RNA–Protein interactions for RNA: ENST00000489303.1

LMO4-203, Transcript of LIM domain only 4, humanhuman

TSL 2

Gene LMO4, Length 952 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-203ENST00000489303 SLC19A3Q9BZV2 496 aa11.86□□□□□ -0.51
LMO4-203ENST00000489303 AMBRA1Q9C0C7 1298 aa11.86□□□□□ -0.51
LMO4-203ENST00000489303 POLR2J2Q9GZM3 115 aaKnown RBP11.86□□□□□ -0.51
LMO4-203ENST00000489303 PCDHAC1Q9H158 963 aa11.86□□□□□ -0.51
LMO4-203ENST00000489303 POLR2J3Q9H1A7 115 aaKnown RBP11.86□□□□□ -0.51
LMO4-203ENST00000489303 SLC17A5Q9NRA2 495 aa11.86□□□□□ -0.51
LMO4-203ENST00000489303 FAIMQ9NVQ4 179 aa11.86□□□□□ -0.51
LMO4-203ENST00000489303 MRPL39Q9NYK5 338 aaKnown RBP11.86□□□□□ -0.51
LMO4-203ENST00000489303 SEC14L4Q9UDX3 406 aa11.86□□□□□ -0.51
LMO4-203ENST00000489303 A0A1W2PR80 420 aa11.85□□□□□ -0.51
LMO4-203ENST00000489303 M0R1B8 84 aa11.85□□□□□ -0.51
LMO4-203ENST00000489303 ABCD4O14678 606 aa11.85□□□□□ -0.51
LMO4-203ENST00000489303 INHBBP09529 407 aa11.85□□□□□ -0.51
LMO4-203ENST00000489303 FOSL1P15407 271 aa11.85□□□□□ -0.51
LMO4-203ENST00000489303 PTNP21246 168 aa11.85□□□□□ -0.51
LMO4-203ENST00000489303 AHCYP23526 432 aa11.85□□□□□ -0.51
LMO4-203ENST00000489303 LSP1P33241 339 aa11.85□□□□□ -0.51
LMO4-203ENST00000489303 NUDT2P50583 147 aa11.85□□□□□ -0.51
LMO4-203ENST00000489303 FOXG1P55316 489 aaPredicted RBP11.85□□□□□ -0.51
LMO4-203ENST00000489303 SH3BGRP55822 239 aaPredicted RBP11.85□□□□□ -0.51
LMO4-203ENST00000489303 UBE2NP61088 152 aaKnown RBP11.85□□□□□ -0.51
LMO4-203ENST00000489303 RPS4XP62701 263 aaKnown RBP11.85□□□□□ -0.51
LMO4-203ENST00000489303 PUDPQ08623 228 aa11.85□□□□□ -0.51
LMO4-203ENST00000489303 ZNF672Q499Z4 452 aaPredicted RBP11.85□□□□□ -0.51
LMO4-203ENST00000489303 CYBRD1Q53TN4 286 aa11.85□□□□□ -0.51
LMO4-203ENST00000489303 LINC00114Q6XXX2 140 aa11.85□□□□□ -0.51
LMO4-203ENST00000489303 HACD2Q6Y1H2 254 aa11.85□□□□□ -0.51
LMO4-203ENST00000489303 DEF8Q6ZN54 512 aa11.85□□□□□ -0.51
LMO4-203ENST00000489303 PIK3C3Q8NEB9 887 aa11.85□□□□□ -0.51
LMO4-203ENST00000489303 ANKK1Q8NFD2 765 aa11.85□□□□□ -0.51
LMO4-203ENST00000489303 OR4D11Q8NGI4 311 aa11.85□□□□□ -0.51
LMO4-203ENST00000489303 OR5J2Q8NH18 312 aa11.85□□□□□ -0.51
LMO4-203ENST00000489303 SLC41A3Q96GZ6 507 aa11.85□□□□□ -0.51
LMO4-203ENST00000489303 TPD52L3Q96J77 140 aa11.85□□□□□ -0.51
LMO4-203ENST00000489303 ALKBH3Q96Q83 286 aaPredicted RBP11.85□□□□□ -0.51
LMO4-203ENST00000489303 OBP2BQ9NPH6 170 aa11.85□□□□□ -0.51
LMO4-203ENST00000489303 B3GAT2Q9NPZ5 323 aa11.85□□□□□ -0.51
LMO4-203ENST00000489303 CMTM6Q9NX76 183 aa11.85□□□□□ -0.51
LMO4-203ENST00000489303 B3GAT1Q9P2W7 334 aa11.85□□□□□ -0.51
LMO4-203ENST00000489303 POU2F3Q9UKI9 436 aa11.85□□□□□ -0.51
LMO4-203ENST00000489303 NOX1Q9Y5S8 564 aa11.85□□□□□ -0.51
LMO4-203ENST00000489303 FREM1Q5H8C1 2179 aa11.85□□□□□ -0.51
LMO4-203ENST00000489303 ZNF726A6NNF4 738 aa11.84□□□□□ -0.51
LMO4-203ENST00000489303 MS4A18H0YCH9 400 aa11.84□□□□□ -0.51
LMO4-203ENST00000489303 SNX3O60493 162 aa11.84□□□□□ -0.51
LMO4-203ENST00000489303 UPK3AO75631 287 aa11.84□□□□□ -0.51
LMO4-203ENST00000489303 OR5F1O95221 314 aa11.84□□□□□ -0.51
LMO4-203ENST00000489303 LY6G6DO95868 133 aa11.84□□□□□ -0.51
LMO4-203ENST00000489303 ADORA3P0DMS8 318 aa11.84□□□□□ -0.51
LMO4-203ENST00000489303 UMPSP11172 480 aa11.84□□□□□ -0.51
LMO4-203ENST00000489303 SLC7A2P52569 658 aa11.84□□□□□ -0.51
LMO4-203ENST00000489303 CRYBA2P53672 197 aa11.84□□□□□ -0.51
LMO4-203ENST00000489303 CDH11P55287 796 aa11.84□□□□□ -0.51
LMO4-203ENST00000489303 GNGT1P63211 74 aa11.84□□□□□ -0.51
LMO4-203ENST00000489303 ROR2Q01974 943 aaKnown RBP11.84□□□□□ -0.51
LMO4-203ENST00000489303 POU3F1Q03052 451 aaPredicted RBP11.84□□□□□ -0.51
LMO4-203ENST00000489303 LIPEQ05469 1076 aa11.84□□□□□ -0.51
LMO4-203ENST00000489303 MS4A18Q3C1V0 323 aa11.84□□□□□ -0.51
LMO4-203ENST00000489303 Q5PR19 223 aa11.84□□□□□ -0.51
LMO4-203ENST00000489303 SLC22A25Q6T423 547 aa11.84□□□□□ -0.51
LMO4-203ENST00000489303 SEZ6L2Q6UXD5 910 aa11.84□□□□□ -0.51
LMO4-203ENST00000489303 PXKQ7Z7A4 578 aa11.84□□□□□ -0.51
LMO4-203ENST00000489303 SLC15A3Q8IY34 581 aa11.84□□□□□ -0.51
LMO4-203ENST00000489303 KBTBD8Q8NFY9 601 aa11.84□□□□□ -0.51
LMO4-203ENST00000489303 OR1K1Q8NGR3 316 aa11.84□□□□□ -0.51
LMO4-203ENST00000489303 SMAP2Q8WU79 429 aaPredicted RBP11.84□□□□□ -0.51
LMO4-203ENST00000489303 GTPBP3Q969Y2 492 aaKnown RBP11.84□□□□□ -0.51
LMO4-203ENST00000489303 PERPQ96FX8 193 aa11.84□□□□□ -0.51
LMO4-203ENST00000489303 MOGAT1Q96PD6 335 aa11.84□□□□□ -0.51
LMO4-203ENST00000489303 C1QTNF6Q9BXI9 259 aa11.84□□□□□ -0.51
LMO4-203ENST00000489303 ALG2Q9H553 416 aa11.84□□□□□ -0.51
LMO4-203ENST00000489303 FKRPQ9H9S5 495 aa11.84□□□□□ -0.51
LMO4-203ENST00000489303 MOV10Q9HCE1 1003 aaKnown RBP11.84□□□□□ -0.51
LMO4-203ENST00000489303 NANSQ9NR45 359 aa11.84□□□□□ -0.51
LMO4-203ENST00000489303 CISD1Q9NZ45 108 aaKnown RBP11.84□□□□□ -0.51
LMO4-203ENST00000489303 NPAP1Q9NZP6 1156 aa11.84□□□□□ -0.51
LMO4-203ENST00000489303 USP22Q9UPT9 525 aa11.84□□□□□ -0.51
LMO4-203ENST00000489303 LAMP3Q9UQV4 416 aa11.84□□□□□ -0.51
LMO4-203ENST00000489303 FN1P02751 2386 aaKnown RBP11.84□□□□□ -0.51
LMO4-203ENST00000489303 RAI1Q7Z5J4 1906 aaPredicted RBP11.84□□□□□ -0.51
LMO4-203ENST00000489303 TRIM64A6NGJ6 449 aa11.83□□□□□ -0.52
LMO4-203ENST00000489303 TRIM64BA6NI03 449 aa11.83□□□□□ -0.52
LMO4-203ENST00000489303 KPNA4O00629 521 aaPredicted RBP11.83□□□□□ -0.52
LMO4-203ENST00000489303 PLPP3O14495 311 aa11.83□□□□□ -0.52
LMO4-203ENST00000489303 SERPINI2O75830 405 aa11.83□□□□□ -0.52
LMO4-203ENST00000489303 CH25HO95992 272 aa11.83□□□□□ -0.52
LMO4-203ENST00000489303 THRBP10828 461 aa11.83□□□□□ -0.52
LMO4-203ENST00000489303 HOXB1P14653 301 aaPredicted RBP11.83□□□□□ -0.52
LMO4-203ENST00000489303 DRD4P21917 467 aa11.83□□□□□ -0.52
LMO4-203ENST00000489303 CD40P25942 277 aa11.83□□□□□ -0.52
LMO4-203ENST00000489303 PRDX6P30041 224 aa11.83□□□□□ -0.52
LMO4-203ENST00000489303 RBM34P42696 430 aaKnown RBP11.83□□□□□ -0.52
LMO4-203ENST00000489303 SELENOWP63302 87 aa11.83□□□□□ -0.52
LMO4-203ENST00000489303 ZNF74Q16587 644 aa11.83□□□□□ -0.52
LMO4-203ENST00000489303 TBRG1Q3YBR2 411 aa11.83□□□□□ -0.52
LMO4-203ENST00000489303 HIKESHIQ53FT3 197 aa11.83□□□□□ -0.52
LMO4-203ENST00000489303 ANKRD16Q6P6B7 361 aa11.83□□□□□ -0.52
LMO4-203ENST00000489303 PRSS57Q6UWY2 283 aa11.83□□□□□ -0.52
LMO4-203ENST00000489303 CLEC9AQ6UXN8 241 aa11.83□□□□□ -0.52
LMO4-203ENST00000489303 BIVMQ86UB2 503 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms