075 HLA-HP01893 362 aa17.73■□□□□ 0.43
CLIP2-208ENST00000491075 BCHEP06276 602 aa17.73■□□□□ 0.43
CLIP2-208ENST00000491075 CD79AP11912 226 aa17.73■□□□□ 0.43
CLIP2-208ENST00000491075 ZNF35P13682 527 aa17.73■□□□□ 0.43
CLIP2-208ENST00000491075 ZNF14P17017 642 aaPredicted RBP17.73■□□□□ 0.43
CLIP2-208ENST00000491075 TCN1P20061 433 aaPredicted RBP17.73■□□□□ 0.43
CLIP2-208ENST00000491075 ALDH3B1P43353 468 aa17.73■□□□□ 0.43
CLIP2-208ENST00000491075 NME5P56597 212 aa17.73■□□□□ 0.43
CLIP2-208ENST00000491075 UFM1P61960 85 aa17.73■□□□□ 0.43
CLIP2-208ENST00000491075 CHI3L2Q15782 390 aa17.73■□□□□ 0.43
CLIP2-208ENST00000491075 FAHD2BQ6P2I3 314 aaPredicted RBP17.73■□□□□ 0.43
CLIP2-208ENST00000491075 C5orf46Q6UWT4 87 aa17.73■□□□□ 0.43
CLIP2-208ENST00000491075 KTI12Q96EK9 354 aaPredicted RBP17.73■□□□□ 0.43
CLIP2-208ENST00000491075 FAHD2AQ96GK7 314 aa17.73■□□□□ 0.43
CLIP2-208ENST00000491075 NUF2Q9BZD4 464 aa17.73■□□□□ 0.43
CLIP2-208ENST00000491075 ZNF385DQ9H6B1 395 aa17.73■□□□□ 0.43
CLIP2-208ENST00000491075 LOC102725191A0A1B0GVB3 256 aa17.72■□□□□ 0.43
CLIP2-208ENST00000491075 M0R082 166 aa17.72■□□□□ 0.43
CLIP2-208ENST00000491075 M0R3G1 203 aa17.72■□□□□ 0.43
CLIP2-208ENST00000491075 WNT9BO14905 357 aa17.72■□□□□ 0.43
CLIP2-208ENST00000491075 PPIHO43447 177 aaKnown RBP17.72■□□□□ 0.43
CLIP2-208ENST00000491075 TRAF3IP2O43734 574 aaPredicted RBP17.72■□□□□ 0.43
CLIP2-208ENST00000491075 OR2T1O43869 369 aa17.72■□□□□ 0.43
CLIP2-208ENST00000491075 ANPEPP15144 967 aa17.72■□□□□ 0.43
CLIP2-208ENST00000491075 CREB1P16220 341 aa17.72■□□□□ 0.43
CLIP2-208ENST00000491075 MVDP53602 400 aa17.72■□□□□ 0.43
CLIP2-208ENST00000491075 LMO4P61968 165 aa17.72■□□□□ 0.43
CLIP2-208ENST00000491075 GALK2Q01415 458 aa17.72■□□□□ 0.43
CLIP2-208ENST00000491075 IFFO1Q0D2I5 559 aa17.72■□□□□ 0.43
CLIP2-208ENST00000491075 FAM69AQ5T7M9 428 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms