RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 SLC26A7Q8TE54 656 aa12.09□□□□□ -0.47
SPTLC1-207ENST00000488921 ADAD1Q96M93 576 aaKnown RBP12.09□□□□□ -0.47
SPTLC1-207ENST00000488921 ARHGDIGQ99819 225 aa12.09□□□□□ -0.47
SPTLC1-207ENST00000488921 KCNS3Q9BQ31 491 aa12.09□□□□□ -0.47
SPTLC1-207ENST00000488921 TMEM43Q9BTV4 400 aa12.09□□□□□ -0.47
SPTLC1-207ENST00000488921 ASPNQ9BXN1 380 aa12.09□□□□□ -0.47
SPTLC1-207ENST00000488921 RSPO3Q9BXY4 272 aaPredicted RBP12.09□□□□□ -0.47
SPTLC1-207ENST00000488921 CBLN4Q9NTU7 201 aa12.09□□□□□ -0.47
SPTLC1-207ENST00000488921 PLCE1Q9P212 2302 aa12.08□□□□□ -0.48
SPTLC1-207ENST00000488921 LOC102725191A0A1B0GVB3 256 aa12.08□□□□□ -0.48
SPTLC1-207ENST00000488921 E7EQL1 145 aa12.08□□□□□ -0.48
SPTLC1-207ENST00000488921 NDUFAB1O14561 156 aa12.08□□□□□ -0.48
SPTLC1-207ENST00000488921 CHP2O43745 196 aa12.08□□□□□ -0.48
SPTLC1-207ENST00000488921 SNX3O60493 162 aa12.08□□□□□ -0.48
SPTLC1-207ENST00000488921 LY6G6DO95868 133 aa12.08□□□□□ -0.48
SPTLC1-207ENST00000488921 NPPAP01160 153 aa12.08□□□□□ -0.48
SPTLC1-207ENST00000488921 OPN1SWP03999 348 aa12.08□□□□□ -0.48
SPTLC1-207ENST00000488921 BMP4P12644 408 aa12.08□□□□□ -0.48
SPTLC1-207ENST00000488921 HOXB1P14653 301 aaPredicted RBP12.08□□□□□ -0.48
SPTLC1-207ENST00000488921 HOXB4P17483 251 aaPredicted RBP12.08□□□□□ -0.48
SPTLC1-207ENST00000488921 FABP6P51161 128 aa12.08□□□□□ -0.48
SPTLC1-207ENST00000488921 CDH12P55289 794 aa12.08□□□□□ -0.48
SPTLC1-207ENST00000488921 TBRG1Q3YBR2 411 aa12.08□□□□□ -0.48
SPTLC1-207ENST00000488921 HIKESHIQ53FT3 197 aa12.08□□□□□ -0.48
SPTLC1-207ENST00000488921 CGB2Q6NT52 195 aa12.08□□□□□ -0.48
SPTLC1-207ENST00000488921 ANKRD16Q6P6B7 361 aa12.08□□□□□ -0.48
SPTLC1-207ENST00000488921 UEVLDQ8IX04 471 aa12.08□□□□□ -0.48
SPTLC1-207ENST00000488921 KDM8Q8N371 416 aa12.08□□□□□ -0.48
SPTLC1-207ENST00000488921 ANKS4BQ8N8V4 417 aa12.08□□□□□ -0.48
SPTLC1-207ENST00000488921 OR10A6Q8NH74 314 aa12.08□□□□□ -0.48
SPTLC1-207ENST00000488921 BCAS4Q8TDM0 211 aa12.08□□□□□ -0.48
SPTLC1-207ENST00000488921 MCHR1Q99705 422 aa12.08□□□□□ -0.48
SPTLC1-207ENST00000488921 C1QTNF6Q9BXI9 259 aa12.08□□□□□ -0.48
SPTLC1-207ENST00000488921 B3GAT1Q9P2W7 334 aa12.08□□□□□ -0.48
SPTLC1-207ENST00000488921 SEC14L4Q9UDX3 406 aa12.08□□□□□ -0.48
SPTLC1-207ENST00000488921 ARPC4-TTLL3A0A0A6YYG9 625 aa12.07□□□□□ -0.48
SPTLC1-207ENST00000488921 RPL36A-HNRNPH2H7BZ11 118 aa12.07□□□□□ -0.48
SPTLC1-207ENST00000488921 M0QX08 132 aa12.07□□□□□ -0.48
SPTLC1-207ENST00000488921 M0R3H8 397 aa12.07□□□□□ -0.48
SPTLC1-207ENST00000488921 CCDC22O60826 627 aa12.07□□□□□ -0.48
SPTLC1-207ENST00000488921 UPK3AO75631 287 aa12.07□□□□□ -0.48
SPTLC1-207ENST00000488921 ZNF432O94892 652 aa12.07□□□□□ -0.48
SPTLC1-207ENST00000488921 MT-ATP6P00846 226 aa12.07□□□□□ -0.48
SPTLC1-207ENST00000488921 CD8AP01732 235 aa12.07□□□□□ -0.48
SPTLC1-207ENST00000488921 CBX1P83916 185 aa12.07□□□□□ -0.48
SPTLC1-207ENST00000488921 ROR2Q01974 943 aaKnown RBP12.07□□□□□ -0.48
SPTLC1-207ENST00000488921 TNK1Q13470 666 aa12.07□□□□□ -0.48
SPTLC1-207ENST00000488921 DUSP7Q16829 419 aa12.07□□□□□ -0.48
SPTLC1-207ENST00000488921 VMACQ2NL98 169 aa12.07□□□□□ -0.48
SPTLC1-207ENST00000488921 C3orf36Q3SXR2 165 aa12.07□□□□□ -0.48
SPTLC1-207ENST00000488921 C11orf71Q6IPW1 123 aa12.07□□□□□ -0.48
SPTLC1-207ENST00000488921 Q71RC1 249 aaPredicted RBP12.07□□□□□ -0.48
SPTLC1-207ENST00000488921 PIGWQ7Z7B1 504 aa12.07□□□□□ -0.48
SPTLC1-207ENST00000488921 C10orf53Q8N6V4 93 aa12.07□□□□□ -0.48
SPTLC1-207ENST00000488921 OR8J3Q8NGG0 315 aa12.07□□□□□ -0.48
SPTLC1-207ENST00000488921 SLC41A3Q96GZ6 507 aa12.07□□□□□ -0.48
SPTLC1-207ENST00000488921 SLC38A2Q96QD8 506 aa12.07□□□□□ -0.48
SPTLC1-207ENST00000488921 PRR14Q9BWN1 585 aa12.07□□□□□ -0.48
SPTLC1-207ENST00000488921 CACNG6Q9BXT2 260 aa12.07□□□□□ -0.48
SPTLC1-207ENST00000488921 MRPL39Q9NYK5 338 aaKnown RBP12.07□□□□□ -0.48
SPTLC1-207ENST00000488921 ARL2BPQ9Y2Y0 163 aa12.07□□□□□ -0.48
SPTLC1-207ENST00000488921 ATP23Q9Y6H3 246 aa12.07□□□□□ -0.48
SPTLC1-207ENST00000488921 FBP2O00757 339 aa12.06□□□□□ -0.48
SPTLC1-207ENST00000488921 MRASO14807 208 aa12.06□□□□□ -0.48
SPTLC1-207ENST00000488921 TRAF3IP2O43734 574 aaPredicted RBP12.06□□□□□ -0.48
SPTLC1-207ENST00000488921 TPST2O60704 377 aa12.06□□□□□ -0.48
SPTLC1-207ENST00000488921 IGHV4-39P01824 125 aa12.06□□□□□ -0.48
SPTLC1-207ENST00000488921 CRYAAP02489 173 aa12.06□□□□□ -0.48
SPTLC1-207ENST00000488921 BGLAPP02818 100 aa12.06□□□□□ -0.48
SPTLC1-207ENST00000488921 CBLP22681 906 aa12.06□□□□□ -0.48
SPTLC1-207ENST00000488921 APOBEC3AP31941 199 aaPredicted RBP12.06□□□□□ -0.48
SPTLC1-207ENST00000488921 ACVR1BP36896 505 aa12.06□□□□□ -0.48
SPTLC1-207ENST00000488921 POU3F1Q03052 451 aaPredicted RBP12.06□□□□□ -0.48
SPTLC1-207ENST00000488921 CHRNB3Q05901 458 aa12.06□□□□□ -0.48
SPTLC1-207ENST00000488921 LGALS3BPQ08380 585 aa12.06□□□□□ -0.48
SPTLC1-207ENST00000488921 PUDPQ08623 228 aa12.06□□□□□ -0.48
SPTLC1-207ENST00000488921 KLF10Q13118 480 aa12.06□□□□□ -0.48
SPTLC1-207ENST00000488921 PMS2P3Q13401 168 aa12.06□□□□□ -0.48
SPTLC1-207ENST00000488921 ENTPD8Q5MY95 495 aa12.06□□□□□ -0.48
SPTLC1-207ENST00000488921 REP15Q6BDI9 236 aa12.06□□□□□ -0.48
SPTLC1-207ENST00000488921 NANOGP8Q6NSW7 305 aa12.06□□□□□ -0.48
SPTLC1-207ENST00000488921 ERICH5Q6P6B1 374 aa12.06□□□□□ -0.48
SPTLC1-207ENST00000488921 B3GLCTQ6Y288 498 aa12.06□□□□□ -0.48
SPTLC1-207ENST00000488921 CCDC80Q76M96 950 aa12.06□□□□□ -0.48
SPTLC1-207ENST00000488921 LINGO2Q7L985 606 aa12.06□□□□□ -0.48
SPTLC1-207ENST00000488921 SNX32Q86XE0 403 aa12.06□□□□□ -0.48
SPTLC1-207ENST00000488921 PCYOX1LQ8NBM8 494 aa12.06□□□□□ -0.48
SPTLC1-207ENST00000488921 CCDC197Q8NCU1 140 aa12.06□□□□□ -0.48
SPTLC1-207ENST00000488921 GPR32P1Q8NGA4 272 aa12.06□□□□□ -0.48
SPTLC1-207ENST00000488921 OR6T1Q8NGN1 323 aa12.06□□□□□ -0.48
SPTLC1-207ENST00000488921 VANGL1Q8TAA9 524 aaPredicted RBP12.06□□□□□ -0.48
SPTLC1-207ENST00000488921 ADAMTS16Q8TE57 1224 aa12.06□□□□□ -0.48
SPTLC1-207ENST00000488921 C10orf82Q8WW14 230 aa12.06□□□□□ -0.48
SPTLC1-207ENST00000488921 BCL2L2Q92843 193 aaPredicted RBP12.06□□□□□ -0.48
SPTLC1-207ENST00000488921 LRRC58Q96CX6 371 aa12.06□□□□□ -0.48
SPTLC1-207ENST00000488921 OR2M2Q96R28 347 aa12.06□□□□□ -0.48
SPTLC1-207ENST00000488921 ECSITQ9BQ95 431 aa12.06□□□□□ -0.48
SPTLC1-207ENST00000488921 WFDC6Q9BQY6 131 aa12.06□□□□□ -0.48
SPTLC1-207ENST00000488921 KATNB1Q9BVA0 655 aa12.06□□□□□ -0.48
SPTLC1-207ENST00000488921 NANOGQ9H9S0 305 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms