RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 RBMY1BA6NDE4 496 aaKnown RBP9.66□□□□□ -0.86
HDAC6-233ENST00000489352 RBMY1EA6NEQ0 496 aaKnown RBP9.66□□□□□ -0.86
HDAC6-233ENST00000489352 SPRY3O43610 288 aa9.66□□□□□ -0.86
HDAC6-233ENST00000489352 SCN2BO60939 215 aa9.66□□□□□ -0.86
HDAC6-233ENST00000489352 SMIM24O75264 130 aa9.66□□□□□ -0.86
HDAC6-233ENST00000489352 TSPAN9O75954 239 aa9.66□□□□□ -0.86
HDAC6-233ENST00000489352 IGHV4-59P01825 116 aa9.66□□□□□ -0.86
HDAC6-233ENST00000489352 RBMY1DP0C7P1 496 aaKnown RBP9.66□□□□□ -0.86
HDAC6-233ENST00000489352 IMPDH2P12268 514 aa9.66□□□□□ -0.86
HDAC6-233ENST00000489352 IGLL1P15814 213 aa9.66□□□□□ -0.86
HDAC6-233ENST00000489352 ZNF14P17017 642 aaPredicted RBP9.66□□□□□ -0.86
HDAC6-233ENST00000489352 HMOX2P30519 316 aa9.66□□□□□ -0.86
HDAC6-233ENST00000489352 STX2P32856 288 aa9.66□□□□□ -0.86
HDAC6-233ENST00000489352 HTR3AP46098 478 aa9.66□□□□□ -0.86
HDAC6-233ENST00000489352 LASP1Q14847 261 aaKnown RBP9.66□□□□□ -0.86
HDAC6-233ENST00000489352 CEACAM16Q2WEN9 425 aa9.66□□□□□ -0.86
HDAC6-233ENST00000489352 GRTP1Q5TC63 336 aa9.66□□□□□ -0.86
HDAC6-233ENST00000489352 FAM71E1Q6IPT2 247 aa9.66□□□□□ -0.86
HDAC6-233ENST00000489352 C6orf89Q6UWU4 347 aa9.66□□□□□ -0.86
HDAC6-233ENST00000489352 FRRS1Q6ZNA5 592 aa9.66□□□□□ -0.86
HDAC6-233ENST00000489352 EIF3MQ7L2H7 374 aaKnown RBP9.66□□□□□ -0.86
HDAC6-233ENST00000489352 CCDC91Q7Z6B0 441 aa9.66□□□□□ -0.86
HDAC6-233ENST00000489352 ICA1LQ8NDH6 482 aa9.66□□□□□ -0.86
HDAC6-233ENST00000489352 RAB40AQ8WXH6 277 aa9.66□□□□□ -0.86
HDAC6-233ENST00000489352 SSBP3Q9BWW4 388 aaPredicted RBP9.66□□□□□ -0.86
HDAC6-233ENST00000489352 TRIM15Q9C019 465 aa9.66□□□□□ -0.86
HDAC6-233ENST00000489352 TMCO1Q9UM00 188 aa9.66□□□□□ -0.86
HDAC6-233ENST00000489352 LRCH1Q9Y2L9 728 aa9.66□□□□□ -0.86
HDAC6-233ENST00000489352 TMED7-TICAM2A0A0A6YYA0 188 aa9.65□□□□□ -0.86
HDAC6-233ENST00000489352 IGHV2-70DA0A0C4DH43 119 aa9.65□□□□□ -0.86
HDAC6-233ENST00000489352 PLSCR5A0PG75 271 aa9.65□□□□□ -0.86
HDAC6-233ENST00000489352 RPL36A-HNRNPH2H7BZ11 118 aa9.65□□□□□ -0.86
HDAC6-233ENST00000489352 DNAJA2O60884 412 aa9.65□□□□□ -0.86
HDAC6-233ENST00000489352 SLC43A1O75387 559 aa9.65□□□□□ -0.86
HDAC6-233ENST00000489352 UBOX5O94941 541 aa9.65□□□□□ -0.86
HDAC6-233ENST00000489352 OR4F21O95013 312 aa9.65□□□□□ -0.86
HDAC6-233ENST00000489352 VAMP5O95183 116 aa9.65□□□□□ -0.86
HDAC6-233ENST00000489352 IGHV2-70P01814 119 aa9.65□□□□□ -0.86
HDAC6-233ENST00000489352 HMGN2P05204 90 aaKnown RBP9.65□□□□□ -0.86
HDAC6-233ENST00000489352 LYL1P12980 280 aa9.65□□□□□ -0.86
HDAC6-233ENST00000489352 GABRA5P31644 462 aa9.65□□□□□ -0.86
HDAC6-233ENST00000489352 MSX2P35548 267 aaPredicted RBP9.65□□□□□ -0.86
HDAC6-233ENST00000489352 TGFBR2P37173 567 aa9.65□□□□□ -0.86
HDAC6-233ENST00000489352 CAMK2DQ13557 499 aa9.65□□□□□ -0.86
HDAC6-233ENST00000489352 CEACAM7Q14002 265 aa9.65□□□□□ -0.86
HDAC6-233ENST00000489352 OR7A5Q15622 319 aa9.65□□□□□ -0.86
HDAC6-233ENST00000489352 GPR68Q15743 365 aa9.65□□□□□ -0.86
HDAC6-233ENST00000489352 TMEM155Q4W5P6 130 aa9.65□□□□□ -0.86
HDAC6-233ENST00000489352 CREB3L2Q70SY1 520 aa9.65□□□□□ -0.86
HDAC6-233ENST00000489352 LYG1Q8N1E2 194 aa9.65□□□□□ -0.86
HDAC6-233ENST00000489352 POU5F2Q8N7G0 328 aa9.65□□□□□ -0.86
HDAC6-233ENST00000489352 GATAD2BQ8WXI9 593 aa9.65□□□□□ -0.86
HDAC6-233ENST00000489352 BAG1Q99933 345 aaPredicted RBP9.65□□□□□ -0.86
HDAC6-233ENST00000489352 TAPBPLQ9BX59 468 aa9.65□□□□□ -0.86
HDAC6-233ENST00000489352 ACPTQ9BZG2 426 aa9.65□□□□□ -0.86
HDAC6-233ENST00000489352 MMP28Q9H239 520 aa9.65□□□□□ -0.86
HDAC6-233ENST00000489352 OR51B6Q9H340 312 aa9.65□□□□□ -0.86
HDAC6-233ENST00000489352 GPR35Q9HC97 309 aa9.65□□□□□ -0.86
HDAC6-233ENST00000489352 ZCCHC3Q9NUD5 404 aaKnown RBP9.65□□□□□ -0.86
HDAC6-233ENST00000489352 ACOXLQ9NUZ1 547 aa9.65□□□□□ -0.86
HDAC6-233ENST00000489352 FBXL3Q9UKT7 428 aa9.65□□□□□ -0.86
HDAC6-233ENST00000489352 FAF1Q9UNN5 650 aaPredicted RBP9.65□□□□□ -0.86
HDAC6-233ENST00000489352 TMED7Q9Y3B3 224 aa9.65□□□□□ -0.86
HDAC6-233ENST00000489352 IGLV3-9A0A075B6K5 115 aa9.64□□□□□ -0.87
HDAC6-233ENST00000489352 AQP7P3A6NL99 342 aa9.64□□□□□ -0.87
HDAC6-233ENST00000489352 ZNF99A8MXY4 864 aaPredicted RBP9.64□□□□□ -0.87
HDAC6-233ENST00000489352 STX16-NPEPL1H3BU86 382 aa9.64□□□□□ -0.87
HDAC6-233ENST00000489352 STX16O14662 325 aa9.64□□□□□ -0.87
HDAC6-233ENST00000489352 TNFRSF13BO14836 293 aaPredicted RBP9.64□□□□□ -0.87
HDAC6-233ENST00000489352 ZNF208O43345 1280 aa9.64□□□□□ -0.87
HDAC6-233ENST00000489352 CHRM4P08173 479 aa9.64□□□□□ -0.87
HDAC6-233ENST00000489352 ZNF250P15622 560 aa9.64□□□□□ -0.87
HDAC6-233ENST00000489352 IER3P46695 156 aa9.64□□□□□ -0.87
HDAC6-233ENST00000489352 CDH13P55290 713 aa9.64□□□□□ -0.87
HDAC6-233ENST00000489352 RAB1AP62820 205 aa9.64□□□□□ -0.87
HDAC6-233ENST00000489352 GLO1Q04760 184 aa9.64□□□□□ -0.87
HDAC6-233ENST00000489352 RBBP4Q09028 425 aa9.64□□□□□ -0.87
HDAC6-233ENST00000489352 SLC35E4Q6ICL7 350 aa9.64□□□□□ -0.87
HDAC6-233ENST00000489352 C11orf88Q6PI97 169 aa9.64□□□□□ -0.87
HDAC6-233ENST00000489352 RPS27LQ71UM5 84 aaKnown RBP9.64□□□□□ -0.87
HDAC6-233ENST00000489352 RNF144BQ7Z419 303 aa9.64□□□□□ -0.87
HDAC6-233ENST00000489352 CENPLQ8N0S6 344 aaPredicted RBP9.64□□□□□ -0.87
HDAC6-233ENST00000489352 ZNF519Q8TB69 540 aa9.64□□□□□ -0.87
HDAC6-233ENST00000489352 METTL6Q8TCB7 284 aa9.64□□□□□ -0.87
HDAC6-233ENST00000489352 CFHR4Q92496 578 aa9.64□□□□□ -0.87
HDAC6-233ENST00000489352 CIDECQ96AQ7 238 aaPredicted RBP9.64□□□□□ -0.87
HDAC6-233ENST00000489352 ZG16BQ96DA0 208 aa9.64□□□□□ -0.87
HDAC6-233ENST00000489352 PLEKHA8Q96JA3 519 aa9.64□□□□□ -0.87
HDAC6-233ENST00000489352 PCGF1Q9BSM1 259 aa9.64□□□□□ -0.87
HDAC6-233ENST00000489352 ADPRHL2Q9NX46 363 aa9.64□□□□□ -0.87
HDAC6-233ENST00000489352 B3GNT2Q9NY97 397 aa9.64□□□□□ -0.87
HDAC6-233ENST00000489352 USH1CQ9Y6N9 552 aa9.64□□□□□ -0.87
HDAC6-233ENST00000489352 RYR1P21817 5038 aa9.63□□□□□ -0.87
HDAC6-233ENST00000489352 SERTM1A2A2V5 107 aa9.63□□□□□ -0.87
HDAC6-233ENST00000489352 PPP6CO00743 305 aa9.63□□□□□ -0.87
HDAC6-233ENST00000489352 RAD51CO43502 376 aa9.63□□□□□ -0.87
HDAC6-233ENST00000489352 KLHL2O95198 593 aa9.63□□□□□ -0.87
HDAC6-233ENST00000489352 F13BP05160 661 aa9.63□□□□□ -0.87
HDAC6-233ENST00000489352 KRT16P08779 473 aa9.63□□□□□ -0.87
HDAC6-233ENST00000489352 GIPRP48546 466 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms