RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 MS4A4EQ96PG1 132 aa5.95□□□□□ -1.46
PDLIM1-203ENST00000490391 TSPAN32Q96QS1 320 aa5.95□□□□□ -1.46
PDLIM1-203ENST00000490391 CPNE1Q99829 537 aa5.95□□□□□ -1.46
PDLIM1-203ENST00000490391 HOXD1Q9GZZ0 328 aa5.95□□□□□ -1.46
PDLIM1-203ENST00000490391 DUSP22Q9NRW4 184 aa5.95□□□□□ -1.46
PDLIM1-203ENST00000490391 SIRT5Q9NXA8 310 aa5.95□□□□□ -1.46
PDLIM1-203ENST00000490391 TAAR3PQ9P1P4 343 aa5.95□□□□□ -1.46
PDLIM1-203ENST00000490391 CPSF2Q9P2I0 782 aaKnown RBP5.95□□□□□ -1.46
PDLIM1-203ENST00000490391 DUSP13Q9UII6 198 aa5.95□□□□□ -1.46
PDLIM1-203ENST00000490391 KCNE5Q9UJ90 142 aa5.95□□□□□ -1.46
PDLIM1-203ENST00000490391 SNX6Q9UNH7 406 aa5.95□□□□□ -1.46
PDLIM1-203ENST00000490391 PCDHGB5Q9Y5G0 923 aa5.95□□□□□ -1.46
PDLIM1-203ENST00000490391 SPIN1Q9Y657 262 aaPredicted RBP5.95□□□□□ -1.46
PDLIM1-203ENST00000490391 KMT2AQ03164 3969 aa5.94□□□□□ -1.46
PDLIM1-203ENST00000490391 CENPVL1A0A0U1RR11 272 aa5.94□□□□□ -1.46
PDLIM1-203ENST00000490391 ISPDA4D126 451 aa5.94□□□□□ -1.46
PDLIM1-203ENST00000490391 E7ESA3 106 aa5.94□□□□□ -1.46
PDLIM1-203ENST00000490391 F5H0A9 414 aaPredicted RBP5.94□□□□□ -1.46
PDLIM1-203ENST00000490391 GOLGA6L22H0YM25 854 aa5.94□□□□□ -1.46
PDLIM1-203ENST00000490391 RPL36A-HNRNPH2H7BZ11 118 aa5.94□□□□□ -1.46
PDLIM1-203ENST00000490391 MANBAO00462 879 aa5.94□□□□□ -1.46
PDLIM1-203ENST00000490391 EREGO14944 169 aa5.94□□□□□ -1.46
PDLIM1-203ENST00000490391 TSPAN9O75954 239 aa5.94□□□□□ -1.46
PDLIM1-203ENST00000490391 ZNF432O94892 652 aa5.94□□□□□ -1.46
PDLIM1-203ENST00000490391 UBOX5O94941 541 aa5.94□□□□□ -1.46
PDLIM1-203ENST00000490391 IGHV2-70P01814 119 aa5.94□□□□□ -1.46
PDLIM1-203ENST00000490391 RPS17P08708 135 aaKnown RBP5.94□□□□□ -1.46
PDLIM1-203ENST00000490391 ANXA4P09525 319 aaPredicted RBP5.94□□□□□ -1.46
PDLIM1-203ENST00000490391 ALOX5P09917 674 aa5.94□□□□□ -1.46
PDLIM1-203ENST00000490391 P2RY4P51582 365 aa5.94□□□□□ -1.46
PDLIM1-203ENST00000490391 PRKAG1P54619 331 aa5.94□□□□□ -1.46
PDLIM1-203ENST00000490391 RPS23P62266 143 aaKnown RBP5.94□□□□□ -1.46
PDLIM1-203ENST00000490391 SLC35A1P78382 337 aa5.94□□□□□ -1.46
PDLIM1-203ENST00000490391 ROR2Q01974 943 aaKnown RBP5.94□□□□□ -1.46
PDLIM1-203ENST00000490391 EGR3Q06889 387 aa5.94□□□□□ -1.46
PDLIM1-203ENST00000490391 ACSM2AQ08AH3 577 aa5.94□□□□□ -1.46
PDLIM1-203ENST00000490391 ZNF763Q0D2J5 394 aa5.94□□□□□ -1.46
PDLIM1-203ENST00000490391 ACSM2BQ68CK6 577 aa5.94□□□□□ -1.46
PDLIM1-203ENST00000490391 CDC73Q6P1J9 531 aa5.94□□□□□ -1.46
PDLIM1-203ENST00000490391 TMEM154Q6P9G4 183 aa5.94□□□□□ -1.46
PDLIM1-203ENST00000490391 ZCCHC12Q6PEW1 402 aa5.94□□□□□ -1.46
PDLIM1-203ENST00000490391 RAPH1Q70E73 1250 aa5.94□□□□□ -1.46
PDLIM1-203ENST00000490391 TMEM99Q8N816 258 aa5.94□□□□□ -1.46
PDLIM1-203ENST00000490391 TMEM234Q8WY98 164 aa5.94□□□□□ -1.46
PDLIM1-203ENST00000490391 CFHR4Q92496 578 aa5.94□□□□□ -1.46
PDLIM1-203ENST00000490391 CDS1Q92903 461 aa5.94□□□□□ -1.46
PDLIM1-203ENST00000490391 FAM71F1Q96KD3 344 aaPredicted RBP5.94□□□□□ -1.46
PDLIM1-203ENST00000490391 STACQ99469 402 aa5.94□□□□□ -1.46
PDLIM1-203ENST00000490391 SF3B5Q9BWJ5 86 aaKnown RBP5.94□□□□□ -1.46
PDLIM1-203ENST00000490391 LINC00470Q9BZP3 86 aa5.94□□□□□ -1.46
PDLIM1-203ENST00000490391 TRIM5Q9C035 493 aa5.94□□□□□ -1.46
PDLIM1-203ENST00000490391 TOR3AQ9H497 397 aa5.94□□□□□ -1.46
PDLIM1-203ENST00000490391 PIF1Q9H611 641 aa5.94□□□□□ -1.46
PDLIM1-203ENST00000490391 PATZ1Q9HBE1 687 aaKnown RBP5.94□□□□□ -1.46
PDLIM1-203ENST00000490391 MIEF1Q9NQG6 463 aa5.94□□□□□ -1.46
PDLIM1-203ENST00000490391 DCAF16Q9NXF7 216 aa5.94□□□□□ -1.46
PDLIM1-203ENST00000490391 NFU1Q9UMS0 254 aa5.94□□□□□ -1.46
PDLIM1-203ENST00000490391 A0A096LPK6 155 aa5.93□□□□□ -1.46
PDLIM1-203ENST00000490391 ZC3H12DA2A288 527 aaKnown RBP5.93□□□□□ -1.46
PDLIM1-203ENST00000490391 FAM159BA6NKW6 160 aa5.93□□□□□ -1.46
PDLIM1-203ENST00000490391 AQP7P3A6NL99 342 aa5.93□□□□□ -1.46
PDLIM1-203ENST00000490391 STX16-NPEPL1H3BU86 382 aa5.93□□□□□ -1.46
PDLIM1-203ENST00000490391 STX16O14662 325 aa5.93□□□□□ -1.46
PDLIM1-203ENST00000490391 ANKRD28O15084 1053 aa5.93□□□□□ -1.46
PDLIM1-203ENST00000490391 MGRN1O60291 552 aa5.93□□□□□ -1.46
PDLIM1-203ENST00000490391 BCAS1O75363 584 aaPredicted RBP5.93□□□□□ -1.46
PDLIM1-203ENST00000490391 KRT33AO76009 404 aa5.93□□□□□ -1.46
PDLIM1-203ENST00000490391 OR4F21O95013 312 aa5.93□□□□□ -1.46
PDLIM1-203ENST00000490391 IGHV4-59P01825 116 aa5.93□□□□□ -1.46
PDLIM1-203ENST00000490391 HLA-HP01893 362 aa5.93□□□□□ -1.46
PDLIM1-203ENST00000490391 ZNF250P15622 560 aa5.93□□□□□ -1.46
PDLIM1-203ENST00000490391 TSPAN8P19075 237 aa5.93□□□□□ -1.46
PDLIM1-203ENST00000490391 ATP6V1C1P21283 382 aa5.93□□□□□ -1.46
PDLIM1-203ENST00000490391 FKBP2P26885 142 aaKnown RBP5.93□□□□□ -1.46
PDLIM1-203ENST00000490391 CRABP2P29373 138 aa5.93□□□□□ -1.46
PDLIM1-203ENST00000490391 FNTAP49354 379 aa5.93□□□□□ -1.46
PDLIM1-203ENST00000490391 HTR6P50406 440 aa5.93□□□□□ -1.46
PDLIM1-203ENST00000490391 HERPUD1Q15011 391 aa5.93□□□□□ -1.46
PDLIM1-203ENST00000490391 DCST2Q5T1A1 773 aa5.93□□□□□ -1.46
PDLIM1-203ENST00000490391 PDZK1Q5T2W1 519 aa5.93□□□□□ -1.46
PDLIM1-203ENST00000490391 CREB3L2Q70SY1 520 aa5.93□□□□□ -1.46
PDLIM1-203ENST00000490391 GRINAQ7Z429 371 aa5.93□□□□□ -1.46
PDLIM1-203ENST00000490391 EPHX4Q8IUS5 362 aa5.93□□□□□ -1.46
PDLIM1-203ENST00000490391 CMIPQ8IY22 773 aa5.93□□□□□ -1.46
PDLIM1-203ENST00000490391 C1orf174Q8IYL3 243 aa5.93□□□□□ -1.46
PDLIM1-203ENST00000490391 ZNF614Q8N883 585 aa5.93□□□□□ -1.46
PDLIM1-203ENST00000490391 FAM71CQ8NEG0 241 aa5.93□□□□□ -1.46
PDLIM1-203ENST00000490391 CDC26Q8NHZ8 85 aa5.93□□□□□ -1.46
PDLIM1-203ENST00000490391 KIF18AQ8NI77 898 aa5.93□□□□□ -1.46
PDLIM1-203ENST00000490391 ZNF483Q8TF39 744 aaPredicted RBP5.93□□□□□ -1.46
PDLIM1-203ENST00000490391 CCL17Q92583 94 aa5.93□□□□□ -1.46
PDLIM1-203ENST00000490391 CIDECQ96AQ7 238 aaPredicted RBP5.93□□□□□ -1.46
PDLIM1-203ENST00000490391 PHF21BQ96EK2 531 aa5.93□□□□□ -1.46
PDLIM1-203ENST00000490391 ELMOD3Q96FG2 381 aa5.93□□□□□ -1.46
PDLIM1-203ENST00000490391 MS4A14Q96JA4 679 aa5.93□□□□□ -1.46
PDLIM1-203ENST00000490391 NAA11Q9BSU3 229 aaPredicted RBP5.93□□□□□ -1.46
PDLIM1-203ENST00000490391 NMUR2Q9GZQ4 415 aa5.93□□□□□ -1.46
PDLIM1-203ENST00000490391 PIGUQ9H490 435 aa5.93□□□□□ -1.46
PDLIM1-203ENST00000490391 SERHL2Q9H4I8 314 aa5.93□□□□□ -1.46
PDLIM1-203ENST00000490391 SAP30LQ9HAJ7 183 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms