RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 APIPQ96GX9 242 aa6.35□□□□□ -1.39
EXOSC3-206ENST00000489414 CENPNQ96H22 339 aaPredicted RBP6.35□□□□□ -1.39
EXOSC3-206ENST00000489414 FCRL1Q96LA6 429 aa6.35□□□□□ -1.39
EXOSC3-206ENST00000489414 CCDC115Q96NT0 180 aa6.35□□□□□ -1.39
EXOSC3-206ENST00000489414 AIF1LQ9BQI0 150 aa6.35□□□□□ -1.39
EXOSC3-206ENST00000489414 PITHD1Q9GZP4 211 aaPredicted RBP6.35□□□□□ -1.39
EXOSC3-206ENST00000489414 PELI2Q9HAT8 420 aa6.35□□□□□ -1.39
EXOSC3-206ENST00000489414 CA10Q9NS85 328 aa6.35□□□□□ -1.39
EXOSC3-206ENST00000489414 ZNF275Q9NSD4 429 aaPredicted RBP6.35□□□□□ -1.39
EXOSC3-206ENST00000489414 DKKL1Q9UK85 242 aa6.35□□□□□ -1.39
EXOSC3-206ENST00000489414 PCDHGB4Q9UN71 923 aa6.35□□□□□ -1.39
EXOSC3-206ENST00000489414 RNF103-CHMP3A0A140T963 221 aa6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 B4DXG7 233 aa6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 C4orf51C9J302 202 aa6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 PPIHO43447 177 aaKnown RBP6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 DENRO43583 198 aaKnown RBP6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 SLC25A17O43808 307 aa6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 PCDH7O60245 1069 aa6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 TSPAN9O75954 239 aa6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 ZNF432O94892 652 aa6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 TNFAIP8O95379 198 aa6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 UBTFL6P0CB48 400 aaPredicted RBP6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 SMIM10L1P0DMW3 83 aa6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 RAP2AP10114 183 aa6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 NCK1P16333 377 aa6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 NPPBP16860 134 aa6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 PTX3P26022 381 aaPredicted RBP6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 CHATP28329 748 aa6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 TIA1P31483 386 aaKnown RBP eCLIP6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 MAP2K3P46734 347 aa6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 RAB8AP61006 207 aa6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 RPS13P62277 151 aaKnown RBP6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 EMX1Q04741 257 aaPredicted RBP6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 ZNF763Q0D2J5 394 aa6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 SNTA1Q13424 505 aa6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 E2F2Q14209 437 aa6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 PDK3Q15120 406 aa6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 RBBP5Q15291 538 aaKnown RBP6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 ADRM1Q16186 407 aa6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 NSUN5P1Q3KNT7 163 aa6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 RUNDC3AQ59EK9 446 aa6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 LRIF1Q5T3J3 769 aa6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 INTS11Q5TA45 600 aaKnown RBP6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 CPTPQ5TA50 214 aa6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 KRT80Q6KB66 452 aa6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 ERICH5Q6P6B1 374 aa6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 TMIGD1Q6UXZ0 262 aa6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 SLC29A4Q7RTT9 530 aa6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 PAGE2Q7Z2X7 111 aa6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 AMIGO2Q86SJ2 522 aa6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 PLCZ1Q86YW0 608 aa6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 LAS2Q8IYD9 372 aa6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 LRRC56Q8IYG6 542 aaPredicted RBP6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 MICU2Q8IYU8 434 aa6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 ADGRG5Q8IZF4 528 aa6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 LILRA2Q8N149 483 aa6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 PARP8Q8N3A8 854 aa6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 C1orf52Q8N6N3 182 aaKnown RBP6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 TRIML2Q8N7C3 387 aa6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 FAM47BQ8NA70 645 aa6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 OR8J2Q8NGG1 315 aa6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 OR10A6Q8NH74 314 aa6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 SMIM10Q96HG1 83 aa6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 RCC1LQ96I51 464 aaKnown RBP6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 RNF145Q96MT1 663 aa6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 OR4K3Q96R72 315 aa6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 PANX1Q96RD7 426 aa6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 SEPHS2Q99611 448 aa6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 CIB1Q99828 191 aa6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 DUSP26Q9BV47 211 aa6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 SPATA9Q9BWV2 254 aa6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 EBPLQ9BY08 206 aa6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 SEMA6AQ9H2E6 1030 aa6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 RAD21L1Q9H4I0 556 aa6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 PIF1Q9H611 641 aa6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 GORASP2Q9H8Y8 452 aa6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 NOX4Q9NPH5 578 aa6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 VAPAQ9P0L0 249 aa6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 ZNF337Q9Y3M9 751 aa6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 AP4B1Q9Y6B7 739 aa6.34□□□□□ -1.39
EXOSC3-206ENST00000489414 IGHV3OR16-10A0A075B7F0 116 aa6.33□□□□□ -1.4
EXOSC3-206ENST00000489414 ZNF816-ZNF321PA0A0X1KG74 233 aa6.33□□□□□ -1.4
EXOSC3-206ENST00000489414 TCRBV5S2A0A599 114 aa6.33□□□□□ -1.4
EXOSC3-206ENST00000489414 CXCR6O00574 342 aa6.33□□□□□ -1.4
EXOSC3-206ENST00000489414 GNGT2O14610 69 aa6.33□□□□□ -1.4
EXOSC3-206ENST00000489414 TPST1O60507 370 aa6.33□□□□□ -1.4
EXOSC3-206ENST00000489414 PRAMEF4O60810 478 aa6.33□□□□□ -1.4
EXOSC3-206ENST00000489414 CTNSO60931 367 aa6.33□□□□□ -1.4
EXOSC3-206ENST00000489414 DUS4LO95620 317 aaKnown RBP6.33□□□□□ -1.4
EXOSC3-206ENST00000489414 LYNP07948 512 aa6.33□□□□□ -1.4
EXOSC3-206ENST00000489414 ABCB1P08183 1280 aaPredicted RBP6.33□□□□□ -1.4
EXOSC3-206ENST00000489414 MELTFP08582 738 aa6.33□□□□□ -1.4
EXOSC3-206ENST00000489414 FAM58BPP0C7Q3 252 aa6.33□□□□□ -1.4
EXOSC3-206ENST00000489414 CD22P20273 847 aa6.33□□□□□ -1.4
EXOSC3-206ENST00000489414 IGHV1-2P23083 117 aa6.33□□□□□ -1.4
EXOSC3-206ENST00000489414 BUD31P41223 144 aaPredicted RBP6.33□□□□□ -1.4
EXOSC3-206ENST00000489414 GSTM5P46439 218 aa6.33□□□□□ -1.4
EXOSC3-206ENST00000489414 VEGFCP49767 419 aa6.33□□□□□ -1.4
EXOSC3-206ENST00000489414 GAS1P54826 345 aa6.33□□□□□ -1.4
EXOSC3-206ENST00000489414 RAB38P57729 211 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms