RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 SMAD7O15105 426 aaKnown RBP15.28■□□□□ 0.04
SEC13-218ENST00000490283 TPST2O60704 377 aa15.28■□□□□ 0.04
SEC13-218ENST00000490283 UPK3AO75631 287 aa15.28■□□□□ 0.04
SEC13-218ENST00000490283 KRT34O76011 436 aa15.28■□□□□ 0.04
SEC13-218ENST00000490283 PTNP21246 168 aa15.28■□□□□ 0.04
SEC13-218ENST00000490283 CDKN1AP38936 164 aa15.28■□□□□ 0.04
SEC13-218ENST00000490283 PUDPQ08623 228 aa15.28■□□□□ 0.04
SEC13-218ENST00000490283 TBRG1Q3YBR2 411 aa15.28■□□□□ 0.04
SEC13-218ENST00000490283 CGB2Q6NT52 195 aa15.28■□□□□ 0.04
SEC13-218ENST00000490283 ANKRD16Q6P6B7 361 aa15.28■□□□□ 0.04
SEC13-218ENST00000490283 TTC33Q6PID6 262 aaPredicted RBP15.28■□□□□ 0.04
SEC13-218ENST00000490283 CCDC80Q76M96 950 aa15.28■□□□□ 0.04
SEC13-218ENST00000490283 DTX2Q86UW9 622 aa15.28■□□□□ 0.04
SEC13-218ENST00000490283 ANKK1Q8NFD2 765 aa15.28■□□□□ 0.04
SEC13-218ENST00000490283 TAMM41Q96BW9 452 aa15.28■□□□□ 0.04
SEC13-218ENST00000490283 BOD1Q96IK1 185 aa15.28■□□□□ 0.04
SEC13-218ENST00000490283 DHRS9Q9BPW9 319 aa15.28■□□□□ 0.04
SEC13-218ENST00000490283 WFDC6Q9BQY6 131 aa15.28■□□□□ 0.04
SEC13-218ENST00000490283 TRAF4Q9BUZ4 470 aaPredicted RBP15.28■□□□□ 0.04
SEC13-218ENST00000490283 GRIP2Q9C0E4 1043 aa15.28■□□□□ 0.04
SEC13-218ENST00000490283 B3GAT2Q9NPZ5 323 aa15.28■□□□□ 0.04
SEC13-218ENST00000490283 MRPL39Q9NYK5 338 aaKnown RBP15.28■□□□□ 0.04
SEC13-218ENST00000490283 B3GAT1Q9P2W7 334 aa15.28■□□□□ 0.04
SEC13-218ENST00000490283 BAG5Q9UL15 447 aa15.28■□□□□ 0.04
SEC13-218ENST00000490283 NOX1Q9Y5S8 564 aa15.28■□□□□ 0.04
SEC13-218ENST00000490283 ACANP16112 2415 aa15.27■□□□□ 0.04
SEC13-218ENST00000490283 TRIM64A6NGJ6 449 aa15.27■□□□□ 0.04
SEC13-218ENST00000490283 TRIM64BA6NI03 449 aa15.27■□□□□ 0.04
SEC13-218ENST00000490283 OR6A2O95222 327 aa15.27■□□□□ 0.04
SEC13-218ENST00000490283 BGLAPP02818 100 aa15.27■□□□□ 0.04
SEC13-218ENST00000490283 BMP4P12644 408 aa15.27■□□□□ 0.04
SEC13-218ENST00000490283 HOXB1P14653 301 aaPredicted RBP15.27■□□□□ 0.04
SEC13-218ENST00000490283 MDH1P40925 334 aaKnown RBP15.27■□□□□ 0.04
SEC13-218ENST00000490283 FABP6P51161 128 aa15.27■□□□□ 0.04
SEC13-218ENST00000490283 SLC25A3Q00325 362 aa15.27■□□□□ 0.04
SEC13-218ENST00000490283 POU3F1Q03052 451 aaPredicted RBP15.27■□□□□ 0.04
SEC13-218ENST00000490283 LGALS3BPQ08380 585 aa15.27■□□□□ 0.04
SEC13-218ENST00000490283 SPOCK1Q08629 439 aa15.27■□□□□ 0.04
SEC13-218ENST00000490283 VEZF1Q14119 521 aa15.27■□□□□ 0.04
SEC13-218ENST00000490283 ZNF544Q6NX49 715 aa15.27■□□□□ 0.04
SEC13-218ENST00000490283 ADAMTS16Q8TE57 1224 aa15.27■□□□□ 0.04
SEC13-218ENST00000490283 SLC41A3Q96GZ6 507 aa15.27■□□□□ 0.04
SEC13-218ENST00000490283 MPP4Q96JB8 637 aa15.27■□□□□ 0.04
SEC13-218ENST00000490283 ADAD1Q96M93 576 aaKnown RBP15.27■□□□□ 0.04
SEC13-218ENST00000490283 SLC7A7Q9UM01 511 aa15.27■□□□□ 0.04
SEC13-218ENST00000490283 MAP1AP78559 2803 aaPredicted RBP15.27■□□□□ 0.03
SEC13-218ENST00000490283 ZNF726A6NNF4 738 aa15.26■□□□□ 0.03
SEC13-218ENST00000490283 E7EQL1 145 aa15.26■□□□□ 0.03
SEC13-218ENST00000490283 RPL36A-HNRNPH2H7BZ11 118 aa15.26■□□□□ 0.03
SEC13-218ENST00000490283 FXYD1O00168 92 aa15.26■□□□□ 0.03
SEC13-218ENST00000490283 TRAF3IP2O43734 574 aaPredicted RBP15.26■□□□□ 0.03
SEC13-218ENST00000490283 CCDC22O60826 627 aa15.26■□□□□ 0.03
SEC13-218ENST00000490283 AHCYP23526 432 aa15.26■□□□□ 0.03
SEC13-218ENST00000490283 TTKP33981 857 aa15.26■□□□□ 0.03
SEC13-218ENST00000490283 GZMMP51124 257 aa15.26■□□□□ 0.03
SEC13-218ENST00000490283 NPTX1Q15818 432 aa15.26■□□□□ 0.03
SEC13-218ENST00000490283 CLEC12BQ2HXU8 276 aa15.26■□□□□ 0.03
SEC13-218ENST00000490283 ARPINQ7Z6K5 226 aa15.26■□□□□ 0.03
SEC13-218ENST00000490283 CALHM3Q86XJ0 350 aa15.26■□□□□ 0.03
SEC13-218ENST00000490283 MUC15Q8N387 334 aa15.26■□□□□ 0.03
SEC13-218ENST00000490283 OR5J2Q8NH18 312 aa15.26■□□□□ 0.03
SEC13-218ENST00000490283 MAGEE2Q8TD90 523 aaPredicted RBP15.26■□□□□ 0.03
SEC13-218ENST00000490283 BCL2L2Q92843 193 aaPredicted RBP15.26■□□□□ 0.03
SEC13-218ENST00000490283 MOGAT1Q96PD6 335 aa15.26■□□□□ 0.03
SEC13-218ENST00000490283 OR2M2Q96R28 347 aa15.26■□□□□ 0.03
SEC13-218ENST00000490283 SMR3AQ99954 134 aa15.26■□□□□ 0.03
SEC13-218ENST00000490283 CBLN4Q9NTU7 201 aa15.26■□□□□ 0.03
SEC13-218ENST00000490283 AP3M1Q9Y2T2 418 aa15.26■□□□□ 0.03
SEC13-218ENST00000490283 SH3GLB1Q9Y371 365 aa15.26■□□□□ 0.03
SEC13-218ENST00000490283 A0A096LPE4 126 aa15.25■□□□□ 0.03
SEC13-218ENST00000490283 ARPC4-TTLL3A0A0A6YYG9 625 aa15.25■□□□□ 0.03
SEC13-218ENST00000490283 A0A1W2PPZ6 126 aa15.25■□□□□ 0.03
SEC13-218ENST00000490283 SERPINI2O75830 405 aa15.25■□□□□ 0.03
SEC13-218ENST00000490283 ZNF432O94892 652 aa15.25■□□□□ 0.03
SEC13-218ENST00000490283 CRYAAP02489 173 aa15.25■□□□□ 0.03
SEC13-218ENST00000490283 HIST1H2ABP04908 130 aa15.25■□□□□ 0.03
SEC13-218ENST00000490283 HEXAP06865 529 aa15.25■□□□□ 0.03
SEC13-218ENST00000490283 ADORA3P0DMS8 318 aa15.25■□□□□ 0.03
SEC13-218ENST00000490283 TAS2R41P59536 307 aa15.25■□□□□ 0.03
SEC13-218ENST00000490283 CHRNB3Q05901 458 aa15.25■□□□□ 0.03
SEC13-218ENST00000490283 CEACAM16Q2WEN9 425 aa15.25■□□□□ 0.03
SEC13-218ENST00000490283 CARD17Q5XLA6 110 aa15.25■□□□□ 0.03
SEC13-218ENST00000490283 HIST3H2AQ7L7L0 130 aa15.25■□□□□ 0.03
SEC13-218ENST00000490283 LINGO2Q7L985 606 aa15.25■□□□□ 0.03
SEC13-218ENST00000490283 PXKQ7Z7A4 578 aa15.25■□□□□ 0.03
SEC13-218ENST00000490283 RBM45Q8IUH3 476 aaKnown RBP15.25■□□□□ 0.03
SEC13-218ENST00000490283 OR2T12Q8NG77 320 aa15.25■□□□□ 0.03
SEC13-218ENST00000490283 RP9Q8TA86 221 aaKnown RBP15.25■□□□□ 0.03
SEC13-218ENST00000490283 HIST1H2ACQ93077 130 aa15.25■□□□□ 0.03
SEC13-218ENST00000490283 SLC38A2Q96QD8 506 aa15.25■□□□□ 0.03
SEC13-218ENST00000490283 SLC19A3Q9BZV2 496 aa15.25■□□□□ 0.03
SEC13-218ENST00000490283 PCDHAC1Q9H158 963 aa15.25■□□□□ 0.03
SEC13-218ENST00000490283 CRLF2Q9HC73 371 aa15.25■□□□□ 0.03
SEC13-218ENST00000490283 GPR35Q9HC97 309 aa15.25■□□□□ 0.03
SEC13-218ENST00000490283 ARMCX1Q9P291 453 aa15.25■□□□□ 0.03
SEC13-218ENST00000490283 USF3Q68DE3 2245 aa15.24■□□□□ 0.03
SEC13-218ENST00000490283 FAM220BPB1ANY3 271 aa15.24■□□□□ 0.03
SEC13-218ENST00000490283 MS4A18H0YCH9 400 aa15.24■□□□□ 0.03
SEC13-218ENST00000490283 M0R3G1 203 aa15.24■□□□□ 0.03
SEC13-218ENST00000490283 KPNA4O00629 521 aaPredicted RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms