RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 OR52E6Q96RD3 313 aa16.75■□□□□ 0.27
SMPDL3A-202ENST00000487215 SORT1Q99523 831 aa16.75■□□□□ 0.27
SMPDL3A-202ENST00000487215 NARFLQ9H6Q4 476 aa16.75■□□□□ 0.27
SMPDL3A-202ENST00000487215 LPAR2Q9HBW0 351 aa16.75■□□□□ 0.27
SMPDL3A-202ENST00000487215 HIF1ANQ9NWT6 349 aa16.75■□□□□ 0.27
SMPDL3A-202ENST00000487215 USP22Q9UPT9 525 aa16.75■□□□□ 0.27
SMPDL3A-202ENST00000487215 SPEF1Q9Y4P9 236 aa16.75■□□□□ 0.27
SMPDL3A-202ENST00000487215 FAM157AC9JC47 383 aa16.74■□□□□ 0.27
SMPDL3A-202ENST00000487215 M0R233 179 aa16.74■□□□□ 0.27
SMPDL3A-202ENST00000487215 SYNGR3O43761 229 aa16.74■□□□□ 0.27
SMPDL3A-202ENST00000487215 BCHEP06276 602 aa16.74■□□□□ 0.27
SMPDL3A-202ENST00000487215 NR4A1P22736 598 aa16.74■□□□□ 0.27
SMPDL3A-202ENST00000487215 GTF2E2P29084 291 aaKnown RBP16.74■□□□□ 0.27
SMPDL3A-202ENST00000487215 GPR6P46095 362 aaPredicted RBP16.74■□□□□ 0.27
SMPDL3A-202ENST00000487215 COMPP49747 757 aaPredicted RBP16.74■□□□□ 0.27
SMPDL3A-202ENST00000487215 MVDP53602 400 aa16.74■□□□□ 0.27
SMPDL3A-202ENST00000487215 EGR4Q05215 589 aa16.74■□□□□ 0.27
SMPDL3A-202ENST00000487215 RPS26P11Q5JNZ5 115 aaPredicted RBP16.74■□□□□ 0.27
SMPDL3A-202ENST00000487215 OGFOD2Q6N063 350 aa16.74■□□□□ 0.27
SMPDL3A-202ENST00000487215 CCDC36Q8IYA8 594 aa16.74■□□□□ 0.27
SMPDL3A-202ENST00000487215 KTI12Q96EK9 354 aaPredicted RBP16.74■□□□□ 0.27
SMPDL3A-202ENST00000487215 OXGR1Q96P68 337 aa16.74■□□□□ 0.27
SMPDL3A-202ENST00000487215 RACGAP1Q9H0H5 632 aa16.74■□□□□ 0.27
SMPDL3A-202ENST00000487215 AIG1Q9NVV5 245 aa16.74■□□□□ 0.27
SMPDL3A-202ENST00000487215 CALML5Q9NZT1 146 aa16.74■□□□□ 0.27
SMPDL3A-202ENST00000487215 REV1Q9UBZ9 1251 aa16.74■□□□□ 0.27
SMPDL3A-202ENST00000487215 FZD7O75084 574 aa16.73■□□□□ 0.27
SMPDL3A-202ENST00000487215 RGS9O75916 674 aaPredicted RBP16.73■□□□□ 0.27
SMPDL3A-202ENST00000487215 KRT75O95678 551 aa16.73■□□□□ 0.27
SMPDL3A-202ENST00000487215 HPXP02790 462 aa16.73■□□□□ 0.27
SMPDL3A-202ENST00000487215 MSMBP08118 114 aa16.73■□□□□ 0.27
SMPDL3A-202ENST00000487215 ETFAP13804 333 aa16.73■□□□□ 0.27
SMPDL3A-202ENST00000487215 EGR1P18146 543 aa16.73■□□□□ 0.27
SMPDL3A-202ENST00000487215 TCN1P20061 433 aaPredicted RBP16.73■□□□□ 0.27
SMPDL3A-202ENST00000487215 COL8A2P25067 703 aa16.73■□□□□ 0.27
SMPDL3A-202ENST00000487215 EVX1P49640 407 aa16.73■□□□□ 0.27
SMPDL3A-202ENST00000487215 CRISP3P54108 245 aa16.73■□□□□ 0.27
SMPDL3A-202ENST00000487215 LRRC74AQ0VAA2 488 aa16.73■□□□□ 0.27
SMPDL3A-202ENST00000487215 LARS2Q15031 903 aaKnown RBP16.73■□□□□ 0.27
SMPDL3A-202ENST00000487215 SLC9B1Q4ZJI4 515 aa16.73■□□□□ 0.27
SMPDL3A-202ENST00000487215 CROCCP2Q86T23 111 aa16.73■□□□□ 0.27
SMPDL3A-202ENST00000487215 PIK3C3Q8NEB9 887 aa16.73■□□□□ 0.27
SMPDL3A-202ENST00000487215 ZMYND19Q96E35 227 aaPredicted RBP16.73■□□□□ 0.27
SMPDL3A-202ENST00000487215 MS4A3Q96HJ5 214 aa16.73■□□□□ 0.27
SMPDL3A-202ENST00000487215 OR2M2Q96R28 347 aa16.73■□□□□ 0.27
SMPDL3A-202ENST00000487215 SPATA9Q9BWV2 254 aa16.73■□□□□ 0.27
SMPDL3A-202ENST00000487215 MEAF6Q9HAF1 191 aa16.73■□□□□ 0.27
SMPDL3A-202ENST00000487215 SLC6A13Q9NSD5 602 aa16.73■□□□□ 0.27
SMPDL3A-202ENST00000487215 B3GNT2Q9NY97 397 aa16.73■□□□□ 0.27
SMPDL3A-202ENST00000487215 GRIP1Q9Y3R0 1128 aa16.73■□□□□ 0.27
SMPDL3A-202ENST00000487215 ZNF99A8MXY4 864 aaPredicted RBP16.72■□□□□ 0.27
SMPDL3A-202ENST00000487215 WNT9BO14905 357 aa16.72■□□□□ 0.27
SMPDL3A-202ENST00000487215 HLA-HP01893 362 aa16.72■□□□□ 0.27
SMPDL3A-202ENST00000487215 SAGP10523 405 aaPredicted RBP16.72■□□□□ 0.27
SMPDL3A-202ENST00000487215 SLC1A6P48664 564 aa16.72■□□□□ 0.27
SMPDL3A-202ENST00000487215 C1DQ13901 141 aaKnown RBP16.72■□□□□ 0.27
SMPDL3A-202ENST00000487215 PHYHD1Q5SRE7 291 aa16.72■□□□□ 0.27
SMPDL3A-202ENST00000487215 SHQ1Q6PI26 577 aaKnown RBP16.72■□□□□ 0.27
SMPDL3A-202ENST00000487215 TMEM123Q8N131 208 aa16.72■□□□□ 0.27
SMPDL3A-202ENST00000487215 ZNF418Q8TF45 676 aaPredicted RBP16.72■□□□□ 0.27
SMPDL3A-202ENST00000487215 SLC38A5Q8WUX1 472 aa16.72■□□□□ 0.27
SMPDL3A-202ENST00000487215 LRRC37BQ96QE4 947 aa16.72■□□□□ 0.27
SMPDL3A-202ENST00000487215 SYT3Q9BQG1 590 aa16.72■□□□□ 0.27
SMPDL3A-202ENST00000487215 MS4A5Q9H3V2 200 aa16.72■□□□□ 0.27
SMPDL3A-202ENST00000487215 HAO1Q9UJM8 370 aa16.72■□□□□ 0.27
SMPDL3A-202ENST00000487215 TMEM89A2RUT3 159 aa16.71■□□□□ 0.27
SMPDL3A-202ENST00000487215 M0R082 166 aa16.71■□□□□ 0.27
SMPDL3A-202ENST00000487215 M0R3G1 203 aa16.71■□□□□ 0.27
SMPDL3A-202ENST00000487215 RFXANKO14593 260 aa16.71■□□□□ 0.27
SMPDL3A-202ENST00000487215 AIM2O14862 343 aa16.71■□□□□ 0.27
SMPDL3A-202ENST00000487215 TRAF3IP2O43734 574 aaPredicted RBP16.71■□□□□ 0.27
SMPDL3A-202ENST00000487215 TFP02787 698 aa16.71■□□□□ 0.27
SMPDL3A-202ENST00000487215 ACHEP22303 614 aa16.71■□□□□ 0.27
SMPDL3A-202ENST00000487215 CRATP43155 626 aa16.71■□□□□ 0.27
SMPDL3A-202ENST00000487215 ALDH3B1P43353 468 aa16.71■□□□□ 0.27
SMPDL3A-202ENST00000487215 SEC24CP53992 1094 aa16.71■□□□□ 0.27
SMPDL3A-202ENST00000487215 DSTNP60981 165 aa16.71■□□□□ 0.27
SMPDL3A-202ENST00000487215 HOXC5Q00444 222 aa16.71■□□□□ 0.27
SMPDL3A-202ENST00000487215 SCGB2A2Q13296 93 aa16.71■□□□□ 0.27
SMPDL3A-202ENST00000487215 GSG1Q2KHT4 349 aa16.71■□□□□ 0.27
SMPDL3A-202ENST00000487215 THSD4Q6ZMP0 1018 aa16.71■□□□□ 0.27
SMPDL3A-202ENST00000487215 C3orf56Q8N813 242 aa16.71■□□□□ 0.27
SMPDL3A-202ENST00000487215 ZNF417Q8TAU3 575 aa16.71■□□□□ 0.27
SMPDL3A-202ENST00000487215 RDH5Q92781 318 aa16.71■□□□□ 0.27
SMPDL3A-202ENST00000487215 TMEM19Q96HH6 336 aa16.71■□□□□ 0.27
SMPDL3A-202ENST00000487215 ZNF587Q96SQ5 575 aaPredicted RBP16.71■□□□□ 0.27
SMPDL3A-202ENST00000487215 PNPOQ9NVS9 261 aa16.71■□□□□ 0.27
SMPDL3A-202ENST00000487215 TREM2Q9NZC2 230 aa16.71■□□□□ 0.27
SMPDL3A-202ENST00000487215 DYSFO75923 2080 aa16.71■□□□□ 0.27
SMPDL3A-202ENST00000487215 MEGF8Q7Z7M0 2845 aa16.7■□□□□ 0.26
SMPDL3A-202ENST00000487215 AKAP8O43823 692 aaKnown RBP16.7■□□□□ 0.26
SMPDL3A-202ENST00000487215 GAAP10253 952 aa16.7■□□□□ 0.26
SMPDL3A-202ENST00000487215 CD79AP11912 226 aa16.7■□□□□ 0.26
SMPDL3A-202ENST00000487215 ZNF35P13682 527 aa16.7■□□□□ 0.26
SMPDL3A-202ENST00000487215 ZNF14P17017 642 aaPredicted RBP16.7■□□□□ 0.26
SMPDL3A-202ENST00000487215 GLRXP35754 106 aa16.7■□□□□ 0.26
SMPDL3A-202ENST00000487215 HILS1P60008 231 aa16.7■□□□□ 0.26
SMPDL3A-202ENST00000487215 STX3Q13277 289 aa16.7■□□□□ 0.26
SMPDL3A-202ENST00000487215 MAD2L1BPQ15013 274 aaPredicted RBP16.7■□□□□ 0.26
SMPDL3A-202ENST00000487215 C6orf89Q6UWU4 347 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms