RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 FCMRO60667 390 aa14.85□□□□□ -0.03
MCF2L-229ENST00000488765 PPP1R3DO95685 299 aa14.85□□□□□ -0.03
MCF2L-229ENST00000488765 ATP1B2P14415 290 aaPredicted RBP14.85□□□□□ -0.03
MCF2L-229ENST00000488765 PPP2R1BP30154 601 aa14.85□□□□□ -0.03
MCF2L-229ENST00000488765 RBM34P42696 430 aaKnown RBP14.85□□□□□ -0.03
MCF2L-229ENST00000488765 OLFML2AQ68BL7 652 aa14.85□□□□□ -0.03
MCF2L-229ENST00000488765 SLCO4C1Q6ZQN7 724 aa14.85□□□□□ -0.03
MCF2L-229ENST00000488765 TAF8Q7Z7C8 310 aa14.85□□□□□ -0.03
MCF2L-229ENST00000488765 NPAS4Q8IUM7 802 aa14.85□□□□□ -0.03
MCF2L-229ENST00000488765 OR1J4Q8NGS1 313 aa14.85□□□□□ -0.03
MCF2L-229ENST00000488765 ARL11Q969Q4 196 aa14.85□□□□□ -0.03
MCF2L-229ENST00000488765 JSRP1Q96MG2 331 aaPredicted RBP14.85□□□□□ -0.03
MCF2L-229ENST00000488765 HSPA12BQ96MM6 686 aa14.85□□□□□ -0.03
MCF2L-229ENST00000488765 DMRT3Q9NQL9 472 aa14.85□□□□□ -0.03
MCF2L-229ENST00000488765 SLC7A7Q9UM01 511 aa14.85□□□□□ -0.03
MCF2L-229ENST00000488765 A0A1B0GTQ1 180 aa14.85□□□□□ -0.03
MCF2L-229ENST00000488765 IFITM5A6NNB3 132 aa14.85□□□□□ -0.03
MCF2L-229ENST00000488765 C2orf74A8MZ97 194 aa14.85□□□□□ -0.03
MCF2L-229ENST00000488765 ASGR2P07307 311 aa14.85□□□□□ -0.03
MCF2L-229ENST00000488765 GKN3PP0CG01 181 aa14.85□□□□□ -0.03
MCF2L-229ENST00000488765 NDUFA6P56556 154 aa14.85□□□□□ -0.03
MCF2L-229ENST00000488765 AIMP2Q13155 320 aaKnown RBP14.85□□□□□ -0.03
MCF2L-229ENST00000488765 CRMP1Q14194 572 aa14.85□□□□□ -0.03
MCF2L-229ENST00000488765 RHOFQ9HBH0 211 aa14.85□□□□□ -0.03
MCF2L-229ENST00000488765 P2RX2Q9UBL9 471 aa14.85□□□□□ -0.03
MCF2L-229ENST00000488765 TRAV18A0A075B6X5 111 aa14.85□□□□□ -0.03
MCF2L-229ENST00000488765 PRKAR1BP31321 381 aa14.85□□□□□ -0.03
MCF2L-229ENST00000488765 POU3F4P49335 361 aa14.85□□□□□ -0.03
MCF2L-229ENST00000488765 EFNB2P52799 333 aa14.85□□□□□ -0.03
MCF2L-229ENST00000488765 ACSM1Q08AH1 577 aa14.85□□□□□ -0.03
MCF2L-229ENST00000488765 ELAVL2Q12926 359 aaKnown RBP14.85□□□□□ -0.03
MCF2L-229ENST00000488765 C3orf33Q6P1S2 294 aa14.85□□□□□ -0.03
MCF2L-229ENST00000488765 TMPRSS12Q86WS5 348 aa14.85□□□□□ -0.03
MCF2L-229ENST00000488765 ST7LQ8TDW4 575 aa14.85□□□□□ -0.03
MCF2L-229ENST00000488765 USP36Q9P275 1121 aaKnown RBP14.85□□□□□ -0.03
MCF2L-229ENST00000488765 ZNF840PA6NDX5 716 aa14.84□□□□□ -0.03
MCF2L-229ENST00000488765 BCL2L11O43521 198 aa14.84□□□□□ -0.03
MCF2L-229ENST00000488765 IGSF6O95976 241 aa14.84□□□□□ -0.03
MCF2L-229ENST00000488765 THY1P04216 161 aa14.84□□□□□ -0.03
MCF2L-229ENST00000488765 C6P13671 934 aa14.84□□□□□ -0.03
MCF2L-229ENST00000488765 RGS8P57771 180 aaPredicted RBP14.84□□□□□ -0.03
MCF2L-229ENST00000488765 TMPPEQ6ZT21 453 aa14.84□□□□□ -0.03
MCF2L-229ENST00000488765 FOXRED2Q8IWF2 684 aa14.84□□□□□ -0.03
MCF2L-229ENST00000488765 OR5K2Q8NHB8 316 aa14.84□□□□□ -0.03
MCF2L-229ENST00000488765 SECTM1Q8WVN6 248 aa14.84□□□□□ -0.03
MCF2L-229ENST00000488765 TMEM159Q96B96 161 aa14.84□□□□□ -0.03
MCF2L-229ENST00000488765 MYOFQ9NZM1 2061 aa14.84□□□□□ -0.03
MCF2L-229ENST00000488765 CLDN11O75508 207 aa14.84□□□□□ -0.03
MCF2L-229ENST00000488765 IL5P05113 134 aa14.84□□□□□ -0.03
MCF2L-229ENST00000488765 OR4E1P0C645 316 aa14.84□□□□□ -0.03
MCF2L-229ENST00000488765 GJA4P35212 333 aa14.84□□□□□ -0.03
MCF2L-229ENST00000488765 CTNNB1P35222 781 aa14.84□□□□□ -0.03
MCF2L-229ENST00000488765 CASRP41180 1078 aa14.84□□□□□ -0.03
MCF2L-229ENST00000488765 ELFN2Q5R3F8 820 aa14.84□□□□□ -0.03
MCF2L-229ENST00000488765 CD300LDQ6UXZ3 194 aa14.84□□□□□ -0.03
MCF2L-229ENST00000488765 ZNF620Q6ZNG0 422 aa14.84□□□□□ -0.03
MCF2L-229ENST00000488765 CD163Q86VB7 1156 aa14.84□□□□□ -0.03
MCF2L-229ENST00000488765 CCDC116Q8IYX3 515 aa14.84□□□□□ -0.03
MCF2L-229ENST00000488765 INO80EQ8NBZ0 244 aaPredicted RBP14.84□□□□□ -0.03
MCF2L-229ENST00000488765 OR10D4PQ8NGN7 298 aa14.84□□□□□ -0.03
MCF2L-229ENST00000488765 ZNF480Q8WV37 535 aa14.84□□□□□ -0.03
MCF2L-229ENST00000488765 SLC35G5Q96KT7 338 aa14.84□□□□□ -0.03
MCF2L-229ENST00000488765 NRIP2Q9BQI9 281 aa14.84□□□□□ -0.03
MCF2L-229ENST00000488765 BRF2Q9HAW0 419 aa14.84□□□□□ -0.03
MCF2L-229ENST00000488765 A4GALTQ9NPC4 353 aa14.84□□□□□ -0.03
MCF2L-229ENST00000488765 SMCO4Q9NRQ5 59 aa14.84□□□□□ -0.03
MCF2L-229ENST00000488765 DMRT1Q9Y5R6 373 aa14.84□□□□□ -0.03
MCF2L-229ENST00000488765 CARNS1A5YM72 827 aa14.83□□□□□ -0.03
MCF2L-229ENST00000488765 STC2O76061 302 aa14.83□□□□□ -0.03
MCF2L-229ENST00000488765 HMGN2P05204 90 aaKnown RBP14.83□□□□□ -0.03
MCF2L-229ENST00000488765 NPPBP16860 134 aa14.83□□□□□ -0.03
MCF2L-229ENST00000488765 NT5EP21589 574 aa14.83□□□□□ -0.03
MCF2L-229ENST00000488765 SURF2Q15527 256 aaPredicted RBP14.83□□□□□ -0.03
MCF2L-229ENST00000488765 FAM76BQ5HYJ3 339 aa14.83□□□□□ -0.03
MCF2L-229ENST00000488765 PRAMEF17Q5VTA0 474 aa14.83□□□□□ -0.03
MCF2L-229ENST00000488765 OR10K2Q6IF99 312 aa14.83□□□□□ -0.03
MCF2L-229ENST00000488765 ROBO4Q8WZ75 1007 aa14.83□□□□□ -0.03
MCF2L-229ENST00000488765 PMM1Q92871 262 aa14.83□□□□□ -0.03
MCF2L-229ENST00000488765 PELI1Q96FA3 418 aa14.83□□□□□ -0.03
MCF2L-229ENST00000488765 TMEM41AQ96HV5 264 aa14.83□□□□□ -0.03
MCF2L-229ENST00000488765 MCHR1Q99705 422 aa14.83□□□□□ -0.03
MCF2L-229ENST00000488765 ACKR4Q9NPB9 350 aa14.83□□□□□ -0.03
MCF2L-229ENST00000488765 SIRT3Q9NTG7 399 aaPredicted RBP14.83□□□□□ -0.03
MCF2L-229ENST00000488765 TRBV5-4A0A0C4DH59 114 aa14.83□□□□□ -0.04
MCF2L-229ENST00000488765 A0A0D9SG52 128 aa14.83□□□□□ -0.04
MCF2L-229ENST00000488765 FBXO24O75426 580 aa14.83□□□□□ -0.04
MCF2L-229ENST00000488765 SNRPCP09234 159 aaKnown RBP14.83□□□□□ -0.04
MCF2L-229ENST00000488765 SBK2P0C263 348 aa14.83□□□□□ -0.04
MCF2L-229ENST00000488765 IFNGR2P38484 337 aa14.83□□□□□ -0.04
MCF2L-229ENST00000488765 NRG3P56975 720 aa14.83□□□□□ -0.04
MCF2L-229ENST00000488765 HTRA4P83105 476 aaPredicted RBP14.83□□□□□ -0.04
MCF2L-229ENST00000488765 GAMTQ14353 236 aa14.83□□□□□ -0.04
MCF2L-229ENST00000488765 C11orf87Q6NUJ2 197 aa14.83□□□□□ -0.04
MCF2L-229ENST00000488765 PWWP2BQ6NUJ5 590 aa14.83□□□□□ -0.04
MCF2L-229ENST00000488765 KCNRGQ8N5I3 272 aa14.83□□□□□ -0.04
MCF2L-229ENST00000488765 OR5T3Q8NGG3 340 aa14.83□□□□□ -0.04
MCF2L-229ENST00000488765 ZCCHC2Q9C0B9 1178 aaKnown RBP14.83□□□□□ -0.04
MCF2L-229ENST00000488765 SYNDIG1Q9H7V2 258 aa14.83□□□□□ -0.04
MCF2L-229ENST00000488765 FN3KRPQ9HA64 309 aa14.83□□□□□ -0.04
MCF2L-229ENST00000488765 PRR13Q9NZ81 148 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms