RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 MS4A18Q3C1V0 323 aa8.48□□□□□ -1.05
TMEM39A-210ENST00000490099 ELOA3BQ3SY89 546 aa8.48□□□□□ -1.05
TMEM39A-210ENST00000490099 TBRG1Q3YBR2 411 aa8.48□□□□□ -1.05
TMEM39A-210ENST00000490099 HIKESHIQ53FT3 197 aa8.48□□□□□ -1.05
TMEM39A-210ENST00000490099 ALG10BQ5I7T1 473 aa8.48□□□□□ -1.05
TMEM39A-210ENST00000490099 C9orf135Q5VTT2 229 aa8.48□□□□□ -1.05
TMEM39A-210ENST00000490099 ANKRD16Q6P6B7 361 aa8.48□□□□□ -1.05
TMEM39A-210ENST00000490099 H1FNTQ75WM6 255 aaPredicted RBP8.48□□□□□ -1.05
TMEM39A-210ENST00000490099 ZNF627Q7L945 461 aa8.48□□□□□ -1.05
TMEM39A-210ENST00000490099 GPAT4Q86UL3 456 aa8.48□□□□□ -1.05
TMEM39A-210ENST00000490099 PRIMA1Q86XR5 153 aa8.48□□□□□ -1.05
TMEM39A-210ENST00000490099 TMEM123Q8N131 208 aa8.48□□□□□ -1.05
TMEM39A-210ENST00000490099 DEPDC4Q8N2C3 294 aa8.48□□□□□ -1.05
TMEM39A-210ENST00000490099 KDM8Q8N371 416 aa8.48□□□□□ -1.05
TMEM39A-210ENST00000490099 MUC15Q8N387 334 aa8.48□□□□□ -1.05
TMEM39A-210ENST00000490099 HIPK4Q8NE63 616 aa8.48□□□□□ -1.05
TMEM39A-210ENST00000490099 ELOA3Q8NG57 546 aa8.48□□□□□ -1.05
TMEM39A-210ENST00000490099 SLC47A1Q96FL8 570 aa8.48□□□□□ -1.05
TMEM39A-210ENST00000490099 TMEM43Q9BTV4 400 aa8.48□□□□□ -1.05
TMEM39A-210ENST00000490099 C1QTNF6Q9BXI9 259 aa8.48□□□□□ -1.05
TMEM39A-210ENST00000490099 KAT8Q9H7Z6 458 aaKnown RBP8.48□□□□□ -1.05
TMEM39A-210ENST00000490099 FKRPQ9H9S5 495 aa8.48□□□□□ -1.05
TMEM39A-210ENST00000490099 CACYBPQ9HB71 228 aaKnown RBP8.48□□□□□ -1.05
TMEM39A-210ENST00000490099 MOV10Q9HCE1 1003 aaKnown RBP8.48□□□□□ -1.05
TMEM39A-210ENST00000490099 SEC14L4Q9UDX3 406 aa8.48□□□□□ -1.05
TMEM39A-210ENST00000490099 TESQ9UGI8 421 aaKnown RBP8.48□□□□□ -1.05
TMEM39A-210ENST00000490099 LEF1Q9UJU2 399 aaPredicted RBP8.48□□□□□ -1.05
TMEM39A-210ENST00000490099 NDUFAF1Q9Y375 327 aa8.48□□□□□ -1.05
TMEM39A-210ENST00000490099 IGHV1-18A0A0C4DH31 117 aa8.47□□□□□ -1.05
TMEM39A-210ENST00000490099 ZNF587BE7ETH6 402 aa8.47□□□□□ -1.05
TMEM39A-210ENST00000490099 M0QX08 132 aa8.47□□□□□ -1.05
TMEM39A-210ENST00000490099 M0R082 166 aa8.47□□□□□ -1.05
TMEM39A-210ENST00000490099 AIM2O14862 343 aa8.47□□□□□ -1.05
TMEM39A-210ENST00000490099 WNT11O96014 354 aa8.47□□□□□ -1.05
TMEM39A-210ENST00000490099 HPRP00739 348 aa8.47□□□□□ -1.05
TMEM39A-210ENST00000490099 IGKV3-15P01624 115 aa8.47□□□□□ -1.05
TMEM39A-210ENST00000490099 BGLAPP02818 100 aa8.47□□□□□ -1.05
TMEM39A-210ENST00000490099 PTNP21246 168 aa8.47□□□□□ -1.05
TMEM39A-210ENST00000490099 DRD4P21917 467 aa8.47□□□□□ -1.05
TMEM39A-210ENST00000490099 GRPRP30550 384 aa8.47□□□□□ -1.05
TMEM39A-210ENST00000490099 APOBEC3AP31941 199 aaPredicted RBP8.47□□□□□ -1.05
TMEM39A-210ENST00000490099 CRYBA2P53672 197 aa8.47□□□□□ -1.05
TMEM39A-210ENST00000490099 SEC24CP53992 1094 aa8.47□□□□□ -1.05
TMEM39A-210ENST00000490099 DSCR9P59020 149 aa8.47□□□□□ -1.05
TMEM39A-210ENST00000490099 VEZF1Q14119 521 aa8.47□□□□□ -1.05
TMEM39A-210ENST00000490099 MFSD13AQ14CX5 517 aa8.47□□□□□ -1.05
TMEM39A-210ENST00000490099 OR1Q1Q15612 314 aa8.47□□□□□ -1.05
TMEM39A-210ENST00000490099 DUSP7Q16829 419 aa8.47□□□□□ -1.05
TMEM39A-210ENST00000490099 GKAP1Q5VSY0 366 aaPredicted RBP8.47□□□□□ -1.05
TMEM39A-210ENST00000490099 ZNF613Q6PF04 617 aa8.47□□□□□ -1.05
TMEM39A-210ENST00000490099 SPATA21Q7Z572 469 aa8.47□□□□□ -1.05
TMEM39A-210ENST00000490099 FBXL14Q8N1E6 418 aa8.47□□□□□ -1.05
TMEM39A-210ENST00000490099 SCAIQ8N9R8 606 aa8.47□□□□□ -1.05
TMEM39A-210ENST00000490099 C11orf65Q8NCR3 313 aa8.47□□□□□ -1.05
TMEM39A-210ENST00000490099 GPR32P1Q8NGA4 272 aa8.47□□□□□ -1.05
TMEM39A-210ENST00000490099 ZNF417Q8TAU3 575 aa8.47□□□□□ -1.05
TMEM39A-210ENST00000490099 SLC25A36Q96CQ1 311 aa8.47□□□□□ -1.05
TMEM39A-210ENST00000490099 LRR1Q96L50 414 aa8.47□□□□□ -1.05
TMEM39A-210ENST00000490099 ADAD1Q96M93 576 aaKnown RBP8.47□□□□□ -1.05
TMEM39A-210ENST00000490099 OR2M2Q96R28 347 aa8.47□□□□□ -1.05
TMEM39A-210ENST00000490099 ZNF607Q96SK3 696 aa8.47□□□□□ -1.05
TMEM39A-210ENST00000490099 ZNF587Q96SQ5 575 aaPredicted RBP8.47□□□□□ -1.05
TMEM39A-210ENST00000490099 CGREF1Q99674 301 aa8.47□□□□□ -1.05
TMEM39A-210ENST00000490099 ARHGDIGQ99819 225 aa8.47□□□□□ -1.05
TMEM39A-210ENST00000490099 ZNF426Q9BUY5 554 aa8.47□□□□□ -1.05
TMEM39A-210ENST00000490099 KATNB1Q9BVA0 655 aa8.47□□□□□ -1.05
TMEM39A-210ENST00000490099 CACNG6Q9BXT2 260 aa8.47□□□□□ -1.05
TMEM39A-210ENST00000490099 FAM107BQ9H098 131 aa8.47□□□□□ -1.05
TMEM39A-210ENST00000490099 PCDHAC1Q9H158 963 aa8.47□□□□□ -1.05
TMEM39A-210ENST00000490099 ALG2Q9H553 416 aa8.47□□□□□ -1.05
TMEM39A-210ENST00000490099 NPHS2Q9NP85 383 aa8.47□□□□□ -1.05
TMEM39A-210ENST00000490099 MRPL39Q9NYK5 338 aaKnown RBP8.47□□□□□ -1.05
TMEM39A-210ENST00000490099 CORINQ9Y5Q5 1042 aa8.47□□□□□ -1.05
TMEM39A-210ENST00000490099 CR1P17927 2039 aa8.47□□□□□ -1.05
TMEM39A-210ENST00000490099 YLPM1P49750 1951 aaKnown RBP8.46□□□□□ -1.05
TMEM39A-210ENST00000490099 COL6A5A8TX70 2615 aa8.46□□□□□ -1.05
TMEM39A-210ENST00000490099 IGHV4-30-2A0A087WSY4 118 aa8.46□□□□□ -1.06
TMEM39A-210ENST00000490099 INAFM1C9JVW0 142 aa8.46□□□□□ -1.06
TMEM39A-210ENST00000490099 ATP6V1G2-DDX39BF2Z307 99 aa8.46□□□□□ -1.06
TMEM39A-210ENST00000490099 NDUFAB1O14561 156 aa8.46□□□□□ -1.06
TMEM39A-210ENST00000490099 TLX2O43763 284 aaPredicted RBP8.46□□□□□ -1.06
TMEM39A-210ENST00000490099 CRLF1O75462 422 aa8.46□□□□□ -1.06
TMEM39A-210ENST00000490099 THY1P04216 161 aa8.46□□□□□ -1.06
TMEM39A-210ENST00000490099 CBR1P16152 277 aa8.46□□□□□ -1.06
TMEM39A-210ENST00000490099 ZNF43P17038 809 aa8.46□□□□□ -1.06
TMEM39A-210ENST00000490099 FABP6P51161 128 aa8.46□□□□□ -1.06
TMEM39A-210ENST00000490099 CDH12P55289 794 aa8.46□□□□□ -1.06
TMEM39A-210ENST00000490099 CLDN17P56750 224 aa8.46□□□□□ -1.06
TMEM39A-210ENST00000490099 ARF1P84077 181 aaKnown RBP8.46□□□□□ -1.06
TMEM39A-210ENST00000490099 ROR2Q01974 943 aaKnown RBP8.46□□□□□ -1.06
TMEM39A-210ENST00000490099 GABPB1Q06547 395 aaPredicted RBP8.46□□□□□ -1.06
TMEM39A-210ENST00000490099 SELPLGQ14242 412 aa8.46□□□□□ -1.06
TMEM39A-210ENST00000490099 EFNB3Q15768 340 aa8.46□□□□□ -1.06
TMEM39A-210ENST00000490099 NPTX1Q15818 432 aa8.46□□□□□ -1.06
TMEM39A-210ENST00000490099 NIPAL3Q6P499 406 aa8.46□□□□□ -1.06
TMEM39A-210ENST00000490099 CCDC80Q76M96 950 aa8.46□□□□□ -1.06
TMEM39A-210ENST00000490099 PXKQ7Z7A4 578 aa8.46□□□□□ -1.06
TMEM39A-210ENST00000490099 TSPYL5Q86VY4 417 aaPredicted RBP8.46□□□□□ -1.06
TMEM39A-210ENST00000490099 CALHM3Q86XJ0 350 aa8.46□□□□□ -1.06
TMEM39A-210ENST00000490099 ARMC8Q8IUR7 673 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms