RNA–Protein interactions for RNA: ENST00000490398.5

COL9A3-214, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-214ENST00000490398 EPYCQ99645 322 aa15.88■□□□□ 0.13
COL9A3-214ENST00000490398 NELFAQ9H3P2 528 aa15.88■□□□□ 0.13
COL9A3-214ENST00000490398 EFCAB1Q9HAE3 211 aa15.88■□□□□ 0.13
COL9A3-214ENST00000490398 NGBQ9NPG2 151 aa15.88■□□□□ 0.13
COL9A3-214ENST00000490398 MEPEQ9NQ76 525 aaPredicted RBP15.88■□□□□ 0.13
COL9A3-214ENST00000490398 MED29Q9NX70 200 aa15.88■□□□□ 0.13
COL9A3-214ENST00000490398 MRPL39Q9NYK5 338 aaKnown RBP15.88■□□□□ 0.13
COL9A3-214ENST00000490398 BAG5Q9UL15 447 aa15.88■□□□□ 0.13
COL9A3-214ENST00000490398 SNX13Q9Y5W8 968 aa15.88■□□□□ 0.13
COL9A3-214ENST00000490398 CADP27708 2225 aa15.88■□□□□ 0.13
COL9A3-214ENST00000490398 MTORP42345 2549 aa15.88■□□□□ 0.13
COL9A3-214ENST00000490398 ACANP16112 2415 aa15.87■□□□□ 0.13
COL9A3-214ENST00000490398 LOC102725191A0A1B0GVB3 256 aa15.87■□□□□ 0.13
COL9A3-214ENST00000490398 ABCD4O14678 606 aa15.87■□□□□ 0.13
COL9A3-214ENST00000490398 SERPINI2O75830 405 aa15.87■□□□□ 0.13
COL9A3-214ENST00000490398 SOD3P08294 240 aa15.87■□□□□ 0.13
COL9A3-214ENST00000490398 DANCRP0C864 163 aa15.87■□□□□ 0.13
COL9A3-214ENST00000490398 NQO1P15559 274 aaKnown RBP15.87■□□□□ 0.13
COL9A3-214ENST00000490398 UGT2B15P54855 530 aa15.87■□□□□ 0.13
COL9A3-214ENST00000490398 PSME3P61289 254 aa15.87■□□□□ 0.13
COL9A3-214ENST00000490398 TUBA1BP68363 451 aa15.87■□□□□ 0.13
COL9A3-214ENST00000490398 TUBA4AP68366 448 aa15.87■□□□□ 0.13
COL9A3-214ENST00000490398 NKX6-1P78426 367 aaPredicted RBP15.87■□□□□ 0.13
COL9A3-214ENST00000490398 ZNF672Q499Z4 452 aaPredicted RBP15.87■□□□□ 0.13
COL9A3-214ENST00000490398 CARD17Q5XLA6 110 aa15.87■□□□□ 0.13
COL9A3-214ENST00000490398 OR7E24Q6IFN5 339 aa15.87■□□□□ 0.13
COL9A3-214ENST00000490398 TTC33Q6PID6 262 aaPredicted RBP15.87■□□□□ 0.13
COL9A3-214ENST00000490398 HACD2Q6Y1H2 254 aa15.87■□□□□ 0.13
COL9A3-214ENST00000490398 TUBA1AQ71U36 451 aa15.87■□□□□ 0.13
COL9A3-214ENST00000490398 PIGWQ7Z7B1 504 aa15.87■□□□□ 0.13
COL9A3-214ENST00000490398 TMEM255BQ8WV15 326 aa15.87■□□□□ 0.13
COL9A3-214ENST00000490398 BCL2L2Q92843 193 aaPredicted RBP15.87■□□□□ 0.13
COL9A3-214ENST00000490398 PERPQ96FX8 193 aa15.87■□□□□ 0.13
COL9A3-214ENST00000490398 HOPXQ9BPY8 73 aaPredicted RBP15.87■□□□□ 0.13
COL9A3-214ENST00000490398 ASPNQ9BXN1 380 aa15.87■□□□□ 0.13
COL9A3-214ENST00000490398 RIMS3Q9UJD0 308 aa15.87■□□□□ 0.13
COL9A3-214ENST00000490398 RCE1Q9Y256 329 aa15.87■□□□□ 0.13
COL9A3-214ENST00000490398 FLNAP21333 2647 aaKnown RBP15.87■□□□□ 0.13
COL9A3-214ENST00000490398 M0R1B8 84 aa15.86■□□□□ 0.13
COL9A3-214ENST00000490398 CXCR6O00574 342 aa15.86■□□□□ 0.13
COL9A3-214ENST00000490398 SMPD2O60906 423 aa15.86■□□□□ 0.13
COL9A3-214ENST00000490398 KRT33AO76009 404 aa15.86■□□□□ 0.13
COL9A3-214ENST00000490398 NCK1P16333 377 aa15.86■□□□□ 0.13
COL9A3-214ENST00000490398 YAP1P46937 504 aaKnown RBP15.86■□□□□ 0.13
COL9A3-214ENST00000490398 TAS2R41P59536 307 aa15.86■□□□□ 0.13
COL9A3-214ENST00000490398 SELENOWP63302 87 aa15.86■□□□□ 0.13
COL9A3-214ENST00000490398 ROR2Q01974 943 aaKnown RBP15.86■□□□□ 0.13
COL9A3-214ENST00000490398 POU3F1Q03052 451 aaPredicted RBP15.86■□□□□ 0.13
COL9A3-214ENST00000490398 B3GLCTQ6Y288 498 aa15.86■□□□□ 0.13
COL9A3-214ENST00000490398 SLC46A3Q7Z3Q1 461 aa15.86■□□□□ 0.13
COL9A3-214ENST00000490398 ARPINQ7Z6K5 226 aa15.86■□□□□ 0.13
COL9A3-214ENST00000490398 UEVLDQ8IX04 471 aa15.86■□□□□ 0.13
COL9A3-214ENST00000490398 SCAIQ8N9R8 606 aa15.86■□□□□ 0.13
COL9A3-214ENST00000490398 RBM15BQ8NDT2 890 aaKnown RBP15.86■□□□□ 0.13
COL9A3-214ENST00000490398 C1orf162Q8NEQ5 155 aaPredicted RBP15.86■□□□□ 0.13
COL9A3-214ENST00000490398 OR5J2Q8NH18 312 aa15.86■□□□□ 0.13
COL9A3-214ENST00000490398 PIGTQ969N2 578 aa15.86■□□□□ 0.13
COL9A3-214ENST00000490398 PIP5K1AQ99755 562 aa15.86■□□□□ 0.13
COL9A3-214ENST00000490398 LINC00470Q9BZP3 86 aa15.86■□□□□ 0.13
COL9A3-214ENST00000490398 NSRP1Q9H0G5 558 aaKnown RBP15.86■□□□□ 0.13
COL9A3-214ENST00000490398 TAS2R5Q9NYW4 299 aa15.86■□□□□ 0.13
COL9A3-214ENST00000490398 A4GNTQ9UNA3 340 aa15.86■□□□□ 0.13
COL9A3-214ENST00000490398 LAMP3Q9UQV4 416 aa15.86■□□□□ 0.13
COL9A3-214ENST00000490398 CORINQ9Y5Q5 1042 aa15.86■□□□□ 0.13
COL9A3-214ENST00000490398 A0A096LPE4 126 aa15.85■□□□□ 0.13
COL9A3-214ENST00000490398 A0A1W2PPZ6 126 aa15.85■□□□□ 0.13
COL9A3-214ENST00000490398 SLC35F4A4IF30 521 aa15.85■□□□□ 0.13
COL9A3-214ENST00000490398 ZNF587BE7ETH6 402 aa15.85■□□□□ 0.13
COL9A3-214ENST00000490398 C11orf98E9PRG8 122 aa15.85■□□□□ 0.13
COL9A3-214ENST00000490398 J3KTA2 159 aa15.85■□□□□ 0.13
COL9A3-214ENST00000490398 SLC43A1O75387 559 aa15.85■□□□□ 0.13
COL9A3-214ENST00000490398 SEC14L2O76054 403 aa15.85■□□□□ 0.13
COL9A3-214ENST00000490398 OR5F1O95221 314 aa15.85■□□□□ 0.13
COL9A3-214ENST00000490398 CD40P25942 277 aa15.85■□□□□ 0.13
COL9A3-214ENST00000490398 ARF1P84077 181 aaKnown RBP15.85■□□□□ 0.13
COL9A3-214ENST00000490398 PUDPQ08623 228 aa15.85■□□□□ 0.13
COL9A3-214ENST00000490398 MFSD13AQ14CX5 517 aa15.85■□□□□ 0.13
COL9A3-214ENST00000490398 PGGHGQ32M88 737 aa15.85■□□□□ 0.13
COL9A3-214ENST00000490398 TBRG1Q3YBR2 411 aa15.85■□□□□ 0.13
COL9A3-214ENST00000490398 PIAS4Q8N2W9 510 aaPredicted RBP15.85■□□□□ 0.13
COL9A3-214ENST00000490398 C17orf78Q8N4C9 275 aa15.85■□□□□ 0.13
COL9A3-214ENST00000490398 MPP4Q96JB8 637 aa15.85■□□□□ 0.13
COL9A3-214ENST00000490398 ALG2Q9H553 416 aa15.85■□□□□ 0.13
COL9A3-214ENST00000490398 GPR35Q9HC97 309 aa15.85■□□□□ 0.13
COL9A3-214ENST00000490398 C20orf141Q9NUB4 165 aa15.85■□□□□ 0.13
COL9A3-214ENST00000490398 ARL8BQ9NVJ2 186 aa15.85■□□□□ 0.13
COL9A3-214ENST00000490398 ABCD2Q9UBJ2 740 aa15.85■□□□□ 0.13
COL9A3-214ENST00000490398 MAGED1Q9Y5V3 778 aaPredicted RBP15.85■□□□□ 0.13
COL9A3-214ENST00000490398 MED13LQ71F56 2210 aa15.84■□□□□ 0.13
COL9A3-214ENST00000490398 NF1P21359 2839 aa15.84■□□□□ 0.13
COL9A3-214ENST00000490398 DSCAMO60469 2012 aa15.84■□□□□ 0.13
COL9A3-214ENST00000490398 ZNF503-AS2A6NEH8 195 aa15.84■□□□□ 0.13
COL9A3-214ENST00000490398 E7EQL1 145 aa15.84■□□□□ 0.13
COL9A3-214ENST00000490398 M0R3G1 203 aa15.84■□□□□ 0.13
COL9A3-214ENST00000490398 PIP5K1CO60331 668 aa15.84■□□□□ 0.13
COL9A3-214ENST00000490398 MT-ATP6P00846 226 aa15.84■□□□□ 0.13
COL9A3-214ENST00000490398 ADORA3P0DMS8 318 aa15.84■□□□□ 0.13
COL9A3-214ENST00000490398 CD99P14209 185 aa15.84■□□□□ 0.13
COL9A3-214ENST00000490398 AHCYP23526 432 aa15.84■□□□□ 0.13
COL9A3-214ENST00000490398 PRDX6P30041 224 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms