RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 DDOQ99489 341 aa12.7□□□□□ -0.38
VPS26A-205ENST00000489656 MRPS26Q9BYN8 205 aaKnown RBP12.7□□□□□ -0.38
VPS26A-205ENST00000489656 TXNIPQ9H3M7 391 aa12.7□□□□□ -0.38
VPS26A-205ENST00000489656 CCNB1IP1Q9NPC3 277 aa12.7□□□□□ -0.38
VPS26A-205ENST00000489656 HINT3Q9NQE9 182 aaKnown RBP12.7□□□□□ -0.38
VPS26A-205ENST00000489656 CNOT2Q9NZN8 540 aaKnown RBP12.7□□□□□ -0.38
VPS26A-205ENST00000489656 DNAJC27Q9NZQ0 273 aa12.7□□□□□ -0.38
VPS26A-205ENST00000489656 PSORS1C1Q9UIG5 152 aa12.7□□□□□ -0.38
VPS26A-205ENST00000489656 ADAM18Q9Y3Q7 739 aa12.7□□□□□ -0.38
VPS26A-205ENST00000489656 GTF3C1Q12789 2109 aa12.7□□□□□ -0.38
VPS26A-205ENST00000489656 MGAQ8IWI9 3026 aa12.7□□□□□ -0.38
VPS26A-205ENST00000489656 A0A087WXM4 84 aa12.69□□□□□ -0.38
VPS26A-205ENST00000489656 AQP7P3A6NL99 342 aa12.69□□□□□ -0.38
VPS26A-205ENST00000489656 SNTNA6NMZ2 147 aa12.69□□□□□ -0.38
VPS26A-205ENST00000489656 CLCA1A8K7I4 914 aa12.69□□□□□ -0.38
VPS26A-205ENST00000489656 RNF13O43567 381 aa12.69□□□□□ -0.38
VPS26A-205ENST00000489656 SMNDC1O75940 238 aaKnown RBP eCLIP12.69□□□□□ -0.38
VPS26A-205ENST00000489656 AKR7A3O95154 331 aa12.69□□□□□ -0.38
VPS26A-205ENST00000489656 SLC2A10O95528 541 aa12.69□□□□□ -0.38
VPS26A-205ENST00000489656 ACTL6AO96019 429 aa12.69□□□□□ -0.38
VPS26A-205ENST00000489656 F13BP05160 661 aa12.69□□□□□ -0.38
VPS26A-205ENST00000489656 CELA3AP09093 270 aa12.69□□□□□ -0.38
VPS26A-205ENST00000489656 PIPP12273 146 aaPredicted RBP12.69□□□□□ -0.38
VPS26A-205ENST00000489656 HIST1H1CP16403 213 aaKnown RBP12.69□□□□□ -0.38
VPS26A-205ENST00000489656 POU3F2P20265 443 aaPredicted RBP12.69□□□□□ -0.38
VPS26A-205ENST00000489656 NOS3P29474 1203 aa12.69□□□□□ -0.38
VPS26A-205ENST00000489656 LHX2P50458 406 aa12.69□□□□□ -0.38
VPS26A-205ENST00000489656 AGFG1P52594 562 aaKnown RBP12.69□□□□□ -0.38
VPS26A-205ENST00000489656 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.69□□□□□ -0.38
VPS26A-205ENST00000489656 ITGADQ13349 1161 aa12.69□□□□□ -0.38
VPS26A-205ENST00000489656 TMED1Q13445 227 aa12.69□□□□□ -0.38
VPS26A-205ENST00000489656 BLMHQ13867 455 aa12.69□□□□□ -0.38
VPS26A-205ENST00000489656 SLC35F1Q5T1Q4 408 aa12.69□□□□□ -0.38
VPS26A-205ENST00000489656 RPUSD3Q6P087 351 aaKnown RBP12.69□□□□□ -0.38
VPS26A-205ENST00000489656 ZNF773Q6PK81 442 aa12.69□□□□□ -0.38
VPS26A-205ENST00000489656 UNQ6494/PRO21346Q6UXR6 183 aa12.69□□□□□ -0.38
VPS26A-205ENST00000489656 CXXC5Q7LFL8 322 aaKnown RBP12.69□□□□□ -0.38
VPS26A-205ENST00000489656 GID4Q8IVV7 300 aa12.69□□□□□ -0.38
VPS26A-205ENST00000489656 RFKQ969G6 155 aa12.69□□□□□ -0.38
VPS26A-205ENST00000489656 DNAJA3Q96EY1 480 aa12.69□□□□□ -0.38
VPS26A-205ENST00000489656 TSPAN32Q96QS1 320 aa12.69□□□□□ -0.38
VPS26A-205ENST00000489656 SIGLEC11Q96RL6 698 aa12.69□□□□□ -0.38
VPS26A-205ENST00000489656 MRPS18AQ9NVS2 196 aaKnown RBP12.69□□□□□ -0.38
VPS26A-205ENST00000489656 PAK1IP1Q9NWT1 392 aaPredicted RBP12.69□□□□□ -0.38
VPS26A-205ENST00000489656 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.69□□□□□ -0.38
VPS26A-205ENST00000489656 GPR52Q9Y2T5 361 aa12.69□□□□□ -0.38
VPS26A-205ENST00000489656 RPL36Q9Y3U8 105 aaKnown RBP12.69□□□□□ -0.38
VPS26A-205ENST00000489656 EFCAB10A6NFE3 127 aa12.68□□□□□ -0.38
VPS26A-205ENST00000489656 C1QTNF9BB2RNN3 333 aa12.68□□□□□ -0.38
VPS26A-205ENST00000489656 PRR23D1E9PI22 279 aaPredicted RBP12.68□□□□□ -0.38
VPS26A-205ENST00000489656 TAF4O00268 1085 aa12.68□□□□□ -0.38
VPS26A-205ENST00000489656 VAMP5O95183 116 aa12.68□□□□□ -0.38
VPS26A-205ENST00000489656 IGHG3P01860 377 aa12.68□□□□□ -0.38
VPS26A-205ENST00000489656 OPN1LWP04000 364 aa12.68□□□□□ -0.38
VPS26A-205ENST00000489656 PDGFAP04085 211 aa12.68□□□□□ -0.38
VPS26A-205ENST00000489656 C1QTNF9P0C862 333 aa12.68□□□□□ -0.38
VPS26A-205ENST00000489656 PRR23D2P0DMB1 279 aaPredicted RBP12.68□□□□□ -0.38
VPS26A-205ENST00000489656 PAICSP22234 425 aaKnown RBP12.68□□□□□ -0.38
VPS26A-205ENST00000489656 MLLT10P55197 1068 aa12.68□□□□□ -0.38
VPS26A-205ENST00000489656 CLDN20P56880 219 aa12.68□□□□□ -0.38
VPS26A-205ENST00000489656 RAC3P60763 192 aa12.68□□□□□ -0.38
VPS26A-205ENST00000489656 RPL27P61353 136 aaKnown RBP12.68□□□□□ -0.38
VPS26A-205ENST00000489656 KRR1Q13601 381 aaKnown RBP12.68□□□□□ -0.38
VPS26A-205ENST00000489656 CRMP1Q14194 572 aa12.68□□□□□ -0.38
VPS26A-205ENST00000489656 POU4F3Q15319 338 aa12.68□□□□□ -0.38
VPS26A-205ENST00000489656 INAQ16352 499 aa12.68□□□□□ -0.38
VPS26A-205ENST00000489656 RNFT1Q5M7Z0 435 aa12.68□□□□□ -0.38
VPS26A-205ENST00000489656 FAM205BPQ63HN1 556 aa12.68□□□□□ -0.38
VPS26A-205ENST00000489656 TMEM154Q6P9G4 183 aa12.68□□□□□ -0.38
VPS26A-205ENST00000489656 NHLRC1Q6VVB1 395 aa12.68□□□□□ -0.38
VPS26A-205ENST00000489656 TRILQ7L0X0 811 aa12.68□□□□□ -0.38
VPS26A-205ENST00000489656 ADCK1Q86TW2 530 aa12.68□□□□□ -0.38
VPS26A-205ENST00000489656 CPOQ8IVL8 374 aa12.68□□□□□ -0.38
VPS26A-205ENST00000489656 ARIH2OSQ8N7S6 290 aa12.68□□□□□ -0.38
VPS26A-205ENST00000489656 RBMXL3Q8N7X1 1067 aaKnown RBP12.68□□□□□ -0.38
VPS26A-205ENST00000489656 TMEM99Q8N816 258 aa12.68□□□□□ -0.38
VPS26A-205ENST00000489656 SLC37A3Q8NCC5 494 aa12.68□□□□□ -0.38
VPS26A-205ENST00000489656 LSM14AQ8ND56 463 aaKnown RBP12.68□□□□□ -0.38
VPS26A-205ENST00000489656 NPEPL1Q8NDH3 523 aa12.68□□□□□ -0.38
VPS26A-205ENST00000489656 ZNF540Q8NDQ6 660 aa12.68□□□□□ -0.38
VPS26A-205ENST00000489656 OR52E2Q8NGJ4 325 aa12.68□□□□□ -0.38
VPS26A-205ENST00000489656 OR2V1Q8NHB1 315 aa12.68□□□□□ -0.38
VPS26A-205ENST00000489656 NEIL3Q8TAT5 605 aa12.68□□□□□ -0.38
VPS26A-205ENST00000489656 ZNF519Q8TB69 540 aa12.68□□□□□ -0.38
VPS26A-205ENST00000489656 SMPDL3BQ92485 455 aa12.68□□□□□ -0.38
VPS26A-205ENST00000489656 GGHQ92820 318 aa12.68□□□□□ -0.38
VPS26A-205ENST00000489656 RASD2Q96D21 266 aa12.68□□□□□ -0.38
VPS26A-205ENST00000489656 ZHX1-C8orf76Q96EF9 292 aa12.68□□□□□ -0.38
VPS26A-205ENST00000489656 Q96M85 177 aa12.68□□□□□ -0.38
VPS26A-205ENST00000489656 NAA11Q9BSU3 229 aaPredicted RBP12.68□□□□□ -0.38
VPS26A-205ENST00000489656 NMNAT2Q9BZQ4 307 aa12.68□□□□□ -0.38
VPS26A-205ENST00000489656 SLC6A15Q9H2J7 730 aa12.68□□□□□ -0.38
VPS26A-205ENST00000489656 B3GAT1Q9P2W7 334 aa12.68□□□□□ -0.38
VPS26A-205ENST00000489656 GRHPRQ9UBQ7 328 aa12.68□□□□□ -0.38
VPS26A-205ENST00000489656 ZNF346Q9UL40 294 aaKnown RBP12.68□□□□□ -0.38
VPS26A-205ENST00000489656 RASD1Q9Y272 281 aa12.68□□□□□ -0.38
VPS26A-205ENST00000489656 NOX1Q9Y5S8 564 aa12.68□□□□□ -0.38
VPS26A-205ENST00000489656 NCOR2Q9Y618 2525 aa12.68□□□□□ -0.38
VPS26A-205ENST00000489656 ARHGAP21Q5T5U3 1957 aa12.68□□□□□ -0.38
VPS26A-205ENST00000489656 TEX13CA0A0J9YWL9 993 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms