RNA–Protein interactions for RNA: ENST00000490814.6

BRD9-209, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,477 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-209ENST00000490814 E2F1Q01094 437 aa9.36□□□□□ -0.91
BRD9-209ENST00000490814 PDZK1IP1Q13113 114 aa9.36□□□□□ -0.91
BRD9-209ENST00000490814 HABP2Q14520 560 aaPredicted RBP9.36□□□□□ -0.91
BRD9-209ENST00000490814 ERN2Q76MJ5 926 aaKnown RBP9.36□□□□□ -0.91
BRD9-209ENST00000490814 HLA-CQ95604 372 aa9.36□□□□□ -0.91
BRD9-209ENST00000490814 S100PBPQ96BU1 408 aa9.36□□□□□ -0.91
BRD9-209ENST00000490814 INSM2Q96T92 566 aaPredicted RBP9.36□□□□□ -0.91
BRD9-209ENST00000490814 SCN2AQ99250 2005 aa9.36□□□□□ -0.91
BRD9-209ENST00000490814 C7orf50Q9BRJ6 194 aaKnown RBP9.36□□□□□ -0.91
BRD9-209ENST00000490814 GPR61Q9BZJ8 451 aa9.36□□□□□ -0.91
BRD9-209ENST00000490814 PCBD2Q9H0N5 130 aa9.36□□□□□ -0.91
BRD9-209ENST00000490814 USP36Q9P275 1121 aaKnown RBP9.36□□□□□ -0.91
BRD9-209ENST00000490814 TRAV27A0A087WT01 109 aa9.35□□□□□ -0.91
BRD9-209ENST00000490814 MARCH11A6NNE9 402 aa9.35□□□□□ -0.91
BRD9-209ENST00000490814 SPINT1O43278 529 aa9.35□□□□□ -0.91
BRD9-209ENST00000490814 PAPLNO95428 1278 aa9.35□□□□□ -0.91
BRD9-209ENST00000490814 HCKP08631 526 aa9.35□□□□□ -0.91
BRD9-209ENST00000490814 LAMP2P13473 410 aa9.35□□□□□ -0.91
BRD9-209ENST00000490814 SKP2Q13309 424 aa9.35□□□□□ -0.91
BRD9-209ENST00000490814 DHRS7BQ6IAN0 325 aaPredicted RBP9.35□□□□□ -0.91
BRD9-209ENST00000490814 C11orf88Q6PI97 169 aa9.35□□□□□ -0.91
BRD9-209ENST00000490814 YAF2Q8IY57 180 aa9.35□□□□□ -0.91
BRD9-209ENST00000490814 POC1BQ8TC44 478 aa9.35□□□□□ -0.91
BRD9-209ENST00000490814 CNOT9Q92600 299 aaKnown RBP9.35□□□□□ -0.91
BRD9-209ENST00000490814 C4orf36Q96KX1 117 aa9.35□□□□□ -0.91
BRD9-209ENST00000490814 CD180Q99467 661 aa9.35□□□□□ -0.91
BRD9-209ENST00000490814 NDC1Q9BTX1 674 aa9.35□□□□□ -0.91
BRD9-209ENST00000490814 ADAT1Q9BUB4 502 aaKnown RBP9.35□□□□□ -0.91
BRD9-209ENST00000490814 HCAR1Q9BXC0 346 aa9.35□□□□□ -0.91
BRD9-209ENST00000490814 GDE1Q9NZC3 331 aa9.35□□□□□ -0.91
BRD9-209ENST00000490814 CBLCQ9ULV8 474 aa9.35□□□□□ -0.91
BRD9-209ENST00000490814 GPR34Q9UPC5 381 aa9.35□□□□□ -0.91
BRD9-209ENST00000490814 SPTBP11277 2137 aa9.35□□□□□ -0.91
BRD9-209ENST00000490814 FAM86C2PA6NEL3 165 aa9.35□□□□□ -0.91
BRD9-209ENST00000490814 KDM4EB2RXH2 506 aaPredicted RBP9.35□□□□□ -0.91
BRD9-209ENST00000490814 RAB3DO95716 219 aa9.35□□□□□ -0.91
BRD9-209ENST00000490814 RLN1P04808 185 aa9.35□□□□□ -0.91
BRD9-209ENST00000490814 CEBPBP17676 345 aa9.35□□□□□ -0.91
BRD9-209ENST00000490814 NAA10P41227 235 aaPredicted RBP9.35□□□□□ -0.91
BRD9-209ENST00000490814 OMPP47874 163 aa9.35□□□□□ -0.91
BRD9-209ENST00000490814 OR12D2P58182 307 aa9.35□□□□□ -0.91
BRD9-209ENST00000490814 CDK3Q00526 305 aa9.35□□□□□ -0.91
BRD9-209ENST00000490814 PRDX1Q06830 199 aaKnown RBP9.35□□□□□ -0.91
BRD9-209ENST00000490814 USF2Q15853 346 aaPredicted RBP9.35□□□□□ -0.91
BRD9-209ENST00000490814 ACSM3Q53FZ2 586 aa9.35□□□□□ -0.91
BRD9-209ENST00000490814 SLC22A10Q63ZE4 541 aa9.35□□□□□ -0.91
BRD9-209ENST00000490814 KIAA1211LQ6NV74 962 aa9.35□□□□□ -0.91
BRD9-209ENST00000490814 SKA3Q8IX90 412 aa9.35□□□□□ -0.91
BRD9-209ENST00000490814 TMEFF1Q8IYR6 380 aa9.35□□□□□ -0.91
BRD9-209ENST00000490814 CDK20Q8IZL9 346 aa9.35□□□□□ -0.91
BRD9-209ENST00000490814 RELL2Q8NC24 303 aaPredicted RBP9.35□□□□□ -0.91
BRD9-209ENST00000490814 OR4E2Q8NGC2 313 aa9.35□□□□□ -0.91
BRD9-209ENST00000490814 PFN4Q8NHR9 129 aa9.35□□□□□ -0.91
BRD9-209ENST00000490814 ABHD4Q8TB40 342 aa9.35□□□□□ -0.91
BRD9-209ENST00000490814 THAP4Q8WY91 577 aa9.35□□□□□ -0.91
BRD9-209ENST00000490814 ORAI1Q96D31 301 aa9.35□□□□□ -0.91
BRD9-209ENST00000490814 GGACTQ9BVM4 153 aa9.35□□□□□ -0.91
BRD9-209ENST00000490814 ENKD1Q9H0I2 346 aa9.35□□□□□ -0.91
BRD9-209ENST00000490814 METTL9Q9H1A3 318 aa9.35□□□□□ -0.91
BRD9-209ENST00000490814 WSB2Q9NYS7 404 aaPredicted RBP9.35□□□□□ -0.91
BRD9-209ENST00000490814 MEX3AA1L020 520 aaKnown RBP9.35□□□□□ -0.91
BRD9-209ENST00000490814 FMO6PO60774 539 aa9.35□□□□□ -0.91
BRD9-209ENST00000490814 CRTAPO75718 401 aaPredicted RBP9.35□□□□□ -0.91
BRD9-209ENST00000490814 HOXC4P09017 264 aaPredicted RBP9.35□□□□□ -0.91
BRD9-209ENST00000490814 ANXA7P20073 488 aaKnown RBP9.35□□□□□ -0.91
BRD9-209ENST00000490814 HTR1FP30939 366 aa9.35□□□□□ -0.91
BRD9-209ENST00000490814 ELAVL3Q14576 367 aaKnown RBP9.35□□□□□ -0.91
BRD9-209ENST00000490814 CDNFQ49AH0 187 aa9.35□□□□□ -0.91
BRD9-209ENST00000490814 TP53I3Q53FA7 332 aa9.35□□□□□ -0.91
BRD9-209ENST00000490814 LIPNQ5VXI9 398 aa9.35□□□□□ -0.91
BRD9-209ENST00000490814 RPL13AP3Q6NVV1 102 aa9.35□□□□□ -0.91
BRD9-209ENST00000490814 FIGNL1Q6PIW4 674 aa9.35□□□□□ -0.91
BRD9-209ENST00000490814 LRRN1Q6UXK5 716 aa9.35□□□□□ -0.91
BRD9-209ENST00000490814 APOOLQ6UXV4 268 aa9.35□□□□□ -0.91
BRD9-209ENST00000490814 NHLRC1Q6VVB1 395 aa9.35□□□□□ -0.91
BRD9-209ENST00000490814 ZNF620Q6ZNG0 422 aa9.35□□□□□ -0.91
BRD9-209ENST00000490814 ZNF383Q8NA42 475 aa9.35□□□□□ -0.91
BRD9-209ENST00000490814 OR13C2Q8NGS9 318 aa9.35□□□□□ -0.91
BRD9-209ENST00000490814 DIO2Q92813 273 aa9.35□□□□□ -0.91
BRD9-209ENST00000490814 SLAMF9Q96A28 289 aa9.35□□□□□ -0.91
BRD9-209ENST00000490814 GUCD1Q96NT3 240 aa9.35□□□□□ -0.91
BRD9-209ENST00000490814 LRRC3BQ96PB8 259 aa9.35□□□□□ -0.91
BRD9-209ENST00000490814 UBL7Q96S82 380 aaPredicted RBP9.35□□□□□ -0.91
BRD9-209ENST00000490814 DMRTA2Q96SC8 542 aa9.35□□□□□ -0.91
BRD9-209ENST00000490814 C2orf88Q9BSF0 95 aa9.35□□□□□ -0.91
BRD9-209ENST00000490814 RPP25Q9BUL9 199 aaKnown RBP9.35□□□□□ -0.91
BRD9-209ENST00000490814 EDEM2Q9BV94 578 aa9.35□□□□□ -0.91
BRD9-209ENST00000490814 KRCC1Q9NPI7 259 aaPredicted RBP9.35□□□□□ -0.91
BRD9-209ENST00000490814 GFOD1Q9NXC2 390 aa9.35□□□□□ -0.91
BRD9-209ENST00000490814 FBXL4Q9UKA2 621 aa9.35□□□□□ -0.91
BRD9-209ENST00000490814 PCDHB10Q9UN67 800 aa9.35□□□□□ -0.91
BRD9-209ENST00000490814 ALPK2Q86TB3 2170 aa9.34□□□□□ -0.91
BRD9-209ENST00000490814 C4orf51C9J302 202 aa9.34□□□□□ -0.91
BRD9-209ENST00000490814 KRT33AO76009 404 aa9.34□□□□□ -0.91
BRD9-209ENST00000490814 UBL3O95164 117 aa9.34□□□□□ -0.91
BRD9-209ENST00000490814 MT-ND5P03915 603 aa9.34□□□□□ -0.91
BRD9-209ENST00000490814 PTHLHP12272 177 aa9.34□□□□□ -0.91
BRD9-209ENST00000490814 RAC2P15153 192 aa9.34□□□□□ -0.91
BRD9-209ENST00000490814 PSMB1P20618 241 aaKnown RBP9.34□□□□□ -0.91
BRD9-209ENST00000490814 STAT5AP42229 794 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms