RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 CD247P20963 164 aa27.41■■□□□ 1.98
LDB1-204ENST00000490751 MMEL1Q495T6 779 aa27.41■■□□□ 1.98
LDB1-204ENST00000490751 RABL3Q5HYI8 236 aa27.41■■□□□ 1.98
LDB1-204ENST00000490751 VANGL1Q8TAA9 524 aaPredicted RBP27.41■■□□□ 1.98
LDB1-204ENST00000490751 SLC26A7Q8TE54 656 aa27.41■■□□□ 1.98
LDB1-204ENST00000490751 BCL2L2Q92843 193 aaPredicted RBP27.41■■□□□ 1.98
LDB1-204ENST00000490751 SLC41A3Q96GZ6 507 aa27.41■■□□□ 1.98
LDB1-204ENST00000490751 ASPNQ9BXN1 380 aa27.41■■□□□ 1.98
LDB1-204ENST00000490751 FKRPQ9H9S5 495 aa27.41■■□□□ 1.98
LDB1-204ENST00000490751 SAR1AQ9NR31 198 aa27.41■■□□□ 1.98
LDB1-204ENST00000490751 ATP23Q9Y6H3 246 aa27.41■■□□□ 1.98
LDB1-204ENST00000490751 LOC102725191A0A1B0GVB3 256 aa27.4■■□□□ 1.98
LDB1-204ENST00000490751 CPSF4LA6NMK7 179 aaKnown RBP27.4■■□□□ 1.98
LDB1-204ENST00000490751 FXYD1O00168 92 aa27.4■■□□□ 1.98
LDB1-204ENST00000490751 HPRP00739 348 aa27.4■■□□□ 1.98
LDB1-204ENST00000490751 UBE2NP61088 152 aaKnown RBP27.4■■□□□ 1.98
LDB1-204ENST00000490751 GUCY1A3Q02108 690 aa27.4■■□□□ 1.98
LDB1-204ENST00000490751 COQ5Q5HYK3 327 aa27.4■■□□□ 1.98
LDB1-204ENST00000490751 REP15Q6BDI9 236 aa27.4■■□□□ 1.98
LDB1-204ENST00000490751 RBM45Q8IUH3 476 aaKnown RBP27.4■■□□□ 1.98
LDB1-204ENST00000490751 UEVLDQ8IX04 471 aa27.4■■□□□ 1.98
LDB1-204ENST00000490751 FBXL14Q8N1E6 418 aa27.4■■□□□ 1.98
LDB1-204ENST00000490751 MUC15Q8N387 334 aa27.4■■□□□ 1.98
LDB1-204ENST00000490751 C10orf53Q8N6V4 93 aa27.4■■□□□ 1.98
LDB1-204ENST00000490751 SCAIQ8N9R8 606 aa27.4■■□□□ 1.98
LDB1-204ENST00000490751 OR4D11Q8NGI4 311 aa27.4■■□□□ 1.98
LDB1-204ENST00000490751 LRRC58Q96CX6 371 aa27.4■■□□□ 1.98
LDB1-204ENST00000490751 MOGAT1Q96PD6 335 aa27.4■■□□□ 1.98
LDB1-204ENST00000490751 CBLN4Q9NTU7 201 aa27.4■■□□□ 1.98
LDB1-204ENST00000490751 GDF2Q9UK05 429 aaPredicted RBP27.4■■□□□ 1.98
LDB1-204ENST00000490751 A0A096LPE4 126 aa27.39■■□□□ 1.98
LDB1-204ENST00000490751 A0A1W2PPZ6 126 aa27.39■■□□□ 1.98
LDB1-204ENST00000490751 LRRN3E7EW58 273 aa27.39■■□□□ 1.98
LDB1-204ENST00000490751 ATP6V1G2-DDX39BF2Z307 99 aa27.39■■□□□ 1.98
LDB1-204ENST00000490751 MS4A18H0YCH9 400 aa27.39■■□□□ 1.98
LDB1-204ENST00000490751 MRASO14807 208 aa27.39■■□□□ 1.98
LDB1-204ENST00000490751 CHP2O43745 196 aa27.39■■□□□ 1.98
LDB1-204ENST00000490751 AKAP8O43823 692 aaKnown RBP27.39■■□□□ 1.98
LDB1-204ENST00000490751 ACVR1BP36896 505 aa27.39■■□□□ 1.98
LDB1-204ENST00000490751 FABP6P51161 128 aa27.39■■□□□ 1.98
LDB1-204ENST00000490751 SH3BGRP55822 239 aaPredicted RBP27.39■■□□□ 1.98
LDB1-204ENST00000490751 MAPRE2Q15555 327 aa27.39■■□□□ 1.98
LDB1-204ENST00000490751 MS4A18Q3C1V0 323 aa27.39■■□□□ 1.98
LDB1-204ENST00000490751 ENTPD8Q5MY95 495 aa27.39■■□□□ 1.98
LDB1-204ENST00000490751 C11orf71Q6IPW1 123 aa27.39■■□□□ 1.98
LDB1-204ENST00000490751 GPR137CQ8N3F9 429 aa27.39■■□□□ 1.98
LDB1-204ENST00000490751 HS6ST2Q96MM7 605 aa27.39■■□□□ 1.98
LDB1-204ENST00000490751 OR2M2Q96R28 347 aa27.39■■□□□ 1.98
LDB1-204ENST00000490751 SH3GL1Q99961 368 aa27.39■■□□□ 1.98
LDB1-204ENST00000490751 NELFAQ9H3P2 528 aa27.39■■□□□ 1.98
LDB1-204ENST00000490751 BBIP1A8MTZ0 92 aa27.38■■□□□ 1.97
LDB1-204ENST00000490751 RPL36A-HNRNPH2H7BZ11 118 aa27.38■■□□□ 1.97
LDB1-204ENST00000490751 HLA-DOBP13765 273 aa27.38■■□□□ 1.97
LDB1-204ENST00000490751 PMS2P3Q13401 168 aa27.38■■□□□ 1.97
LDB1-204ENST00000490751 KRTAP21-3Q3LHN1 58 aa27.38■■□□□ 1.97
LDB1-204ENST00000490751 ANKRD16Q6P6B7 361 aa27.38■■□□□ 1.97
LDB1-204ENST00000490751 PIK3C3Q8NEB9 887 aa27.38■■□□□ 1.97
LDB1-204ENST00000490751 ANKK1Q8NFD2 765 aa27.38■■□□□ 1.97
LDB1-204ENST00000490751 OR8J3Q8NGG0 315 aa27.38■■□□□ 1.97
LDB1-204ENST00000490751 MAGEE2Q8TD90 523 aaPredicted RBP27.38■■□□□ 1.97
LDB1-204ENST00000490751 ZNF317Q96PQ6 595 aaPredicted RBP27.38■■□□□ 1.97
LDB1-204ENST00000490751 CACNG6Q9BXT2 260 aa27.38■■□□□ 1.97
LDB1-204ENST00000490751 MRPL39Q9NYK5 338 aaKnown RBP27.38■■□□□ 1.97
LDB1-204ENST00000490751 CRYBA2P53672 197 aa27.37■■□□□ 1.97
LDB1-204ENST00000490751 TUBA1BP68363 451 aa27.37■■□□□ 1.97
LDB1-204ENST00000490751 TUBA4AP68366 448 aa27.37■■□□□ 1.97
LDB1-204ENST00000490751 ARF1P84077 181 aaKnown RBP27.37■■□□□ 1.97
LDB1-204ENST00000490751 POU3F1Q03052 451 aaPredicted RBP27.37■■□□□ 1.97
LDB1-204ENST00000490751 ZNF544Q6NX49 715 aa27.37■■□□□ 1.97
LDB1-204ENST00000490751 LINC00114Q6XXX2 140 aa27.37■■□□□ 1.97
LDB1-204ENST00000490751 TUBA1AQ71U36 451 aa27.37■■□□□ 1.97
LDB1-204ENST00000490751 CCDC80Q76M96 950 aa27.37■■□□□ 1.97
LDB1-204ENST00000490751 SNX32Q86XE0 403 aa27.37■■□□□ 1.97
LDB1-204ENST00000490751 CALHM3Q86XJ0 350 aa27.37■■□□□ 1.97
LDB1-204ENST00000490751 TMEM123Q8N131 208 aa27.37■■□□□ 1.97
LDB1-204ENST00000490751 ADAMTS16Q8TE57 1224 aa27.37■■□□□ 1.97
LDB1-204ENST00000490751 ECSITQ9BQ95 431 aa27.37■■□□□ 1.97
LDB1-204ENST00000490751 BARX1Q9HBU1 254 aaPredicted RBP27.37■■□□□ 1.97
LDB1-204ENST00000490751 GPR35Q9HC97 309 aa27.37■■□□□ 1.97
LDB1-204ENST00000490751 MOKQ9UQ07 419 aa27.37■■□□□ 1.97
LDB1-204ENST00000490751 NSD1Q96L73 2696 aaPredicted RBP27.37■■□□□ 1.97
LDB1-204ENST00000490751 ARPC4-TTLL3A0A0A6YYG9 625 aa27.36■■□□□ 1.97
LDB1-204ENST00000490751 IGHV1-18A0A0C4DH31 117 aa27.36■■□□□ 1.97
LDB1-204ENST00000490751 THY1P04216 161 aa27.36■■□□□ 1.97
LDB1-204ENST00000490751 PUDPQ08623 228 aa27.36■■□□□ 1.97
LDB1-204ENST00000490751 HSP90B2PQ58FF3 399 aa27.36■■□□□ 1.97
LDB1-204ENST00000490751 WDR88Q6ZMY6 472 aa27.36■■□□□ 1.97
LDB1-204ENST00000490751 TSPYL5Q86VY4 417 aaPredicted RBP27.36■■□□□ 1.97
LDB1-204ENST00000490751 RASSF5Q8WWW0 418 aa27.36■■□□□ 1.97
LDB1-204ENST00000490751 SLC38A2Q96QD8 506 aa27.36■■□□□ 1.97
LDB1-204ENST00000490751 EMC6Q9BV81 110 aa27.36■■□□□ 1.97
LDB1-204ENST00000490751 CCDC134Q9H6E4 229 aa27.36■■□□□ 1.97
LDB1-204ENST00000490751 LYPD3O95274 346 aa27.35■■□□□ 1.97
LDB1-204ENST00000490751 NPPAP01160 153 aa27.35■■□□□ 1.97
LDB1-204ENST00000490751 CEACAM16Q2WEN9 425 aa27.35■■□□□ 1.97
LDB1-204ENST00000490751 CARD17Q5XLA6 110 aa27.35■■□□□ 1.97
LDB1-204ENST00000490751 ZNF837Q96EG3 531 aaPredicted RBP27.35■■□□□ 1.97
LDB1-204ENST00000490751 ADAD1Q96M93 576 aaKnown RBP27.35■■□□□ 1.97
LDB1-204ENST00000490751 CRLF2Q9HC73 371 aa27.35■■□□□ 1.97
LDB1-204ENST00000490751 LOC100653049A0A140TA62 436 aa27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms