RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 ZP4Q12836 540 aa15.27■□□□□ 0.04
MDC1-206ENST00000489540 ALKBH2Q6NS38 261 aa15.27■□□□□ 0.04
MDC1-206ENST00000489540 CYP4Z1Q86W10 505 aa15.27■□□□□ 0.04
MDC1-206ENST00000489540 FAM156AQ8NDB6 213 aa15.27■□□□□ 0.04
MDC1-206ENST00000489540 C1orf162Q8NEQ5 155 aaPredicted RBP15.27■□□□□ 0.04
MDC1-206ENST00000489540 TMEM255BQ8WV15 326 aa15.27■□□□□ 0.04
MDC1-206ENST00000489540 NINJ1Q92982 152 aa15.27■□□□□ 0.04
MDC1-206ENST00000489540 MEPEQ9NQ76 525 aaPredicted RBP15.27■□□□□ 0.04
MDC1-206ENST00000489540 ZNF587BE7ETH6 402 aa15.26■□□□□ 0.03
MDC1-206ENST00000489540 HPRP00739 348 aa15.26■□□□□ 0.03
MDC1-206ENST00000489540 ASAH2BP0C7U1 165 aa15.26■□□□□ 0.03
MDC1-206ENST00000489540 ADORA3P0DMS8 318 aa15.26■□□□□ 0.03
MDC1-206ENST00000489540 LOXP28300 417 aaPredicted RBP15.26■□□□□ 0.03
MDC1-206ENST00000489540 YAP1P46937 504 aaKnown RBP15.26■□□□□ 0.03
MDC1-206ENST00000489540 TRAM2Q15035 370 aa15.26■□□□□ 0.03
MDC1-206ENST00000489540 PPA1Q15181 289 aa15.26■□□□□ 0.03
MDC1-206ENST00000489540 GABRA6Q16445 453 aa15.26■□□□□ 0.03
MDC1-206ENST00000489540 OFCC1Q8IZS5 231 aa15.26■□□□□ 0.03
MDC1-206ENST00000489540 ARHGAP24Q8N264 748 aa15.26■□□□□ 0.03
MDC1-206ENST00000489540 C17orf78Q8N4C9 275 aa15.26■□□□□ 0.03
MDC1-206ENST00000489540 ANKK1Q8NFD2 765 aa15.26■□□□□ 0.03
MDC1-206ENST00000489540 NRGNQ92686 78 aa15.26■□□□□ 0.03
MDC1-206ENST00000489540 SGTBQ96EQ0 304 aa15.26■□□□□ 0.03
MDC1-206ENST00000489540 PLPPR2Q96GM1 343 aa15.26■□□□□ 0.03
MDC1-206ENST00000489540 ST6GALNAC2Q9UJ37 374 aa15.26■□□□□ 0.03
MDC1-206ENST00000489540 FAM32AQ9Y421 112 aaKnown RBP15.26■□□□□ 0.03
MDC1-206ENST00000489540 SNX13Q9Y5W8 968 aa15.26■□□□□ 0.03
MDC1-206ENST00000489540 CREBBPQ92793 2442 aa15.26■□□□□ 0.03
MDC1-206ENST00000489540 SPG11Q96JI7 2443 aa15.26■□□□□ 0.03
MDC1-206ENST00000489540 ENO4A6NNW6 628 aa15.26■□□□□ 0.03
MDC1-206ENST00000489540 TRAF3IP2O43734 574 aaPredicted RBP15.26■□□□□ 0.03
MDC1-206ENST00000489540 OR7A10O76100 309 aa15.26■□□□□ 0.03
MDC1-206ENST00000489540 UMPSP11172 480 aa15.26■□□□□ 0.03
MDC1-206ENST00000489540 HLA-DOBP13765 273 aa15.26■□□□□ 0.03
MDC1-206ENST00000489540 FUT1P19526 365 aa15.26■□□□□ 0.03
MDC1-206ENST00000489540 UGT2B15P54855 530 aa15.26■□□□□ 0.03
MDC1-206ENST00000489540 FOXG1P55316 489 aaPredicted RBP15.26■□□□□ 0.03
MDC1-206ENST00000489540 POU3F1Q03052 451 aaPredicted RBP15.26■□□□□ 0.03
MDC1-206ENST00000489540 FOXD4Q12950 439 aaPredicted RBP15.26■□□□□ 0.03
MDC1-206ENST00000489540 NHLRC1Q6VVB1 395 aa15.26■□□□□ 0.03
MDC1-206ENST00000489540 LRRC17Q8N6Y2 441 aa15.26■□□□□ 0.03
MDC1-206ENST00000489540 RBM15BQ8NDT2 890 aaKnown RBP15.26■□□□□ 0.03
MDC1-206ENST00000489540 PIK3C3Q8NEB9 887 aa15.26■□□□□ 0.03
MDC1-206ENST00000489540 PFN4Q8NHR9 129 aa15.26■□□□□ 0.03
MDC1-206ENST00000489540 LIPHQ8WWY8 451 aa15.26■□□□□ 0.03
MDC1-206ENST00000489540 BOD1Q96IK1 185 aa15.26■□□□□ 0.03
MDC1-206ENST00000489540 ESRP2Q9H6T0 727 aaKnown RBP15.26■□□□□ 0.03
MDC1-206ENST00000489540 TAS2R5Q9NYW4 299 aa15.26■□□□□ 0.03
MDC1-206ENST00000489540 ENPP4Q9Y6X5 453 aa15.26■□□□□ 0.03
MDC1-206ENST00000489540 ABCA4P78363 2273 aa15.25■□□□□ 0.03
MDC1-206ENST00000489540 FREM1Q5H8C1 2179 aa15.25■□□□□ 0.03
MDC1-206ENST00000489540 A0A1W2PPR1 153 aa15.25■□□□□ 0.03
MDC1-206ENST00000489540 ZNF726A6NNF4 738 aa15.25■□□□□ 0.03
MDC1-206ENST00000489540 J3KTA2 159 aa15.25■□□□□ 0.03
MDC1-206ENST00000489540 FFAR1O14842 300 aa15.25■□□□□ 0.03
MDC1-206ENST00000489540 UPK3AO75631 287 aa15.25■□□□□ 0.03
MDC1-206ENST00000489540 T-ENOLP0DO92 83 aa15.25■□□□□ 0.03
MDC1-206ENST00000489540 DNASE1P24855 282 aa15.25■□□□□ 0.03
MDC1-206ENST00000489540 C9orf135Q5VTT2 229 aa15.25■□□□□ 0.03
MDC1-206ENST00000489540 HMBOX1Q6NT76 420 aa15.25■□□□□ 0.03
MDC1-206ENST00000489540 SLC46A3Q7Z3Q1 461 aa15.25■□□□□ 0.03
MDC1-206ENST00000489540 RNF113BQ8IZP6 322 aaKnown RBP15.25■□□□□ 0.03
MDC1-206ENST00000489540 PYURFQ96I23 114 aa15.25■□□□□ 0.03
MDC1-206ENST00000489540 LRR1Q96L50 414 aa15.25■□□□□ 0.03
MDC1-206ENST00000489540 NSMCE2Q96MF7 247 aa15.25■□□□□ 0.03
MDC1-206ENST00000489540 HS3ST6Q96QI5 342 aa15.25■□□□□ 0.03
MDC1-206ENST00000489540 OR2M2Q96R28 347 aa15.25■□□□□ 0.03
MDC1-206ENST00000489540 LIME1Q9H400 295 aa15.25■□□□□ 0.03
MDC1-206ENST00000489540 ANKRD19PQ9H560 264 aa15.25■□□□□ 0.03
MDC1-206ENST00000489540 RHCGQ9UBD6 479 aa15.25■□□□□ 0.03
MDC1-206ENST00000489540 DCHS2Q6V1P9 2916 aa15.25■□□□□ 0.03
MDC1-206ENST00000489540 TEX15Q9BXT5 2789 aa15.24■□□□□ 0.03
MDC1-206ENST00000489540 SLC35F4A4IF30 521 aa15.24■□□□□ 0.03
MDC1-206ENST00000489540 C11orf98E9PRG8 122 aa15.24■□□□□ 0.03
MDC1-206ENST00000489540 RPL36A-HNRNPH2H7BZ11 118 aa15.24■□□□□ 0.03
MDC1-206ENST00000489540 RNF13O43567 381 aa15.24■□□□□ 0.03
MDC1-206ENST00000489540 ITGA2P17301 1181 aa15.24■□□□□ 0.03
MDC1-206ENST00000489540 RHCEP18577 417 aa15.24■□□□□ 0.03
MDC1-206ENST00000489540 HOXC12P31275 282 aa15.24■□□□□ 0.03
MDC1-206ENST00000489540 MSX2P35548 267 aaPredicted RBP15.24■□□□□ 0.03
MDC1-206ENST00000489540 NCMAPQ5T1S8 102 aa15.24■□□□□ 0.03
MDC1-206ENST00000489540 PAMR1Q6UXH9 720 aa15.24■□□□□ 0.03
MDC1-206ENST00000489540 TRPM8Q7Z2W7 1104 aa15.24■□□□□ 0.03
MDC1-206ENST00000489540 NANOGNBQ7Z5D8 188 aa15.24■□□□□ 0.03
MDC1-206ENST00000489540 C20orf196Q8IYI0 205 aa15.24■□□□□ 0.03
MDC1-206ENST00000489540 TMEM123Q8N131 208 aa15.24■□□□□ 0.03
MDC1-206ENST00000489540 GPR137CQ8N3F9 429 aa15.24■□□□□ 0.03
MDC1-206ENST00000489540 TXNDC15Q96J42 360 aa15.24■□□□□ 0.03
MDC1-206ENST00000489540 ADAD1Q96M93 576 aaKnown RBP15.24■□□□□ 0.03
MDC1-206ENST00000489540 TMEM204Q9BSN7 226 aa15.24■□□□□ 0.03
MDC1-206ENST00000489540 C1orf21Q9H246 121 aa15.24■□□□□ 0.03
MDC1-206ENST00000489540 NMNAT1Q9HAN9 279 aaPredicted RBP15.24■□□□□ 0.03
MDC1-206ENST00000489540 SLC17A5Q9NRA2 495 aa15.24■□□□□ 0.03
MDC1-206ENST00000489540 C20orf141Q9NUB4 165 aa15.24■□□□□ 0.03
MDC1-206ENST00000489540 MED29Q9NX70 200 aa15.24■□□□□ 0.03
MDC1-206ENST00000489540 NDUFAF4Q9P032 175 aa15.24■□□□□ 0.03
MDC1-206ENST00000489540 ITGB1BP2Q9UKP3 347 aa15.24■□□□□ 0.03
MDC1-206ENST00000489540 AMDHD2Q9Y303 409 aa15.24■□□□□ 0.03
MDC1-206ENST00000489540 SLC25A15Q9Y619 301 aa15.24■□□□□ 0.03
MDC1-206ENST00000489540 POLQO75417 2590 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms