RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 A0A0B4J203 849 aa23.77■■□□□ 1.4
HLA-C-208ENST00000487245 A0A1W2PPK0 400 aa23.77■■□□□ 1.4
HLA-C-208ENST00000487245 SMLR1H3BR10 107 aa23.77■■□□□ 1.4
HLA-C-208ENST00000487245 PIN1P1O15428 100 aa23.77■■□□□ 1.4
HLA-C-208ENST00000487245 IGKV3-11P04433 115 aa23.77■■□□□ 1.4
HLA-C-208ENST00000487245 ERVK-25P63136 954 aa23.77■■□□□ 1.4
HLA-C-208ENST00000487245 KCNAB1Q14722 419 aa23.77■■□□□ 1.4
HLA-C-208ENST00000487245 ZNF74Q16587 644 aa23.77■■□□□ 1.4
HLA-C-208ENST00000487245 SYT9Q86SS6 491 aa23.77■■□□□ 1.4
HLA-C-208ENST00000487245 GATSQ8NAP1 163 aa23.77■■□□□ 1.4
HLA-C-208ENST00000487245 CLIP3Q96DZ5 547 aa23.77■■□□□ 1.4
HLA-C-208ENST00000487245 LMF1Q96S06 567 aa23.77■■□□□ 1.4
HLA-C-208ENST00000487245 OR8D2Q9GZM6 311 aa23.77■■□□□ 1.4
HLA-C-208ENST00000487245 NOX4Q9NPH5 578 aa23.77■■□□□ 1.4
HLA-C-208ENST00000487245 SLCO1C1Q9NYB5 712 aa23.77■■□□□ 1.4
HLA-C-208ENST00000487245 HSPB11Q9Y547 144 aa23.77■■□□□ 1.4
HLA-C-208ENST00000487245 SPTBP11277 2137 aa23.76■■□□□ 1.39
HLA-C-208ENST00000487245 ERVH48-1M5A8F1 160 aa23.76■■□□□ 1.39
HLA-C-208ENST00000487245 FABP7O15540 132 aa23.76■■□□□ 1.39
HLA-C-208ENST00000487245 ITGA10O75578 1167 aa23.76■■□□□ 1.39
HLA-C-208ENST00000487245 GIFP27352 417 aa23.76■■□□□ 1.39
HLA-C-208ENST00000487245 OR1D4P47884 311 aa23.76■■□□□ 1.39
HLA-C-208ENST00000487245 C19orf57Q0VDD7 668 aa23.76■■□□□ 1.39
HLA-C-208ENST00000487245 OR11H7Q8NGC8 314 aa23.76■■□□□ 1.39
HLA-C-208ENST00000487245 C1orf216Q8TAB5 229 aa23.76■■□□□ 1.39
HLA-C-208ENST00000487245 ZNF671Q8TAW3 534 aa23.76■■□□□ 1.39
HLA-C-208ENST00000487245 ZPLD1Q8TCW7 415 aa23.76■■□□□ 1.39
HLA-C-208ENST00000487245 RNF166Q96A37 237 aaPredicted RBP23.76■■□□□ 1.39
HLA-C-208ENST00000487245 ADIPOR1Q96A54 375 aa23.76■■□□□ 1.39
HLA-C-208ENST00000487245 RASD2Q96D21 266 aa23.76■■□□□ 1.39
HLA-C-208ENST00000487245 ZFP3Q96NJ6 502 aa23.76■■□□□ 1.39
HLA-C-208ENST00000487245 PDCD1LG2Q9BQ51 273 aa23.76■■□□□ 1.39
HLA-C-208ENST00000487245 TTYH1Q9H313 450 aaPredicted RBP23.76■■□□□ 1.39
HLA-C-208ENST00000487245 NANSQ9NR45 359 aa23.76■■□□□ 1.39
HLA-C-208ENST00000487245 IGHV1OR21-1A0A087WYE8 117 aa23.75■■□□□ 1.39
HLA-C-208ENST00000487245 TRABD2BA6NFA1 517 aa23.75■■□□□ 1.39
HLA-C-208ENST00000487245 AIPO00170 330 aa23.75■■□□□ 1.39
HLA-C-208ENST00000487245 TXNDC12O95881 172 aa23.75■■□□□ 1.39
HLA-C-208ENST00000487245 CD14P08571 375 aa23.75■■□□□ 1.39
HLA-C-208ENST00000487245 HTR2BP41595 481 aa23.75■■□□□ 1.39
HLA-C-208ENST00000487245 SLC16A9Q7RTY1 509 aa23.75■■□□□ 1.39
HLA-C-208ENST00000487245 CMTM4Q8IZR5 234 aa23.75■■□□□ 1.39
HLA-C-208ENST00000487245 EID2Q8N6I1 236 aa23.75■■□□□ 1.39
HLA-C-208ENST00000487245 C10orf53Q8N6V4 93 aa23.75■■□□□ 1.39
HLA-C-208ENST00000487245 ZNF321PQ8N8H1 164 aa23.75■■□□□ 1.39
HLA-C-208ENST00000487245 ZNF721Q8TF20 911 aa23.75■■□□□ 1.39
HLA-C-208ENST00000487245 SNAPC3Q92966 411 aa23.75■■□□□ 1.39
HLA-C-208ENST00000487245 GPR137Q96N19 417 aa23.75■■□□□ 1.39
HLA-C-208ENST00000487245 GFI1Q99684 422 aa23.75■■□□□ 1.39
HLA-C-208ENST00000487245 ALG12Q9BV10 488 aa23.75■■□□□ 1.39
HLA-C-208ENST00000487245 AKAP7Q9P0M2 348 aaPredicted RBP23.75■■□□□ 1.39
HLA-C-208ENST00000487245 A8MUA0 341 aa23.75■■□□□ 1.39
HLA-C-208ENST00000487245 NUDT21O43809 227 aaKnown RBP23.75■■□□□ 1.39
HLA-C-208ENST00000487245 SDC3O75056 442 aa23.75■■□□□ 1.39
HLA-C-208ENST00000487245 DDAH2O95865 285 aa23.75■■□□□ 1.39
HLA-C-208ENST00000487245 H2AFB2P0C5Z0 115 aa23.75■■□□□ 1.39
HLA-C-208ENST00000487245 ANXA3P12429 323 aa23.75■■□□□ 1.39
HLA-C-208ENST00000487245 PSMB10P40306 273 aa23.75■■□□□ 1.39
HLA-C-208ENST00000487245 CCR4P51679 360 aa23.75■■□□□ 1.39
HLA-C-208ENST00000487245 OR1D5P58170 312 aa23.75■■□□□ 1.39
HLA-C-208ENST00000487245 FAM69AQ5T7M9 428 aa23.75■■□□□ 1.39
HLA-C-208ENST00000487245 FAM199XQ6PEV8 388 aaPredicted RBP23.75■■□□□ 1.39
HLA-C-208ENST00000487245 FAM122BQ7Z309 247 aa23.75■■□□□ 1.39
HLA-C-208ENST00000487245 JAZF1Q86VZ6 243 aa23.75■■□□□ 1.39
HLA-C-208ENST00000487245 MOSPD2Q8NHP6 518 aa23.75■■□□□ 1.39
HLA-C-208ENST00000487245 TTC9Q92623 222 aa23.75■■□□□ 1.39
HLA-C-208ENST00000487245 HGDQ93099 445 aa23.75■■□□□ 1.39
HLA-C-208ENST00000487245 CCDC86Q9H6F5 360 aaKnown RBP23.75■■□□□ 1.39
HLA-C-208ENST00000487245 ZFP64Q9NPA5 681 aa23.75■■□□□ 1.39
HLA-C-208ENST00000487245 UCKL1Q9NWZ5 548 aa23.75■■□□□ 1.39
HLA-C-208ENST00000487245 ANKRD10Q9NXR5 420 aa23.75■■□□□ 1.39
HLA-C-208ENST00000487245 SEMA5BQ9P283 1151 aa23.75■■□□□ 1.39
HLA-C-208ENST00000487245 IFITM5A6NNB3 132 aa23.74■■□□□ 1.39
HLA-C-208ENST00000487245 OIP5O43482 229 aa23.74■■□□□ 1.39
HLA-C-208ENST00000487245 SULT1B1O43704 296 aa23.74■■□□□ 1.39
HLA-C-208ENST00000487245 DUX1O43812 170 aa23.74■■□□□ 1.39
HLA-C-208ENST00000487245 GSG1Q2KHT4 349 aa23.74■■□□□ 1.39
HLA-C-208ENST00000487245 EMC4Q5J8M3 183 aa23.74■■□□□ 1.39
HLA-C-208ENST00000487245 YOD1Q5VVQ6 348 aaPredicted RBP23.74■■□□□ 1.39
HLA-C-208ENST00000487245 FGD2Q7Z6J4 655 aa23.74■■□□□ 1.39
HLA-C-208ENST00000487245 D2HGDHQ8N465 521 aa23.74■■□□□ 1.39
HLA-C-208ENST00000487245 OR6K6Q8NGW6 343 aa23.74■■□□□ 1.39
HLA-C-208ENST00000487245 OR56B4Q8NH76 319 aa23.74■■□□□ 1.39
HLA-C-208ENST00000487245 TSLPQ969D9 159 aa23.74■■□□□ 1.39
HLA-C-208ENST00000487245 SHDQ96IW2 340 aa23.74■■□□□ 1.39
HLA-C-208ENST00000487245 DERL3Q96Q80 235 aa23.74■■□□□ 1.39
HLA-C-208ENST00000487245 RXFP3Q9NSD7 469 aa23.74■■□□□ 1.39
HLA-C-208ENST00000487245 CLEC4AQ9UMR7 237 aa23.74■■□□□ 1.39
HLA-C-208ENST00000487245 HEATR5AQ86XA9 2040 aa23.74■■□□□ 1.39
HLA-C-208ENST00000487245 TCRBV16S1A1N1A0A5B0 115 aa23.73■■□□□ 1.39
HLA-C-208ENST00000487245 BLOC1S5-TXNDC5H3BN57 136 aa23.73■■□□□ 1.39
HLA-C-208ENST00000487245 TACSTD2P09758 323 aa23.73■■□□□ 1.39
HLA-C-208ENST00000487245 FBLP22087 321 aaKnown RBP23.73■■□□□ 1.39
HLA-C-208ENST00000487245 DPP4P27487 766 aa23.73■■□□□ 1.39
HLA-C-208ENST00000487245 AQP2P41181 271 aa23.73■■□□□ 1.39
HLA-C-208ENST00000487245 GPLD1P80108 840 aa23.73■■□□□ 1.39
HLA-C-208ENST00000487245 SMAD2Q15796 467 aaKnown RBP23.73■■□□□ 1.39
HLA-C-208ENST00000487245 HLA-DQA1Q5Y7H0 255 aa23.73■■□□□ 1.39
HLA-C-208ENST00000487245 LEG1Q6P5S2 330 aa23.73■■□□□ 1.39
HLA-C-208ENST00000487245 DAZLQ92904 295 aaKnown RBP23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms