RNA–Protein interactions for RNA: ENST00000488964.5

CYTH3-209, Transcript of cytohesin 3, humanhuman

TSL 4

Gene CYTH3, Length 606 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-209ENST00000488964 MT-ND1P03886 318 aa13.28□□□□□ -0.28
CYTH3-209ENST00000488964 TNFRSF1BP20333 461 aa13.28□□□□□ -0.28
CYTH3-209ENST00000488964 PTNP21246 168 aa13.28□□□□□ -0.28
CYTH3-209ENST00000488964 SELENOPP49908 381 aa13.28□□□□□ -0.28
CYTH3-209ENST00000488964 ART1P52961 327 aa13.28□□□□□ -0.28
CYTH3-209ENST00000488964 PRPS1P60891 318 aa13.28□□□□□ -0.28
CYTH3-209ENST00000488964 UBE2NP61088 152 aaKnown RBP13.28□□□□□ -0.28
CYTH3-209ENST00000488964 KRT72Q14CN4 511 aa13.28□□□□□ -0.28
CYTH3-209ENST00000488964 ACKR1Q16570 336 aa13.28□□□□□ -0.28
CYTH3-209ENST00000488964 ZNF74Q16587 644 aa13.28□□□□□ -0.28
CYTH3-209ENST00000488964 C9orf135Q5VTT2 229 aa13.28□□□□□ -0.28
CYTH3-209ENST00000488964 RRM2BQ7LG56 351 aa13.28□□□□□ -0.28
CYTH3-209ENST00000488964 KDM8Q8N371 416 aa13.28□□□□□ -0.28
CYTH3-209ENST00000488964 ZIC4Q8N9L1 334 aa13.28□□□□□ -0.28
CYTH3-209ENST00000488964 TMEM239Q8WW34 195 aa13.28□□□□□ -0.28
CYTH3-209ENST00000488964 NRGNQ92686 78 aa13.28□□□□□ -0.28
CYTH3-209ENST00000488964 SGTBQ96EQ0 304 aa13.28□□□□□ -0.28
CYTH3-209ENST00000488964 MUS81Q96NY9 551 aa13.28□□□□□ -0.28
CYTH3-209ENST00000488964 ALKBH3Q96Q83 286 aaPredicted RBP13.28□□□□□ -0.28
CYTH3-209ENST00000488964 CCL19Q99731 98 aa13.28□□□□□ -0.28
CYTH3-209ENST00000488964 ZNF426Q9BUY5 554 aa13.28□□□□□ -0.28
CYTH3-209ENST00000488964 NDEL1Q9GZM8 345 aa13.28□□□□□ -0.28
CYTH3-209ENST00000488964 CCM2LQ9NUG4 571 aaPredicted RBP13.28□□□□□ -0.28
CYTH3-209ENST00000488964 BEX4Q9NWD9 120 aaPredicted RBP13.28□□□□□ -0.28
CYTH3-209ENST00000488964 MGAT4BQ9UQ53 548 aa13.28□□□□□ -0.28
CYTH3-209ENST00000488964 PRR14LQ5THK1 2151 aa13.28□□□□□ -0.28
CYTH3-209ENST00000488964 LRBAP50851 2863 aa13.27□□□□□ -0.28
CYTH3-209ENST00000488964 PLPP3O14495 311 aa13.27□□□□□ -0.29
CYTH3-209ENST00000488964 CLOCKO15516 846 aa13.27□□□□□ -0.29
CYTH3-209ENST00000488964 RNF13O43567 381 aa13.27□□□□□ -0.29
CYTH3-209ENST00000488964 SHOX2O60902 331 aaPredicted RBP13.27□□□□□ -0.29
CYTH3-209ENST00000488964 TMCC2O75069 709 aa13.27□□□□□ -0.29
CYTH3-209ENST00000488964 ITGA5P08648 1049 aa13.27□□□□□ -0.29
CYTH3-209ENST00000488964 CDH2P19022 906 aaPredicted RBP13.27□□□□□ -0.29
CYTH3-209ENST00000488964 EDNRAP25101 427 aa13.27□□□□□ -0.29
CYTH3-209ENST00000488964 IST1P53990 364 aa13.27□□□□□ -0.29
CYTH3-209ENST00000488964 PIN1Q13526 163 aaPredicted RBP13.27□□□□□ -0.29
CYTH3-209ENST00000488964 TRAM2Q15035 370 aa13.27□□□□□ -0.29
CYTH3-209ENST00000488964 GABRA6Q16445 453 aa13.27□□□□□ -0.29
CYTH3-209ENST00000488964 NCMAPQ5T1S8 102 aa13.27□□□□□ -0.29
CYTH3-209ENST00000488964 GLYATQ6IB77 296 aa13.27□□□□□ -0.29
CYTH3-209ENST00000488964 CDK20Q8IZL9 346 aa13.27□□□□□ -0.29
CYTH3-209ENST00000488964 OFCC1Q8IZS5 231 aa13.27□□□□□ -0.29
CYTH3-209ENST00000488964 OR52N5Q8NH56 324 aa13.27□□□□□ -0.29
CYTH3-209ENST00000488964 HSH2DQ96JZ2 352 aa13.27□□□□□ -0.29
CYTH3-209ENST00000488964 ADAD1Q96M93 576 aaKnown RBP13.27□□□□□ -0.29
CYTH3-209ENST00000488964 MOGAT1Q96PD6 335 aa13.27□□□□□ -0.29
CYTH3-209ENST00000488964 ALPK1Q96QP1 1244 aa13.27□□□□□ -0.29
CYTH3-209ENST00000488964 FOXC2Q99958 501 aa13.27□□□□□ -0.29
CYTH3-209ENST00000488964 KCNS3Q9BQ31 491 aa13.27□□□□□ -0.29
CYTH3-209ENST00000488964 AMBRA1Q9C0C7 1298 aa13.27□□□□□ -0.29
CYTH3-209ENST00000488964 KRCC1Q9NPI7 259 aaPredicted RBP13.27□□□□□ -0.29
CYTH3-209ENST00000488964 B3GAT1Q9P2W7 334 aa13.27□□□□□ -0.29
CYTH3-209ENST00000488964 STX18Q9P2W9 335 aaKnown RBP13.27□□□□□ -0.29
CYTH3-209ENST00000488964 SEC14L4Q9UDX3 406 aa13.27□□□□□ -0.29
CYTH3-209ENST00000488964 DSCAMO60469 2012 aa13.27□□□□□ -0.29
CYTH3-209ENST00000488964 MCIDASD6RGH6 385 aa13.26□□□□□ -0.29
CYTH3-209ENST00000488964 C11orf98E9PRG8 122 aa13.26□□□□□ -0.29
CYTH3-209ENST00000488964 PDLIM1O00151 329 aa13.26□□□□□ -0.29
CYTH3-209ENST00000488964 SIAH2O43255 324 aa13.26□□□□□ -0.29
CYTH3-209ENST00000488964 TRAF3IP2O43734 574 aaPredicted RBP13.26□□□□□ -0.29
CYTH3-209ENST00000488964 SERPINI2O75830 405 aa13.26□□□□□ -0.29
CYTH3-209ENST00000488964 STAMBPO95630 424 aa13.26□□□□□ -0.29
CYTH3-209ENST00000488964 HSD17B1P14061 328 aa13.26□□□□□ -0.29
CYTH3-209ENST00000488964 HOXB1P14653 301 aaPredicted RBP13.26□□□□□ -0.29
CYTH3-209ENST00000488964 ITGA2P17301 1181 aa13.26□□□□□ -0.29
CYTH3-209ENST00000488964 PTAFRP25105 342 aa13.26□□□□□ -0.29
CYTH3-209ENST00000488964 CADP27708 2225 aa13.26□□□□□ -0.29
CYTH3-209ENST00000488964 NTF4P34130 210 aa13.26□□□□□ -0.29
CYTH3-209ENST00000488964 ROR2Q01974 943 aaKnown RBP13.26□□□□□ -0.29
CYTH3-209ENST00000488964 TAF11Q15544 211 aa13.26□□□□□ -0.29
CYTH3-209ENST00000488964 DEFB113Q30KQ7 82 aa13.26□□□□□ -0.29
CYTH3-209ENST00000488964 WDR88Q6ZMY6 472 aa13.26□□□□□ -0.29
CYTH3-209ENST00000488964 VTCN1Q7Z7D3 282 aa13.26□□□□□ -0.29
CYTH3-209ENST00000488964 ARHGAP24Q8N264 748 aa13.26□□□□□ -0.29
CYTH3-209ENST00000488964 OR6N1Q8NGY5 312 aa13.26□□□□□ -0.29
CYTH3-209ENST00000488964 MCUR1Q96AQ8 359 aa13.26□□□□□ -0.29
CYTH3-209ENST00000488964 LRR1Q96L50 414 aa13.26□□□□□ -0.29
CYTH3-209ENST00000488964 SLC17A5Q9NRA2 495 aa13.26□□□□□ -0.29
CYTH3-209ENST00000488964 ARL8BQ9NVJ2 186 aa13.26□□□□□ -0.29
CYTH3-209ENST00000488964 FAIMQ9NVQ4 179 aa13.26□□□□□ -0.29
CYTH3-209ENST00000488964 EGFL7Q9UHF1 273 aa13.26□□□□□ -0.29
CYTH3-209ENST00000488964 TACC2O95359 2948 aa13.26□□□□□ -0.29
CYTH3-209ENST00000488964 A0A1W2PRG6 482 aa13.25□□□□□ -0.29
CYTH3-209ENST00000488964 HS3ST1O14792 307 aa13.25□□□□□ -0.29
CYTH3-209ENST00000488964 SMPD2O60906 423 aa13.25□□□□□ -0.29
CYTH3-209ENST00000488964 OR7A10O76100 309 aa13.25□□□□□ -0.29
CYTH3-209ENST00000488964 ATE1O95260 518 aa13.25□□□□□ -0.29
CYTH3-209ENST00000488964 LYPD3O95274 346 aa13.25□□□□□ -0.29
CYTH3-209ENST00000488964 THY1P04216 161 aa13.25□□□□□ -0.29
CYTH3-209ENST00000488964 NR2C1P13056 603 aa13.25□□□□□ -0.29
CYTH3-209ENST00000488964 NCK1P16333 377 aa13.25□□□□□ -0.29
CYTH3-209ENST00000488964 TCN1P20061 433 aaPredicted RBP13.25□□□□□ -0.29
CYTH3-209ENST00000488964 CALB2P22676 271 aa13.25□□□□□ -0.29
CYTH3-209ENST00000488964 DAP3P51398 398 aaKnown RBP13.25□□□□□ -0.29
CYTH3-209ENST00000488964 BSPH1Q075Z2 132 aa13.25□□□□□ -0.29
CYTH3-209ENST00000488964 ZP4Q12836 540 aa13.25□□□□□ -0.29
CYTH3-209ENST00000488964 FOXD4Q12950 439 aaPredicted RBP13.25□□□□□ -0.29
CYTH3-209ENST00000488964 ANKRD16Q6P6B7 361 aa13.25□□□□□ -0.29
CYTH3-209ENST00000488964 C22orf34Q6ZV56 151 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms