RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 C12orf10Q9HB07 376 aa10.59□□□□□ -0.71
VPS16-208ENST00000487461 SLC52A3Q9NQ40 469 aa10.59□□□□□ -0.71
VPS16-208ENST00000487461 RCE1Q9Y256 329 aa10.59□□□□□ -0.71
VPS16-208ENST00000487461 MALRD1Q5VYJ5 2156 aa10.58□□□□□ -0.72
VPS16-208ENST00000487461 TRAV36DV7A0A075B6V5 113 aa10.58□□□□□ -0.72
VPS16-208ENST00000487461 IGHV4-61A0A0C4DH41 118 aa10.58□□□□□ -0.72
VPS16-208ENST00000487461 LOC102725191A0A1B0GVB3 256 aa10.58□□□□□ -0.72
VPS16-208ENST00000487461 SLC35F4A4IF30 521 aa10.58□□□□□ -0.72
VPS16-208ENST00000487461 ZNF503-AS2A6NEH8 195 aa10.58□□□□□ -0.72
VPS16-208ENST00000487461 MS4A18H0YCH9 400 aa10.58□□□□□ -0.72
VPS16-208ENST00000487461 NDUFS8O00217 210 aa10.58□□□□□ -0.72
VPS16-208ENST00000487461 AIM2O14862 343 aa10.58□□□□□ -0.72
VPS16-208ENST00000487461 PHF1O43189 567 aaPredicted RBP10.58□□□□□ -0.72
VPS16-208ENST00000487461 OR2T1O43869 369 aa10.58□□□□□ -0.72
VPS16-208ENST00000487461 LMX1BO60663 402 aa10.58□□□□□ -0.72
VPS16-208ENST00000487461 TGDSO95455 350 aa10.58□□□□□ -0.72
VPS16-208ENST00000487461 HPRP00739 348 aa10.58□□□□□ -0.72
VPS16-208ENST00000487461 ARAFP10398 606 aa10.58□□□□□ -0.72
VPS16-208ENST00000487461 GTF2E2P29084 291 aaKnown RBP10.58□□□□□ -0.72
VPS16-208ENST00000487461 THBS4P35443 961 aa10.58□□□□□ -0.72
VPS16-208ENST00000487461 SH3BGRP55822 239 aaPredicted RBP10.58□□□□□ -0.72
VPS16-208ENST00000487461 CDK6Q00534 326 aa10.58□□□□□ -0.72
VPS16-208ENST00000487461 EFNB3Q15768 340 aa10.58□□□□□ -0.72
VPS16-208ENST00000487461 CARTPTQ16568 116 aa10.58□□□□□ -0.72
VPS16-208ENST00000487461 CEACAM16Q2WEN9 425 aa10.58□□□□□ -0.72
VPS16-208ENST00000487461 MS4A18Q3C1V0 323 aa10.58□□□□□ -0.72
VPS16-208ENST00000487461 PHYHD1Q5SRE7 291 aa10.58□□□□□ -0.72
VPS16-208ENST00000487461 BEND6Q5SZJ8 279 aaPredicted RBP10.58□□□□□ -0.72
VPS16-208ENST00000487461 GCNT6Q5T4J0 391 aa10.58□□□□□ -0.72
VPS16-208ENST00000487461 FAM69AQ5T7M9 428 aa10.58□□□□□ -0.72
VPS16-208ENST00000487461 DHRS4L2Q6PKH6 230 aa10.58□□□□□ -0.72
VPS16-208ENST00000487461 H1FNTQ75WM6 255 aaPredicted RBP10.58□□□□□ -0.72
VPS16-208ENST00000487461 SLC46A3Q7Z3Q1 461 aa10.58□□□□□ -0.72
VPS16-208ENST00000487461 NET1Q7Z628 596 aaPredicted RBP10.58□□□□□ -0.72
VPS16-208ENST00000487461 TMEM123Q8N131 208 aa10.58□□□□□ -0.72
VPS16-208ENST00000487461 OR4F15Q8NGB8 312 aa10.58□□□□□ -0.72
VPS16-208ENST00000487461 SLC38A4Q969I6 547 aa10.58□□□□□ -0.72
VPS16-208ENST00000487461 OR2M2Q96R28 347 aa10.58□□□□□ -0.72
VPS16-208ENST00000487461 EBF4Q9BQW3 602 aa10.58□□□□□ -0.72
VPS16-208ENST00000487461 WFDC6Q9BQY6 131 aa10.58□□□□□ -0.72
VPS16-208ENST00000487461 IKZF5Q9H5V7 419 aa10.58□□□□□ -0.72
VPS16-208ENST00000487461 CRLF2Q9HC73 371 aa10.58□□□□□ -0.72
VPS16-208ENST00000487461 TCF7L2Q9NQB0 619 aa10.58□□□□□ -0.72
VPS16-208ENST00000487461 VAPAQ9P0L0 249 aa10.58□□□□□ -0.72
VPS16-208ENST00000487461 KLHL14Q9P2G3 628 aa10.58□□□□□ -0.72
VPS16-208ENST00000487461 FKBP7Q9Y680 259 aa10.58□□□□□ -0.72
VPS16-208ENST00000487461 LOC390937A0A1W2PQ73 354 aa10.57□□□□□ -0.72
VPS16-208ENST00000487461 TMEM129A0AVI4 362 aa10.57□□□□□ -0.72
VPS16-208ENST00000487461 TRAF3IP2O43734 574 aaPredicted RBP10.57□□□□□ -0.72
VPS16-208ENST00000487461 TPST2O60704 377 aa10.57□□□□□ -0.72
VPS16-208ENST00000487461 PDE5AO76074 875 aa10.57□□□□□ -0.72
VPS16-208ENST00000487461 HLA-DOBP13765 273 aa10.57□□□□□ -0.72
VPS16-208ENST00000487461 GZMKP49863 264 aa10.57□□□□□ -0.72
VPS16-208ENST00000487461 IDH3GP51553 393 aaPredicted RBP10.57□□□□□ -0.72
VPS16-208ENST00000487461 STX1BP61266 288 aa10.57□□□□□ -0.72
VPS16-208ENST00000487461 OR1Q1Q15612 314 aa10.57□□□□□ -0.72
VPS16-208ENST00000487461 ALG10BQ5I7T1 473 aa10.57□□□□□ -0.72
VPS16-208ENST00000487461 REEP3Q6NUK4 255 aa10.57□□□□□ -0.72
VPS16-208ENST00000487461 ULK3Q6PHR2 472 aa10.57□□□□□ -0.72
VPS16-208ENST00000487461 C5orf46Q6UWT4 87 aa10.57□□□□□ -0.72
VPS16-208ENST00000487461 NHLRC1Q6VVB1 395 aa10.57□□□□□ -0.72
VPS16-208ENST00000487461 WDFY1Q8IWB7 410 aa10.57□□□□□ -0.72
VPS16-208ENST00000487461 ZCCHC24Q8N2G6 241 aaKnown RBP10.57□□□□□ -0.72
VPS16-208ENST00000487461 GPR137CQ8N3F9 429 aa10.57□□□□□ -0.72
VPS16-208ENST00000487461 NUP37Q8NFH4 326 aa10.57□□□□□ -0.72
VPS16-208ENST00000487461 DNAJA4Q8WW22 397 aaPredicted RBP10.57□□□□□ -0.72
VPS16-208ENST00000487461 MSI2Q96DH6 328 aaKnown RBP10.57□□□□□ -0.72
VPS16-208ENST00000487461 SPDL1Q96EA4 605 aa10.57□□□□□ -0.72
VPS16-208ENST00000487461 SLC41A3Q96GZ6 507 aa10.57□□□□□ -0.72
VPS16-208ENST00000487461 TXNDC15Q96J42 360 aa10.57□□□□□ -0.72
VPS16-208ENST00000487461 C7orf26Q96N11 449 aa10.57□□□□□ -0.72
VPS16-208ENST00000487461 DOK1Q99704 481 aa10.57□□□□□ -0.72
VPS16-208ENST00000487461 PIMREGQ9BSJ6 248 aa10.57□□□□□ -0.72
VPS16-208ENST00000487461 SHARPINQ9H0F6 387 aa10.57□□□□□ -0.72
VPS16-208ENST00000487461 SLCO1B3Q9NPD5 702 aa10.57□□□□□ -0.72
VPS16-208ENST00000487461 CCDC167Q9P0B6 97 aa10.57□□□□□ -0.72
VPS16-208ENST00000487461 LPAR3Q9UBY5 353 aa10.57□□□□□ -0.72
VPS16-208ENST00000487461 GMEB1Q9Y692 573 aa10.57□□□□□ -0.72
VPS16-208ENST00000487461 A0A087WUJ7 227 aa10.56□□□□□ -0.72
VPS16-208ENST00000487461 TRBV5-3A0A0A0MS03 114 aa10.56□□□□□ -0.72
VPS16-208ENST00000487461 IGHV2OR16-5A0A0B4J2B6 119 aa10.56□□□□□ -0.72
VPS16-208ENST00000487461 LOC100289279A0A1B0GTE1 492 aa10.56□□□□□ -0.72
VPS16-208ENST00000487461 ZNF99A8MXY4 864 aaPredicted RBP10.56□□□□□ -0.72
VPS16-208ENST00000487461 hCG_2039718K7EN88 272 aa10.56□□□□□ -0.72
VPS16-208ENST00000487461 M0R3G1 203 aa10.56□□□□□ -0.72
VPS16-208ENST00000487461 POLR3GO15318 223 aaPredicted RBP10.56□□□□□ -0.72
VPS16-208ENST00000487461 SEC14L2O76054 403 aa10.56□□□□□ -0.72
VPS16-208ENST00000487461 STAMBPO95630 424 aa10.56□□□□□ -0.72
VPS16-208ENST00000487461 BGLAPP02818 100 aa10.56□□□□□ -0.72
VPS16-208ENST00000487461 IGFBP1P08833 259 aaPredicted RBP10.56□□□□□ -0.72
VPS16-208ENST00000487461 APEHP13798 732 aaKnown RBP10.56□□□□□ -0.72
VPS16-208ENST00000487461 GPX2P18283 190 aa10.56□□□□□ -0.72
VPS16-208ENST00000487461 NPR2P20594 1047 aa10.56□□□□□ -0.72
VPS16-208ENST00000487461 IGFBP5P24593 272 aa10.56□□□□□ -0.72
VPS16-208ENST00000487461 ARR3P36575 388 aa10.56□□□□□ -0.72
VPS16-208ENST00000487461 PPOXP50336 477 aa10.56□□□□□ -0.72
VPS16-208ENST00000487461 IL1RL1Q01638 556 aa10.56□□□□□ -0.72
VPS16-208ENST00000487461 SCARB2Q14108 478 aa10.56□□□□□ -0.72
VPS16-208ENST00000487461 ADRM1Q16186 407 aa10.56□□□□□ -0.72
VPS16-208ENST00000487461 IQCCQ4KMZ1 466 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms