RNA–Protein interactions for RNA: ENST00000488117.5

C9orf72-205, Transcript of chromosome 9 open reading frame 72, humanhuman

TSL 2

Gene C9orf72, Length 4,808 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-205ENST00000488117 SKP2Q13309 424 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 RIN1Q13671 783 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 RAB11BQ15907 218 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 TATDN3Q17R31 274 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 CT45A2Q5DJT8 189 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 PHF19Q5T6S3 580 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 HES5Q5TA89 166 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 TIGD3Q6B0B8 471 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 WDR74Q6RFH5 385 aaPredicted RBP2.42□□□□□ -2.02
C9orf72-205ENST00000488117 LINC00114Q6XXX2 140 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 TRILQ7L0X0 811 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 ZAR1Q86SH2 424 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 ATG4DQ86TL0 474 aaPredicted RBP2.42□□□□□ -2.02
C9orf72-205ENST00000488117 MARCH3Q86UD3 253 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 IZUMO1Q8IYV9 350 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 D2HGDHQ8N465 521 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 DNAJC5GQ8N7S2 189 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 ARIH2OSQ8N7S6 290 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 OR1N1Q8NGS0 311 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 STK35Q8TDR2 534 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 HOXB13Q92826 284 aaPredicted RBP2.42□□□□□ -2.02
C9orf72-205ENST00000488117 NAT6Q93015 286 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 TSLPQ969D9 159 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 CCDC74AQ96AQ1 378 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 TRMT61AQ96FX7 289 aaKnown RBP2.42□□□□□ -2.02
C9orf72-205ENST00000488117 OR2M2Q96R28 347 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 OR14A2Q96R54 314 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 SNX18Q96RF0 628 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 GPX7Q96SL4 187 aaPredicted RBP2.42□□□□□ -2.02
C9orf72-205ENST00000488117 LPAR4Q99677 370 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 NUDT9Q9BW91 350 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP2.42□□□□□ -2.02
C9orf72-205ENST00000488117 PTGES2Q9H7Z7 377 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 MMP25Q9NPA2 562 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 GPR27Q9NS67 375 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 CYSLTR2Q9NS75 346 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 ACOXLQ9NUZ1 547 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 MCUBQ9NWR8 336 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 TAS2R8Q9NYW2 309 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 EMC3Q9P0I2 261 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 DHCR7Q9UBM7 475 aaKnown RBP2.42□□□□□ -2.02
C9orf72-205ENST00000488117 DUX4Q9UBX2 424 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 MUTYHQ9UIF7 546 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 RBMX2Q9Y388 322 aaKnown RBP2.42□□□□□ -2.02
C9orf72-205ENST00000488117 AK6Q9Y3D8 172 aaKnown RBP2.42□□□□□ -2.02
C9orf72-205ENST00000488117 PIKFYVEQ9Y2I7 2098 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 C2orf16Q68DN1 1984 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 TRBV11-1A0A0K0K1C0 115 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 A0A1W2PPK0 400 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 A0A1W2PR77 199 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 A8MV72 311 aaPredicted RBP2.42□□□□□ -2.02
C9orf72-205ENST00000488117 FAM171A2A8MVW0 826 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 SOX1O00570 391 aaPredicted RBP2.42□□□□□ -2.02
C9orf72-205ENST00000488117 TSC22D2O75157 780 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 LDOC1O95751 146 aaPredicted RBP2.42□□□□□ -2.02
C9orf72-205ENST00000488117 PLGP00747 810 aaPredicted RBP2.42□□□□□ -2.02
C9orf72-205ENST00000488117 RAF1P04049 648 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 F13BP05160 661 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 KLK3P07288 261 aaPredicted RBP2.42□□□□□ -2.02
C9orf72-205ENST00000488117 NGFRP08138 427 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 SYPP08247 313 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 CSF1P09603 554 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 CLUP10909 449 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 ANXA3P12429 323 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 GAS1P54826 345 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 SLC37A1P57057 533 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 DCDP81605 110 aaKnown RBP2.42□□□□□ -2.02
C9orf72-205ENST00000488117 E2F1Q01094 437 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 ZNF117Q03924 483 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 GLO1Q04760 184 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 RPL18Q07020 188 aaKnown RBP2.42□□□□□ -2.02
C9orf72-205ENST00000488117 SELENBP1Q13228 472 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 ZNF79Q15937 498 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 SGCBQ16585 318 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 C1orf140Q5VVS0 124 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 TMEM53Q6P2H8 277 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 TMEM71Q6P5X7 295 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 IL20RBQ6UXL0 311 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 RPTNQ6XPR3 784 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 BPHLQ86WA6 291 aaPredicted RBP2.42□□□□□ -2.02
C9orf72-205ENST00000488117 TMPRSS12Q86WS5 348 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 COMMD2Q86X83 199 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 PLCZ1Q86YW0 608 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 MEIOBQ8N635 442 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 C17orf47Q8NEP4 570 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 OR4K17Q8NGC6 315 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 OR13C3Q8NGS6 347 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 OR1L3Q8NH93 324 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 SYNPRQ8TBG9 265 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 PTPMT1Q8WUK0 201 aaPredicted RBP2.42□□□□□ -2.02
C9orf72-205ENST00000488117 ST8SIA1Q92185 356 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 PTP4A1Q93096 173 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 PMEPA1Q969W9 287 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 HYLS1Q96M11 299 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 RBP7Q96R05 134 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 HCAR1Q9BXC0 346 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 RNF32Q9H0A6 362 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 NXF5Q9H1B4 397 aaKnown RBP2.42□□□□□ -2.02
C9orf72-205ENST00000488117 SYNPO2LQ9H987 977 aa2.42□□□□□ -2.02
C9orf72-205ENST00000488117 NOX4Q9NPH5 578 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms